SCV
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.52Å | 1.52Å | |
C1 | O1 | doub | 1.22Å | 1.44Å | |
C1 | O2 | sing | 1.36Å | 1.45Å | |
C2 | C3 | sing | 1.54Å | 1.55Å | |
C2 | N1 | sing | 1.46Å | 1.50Å | |
C2 | HC2 | sing | 1.10Å | 1.12Å | |
C3 | C4 | sing | 1.53Å | 1.55Å | |
C3 | HC31 | sing | 1.10Å | 1.12Å | |
C3 | HC32 | sing | 1.10Å | 1.12Å | |
C4 | C5 | sing | 1.53Å | 1.54Å | |
C4 | HC41 | sing | 1.10Å | 1.11Å | |
C4 | HC42 | sing | 1.10Å | 1.12Å | |
C7 | N2 | sing | 1.44Å | 1.46Å | |
C7 | C8 | sing | 1.52Å | 1.53Å | |
C7 | C9 | sing | 1.51Å | 1.49Å | |
C7 | HC7 | sing | 1.09Å | 1.11Å | |
C10 | C12 | sing | 1.54Å | 1.55Å | |
C10 | O5 | sing | 1.43Å | 1.47Å | |
C10 | C11 | sing | 1.52Å | 1.54Å | |
C10 | HC01 | sing | 1.10Å | 1.12Å | |
C12 | C13 | sing | 1.53Å | 1.53Å | |
C12 | C14 | sing | 1.53Å | 1.54Å | |
C12 | HC21 | sing | 1.10Å | 1.11Å | |
C13 | H131 | sing | 1.09Å | 1.12Å | |
C13 | H132 | sing | 1.10Å | 1.12Å | |
C13 | H133 | sing | 1.10Å | 1.12Å | |
C5 | C6 | sing | 1.52Å | 1.53Å | |
C5 | HC51 | sing | 1.10Å | 1.11Å | |
C5 | HC52 | sing | 1.10Å | 1.12Å | |
N1 | HN11 | sing | 1.00Å | 1.02Å | |
N1 | HN12 | sing | 1.00Å | 1.02Å | |
O2 | HO2 | sing | 0.98Å | 0.95Å | |
O5 | C8 | sing | 1.36Å | 1.34Å | |
C11 | O6 | sing | 1.36Å | 1.26Å | |
C11 | O7 | doub | 1.22Å | 1.25Å | |
C14 | H141 | sing | 1.10Å | 1.12Å | |
C14 | H142 | sing | 1.10Å | 1.12Å | |
C14 | H143 | sing | 1.09Å | 1.11Å | |
O6 | HO6 | sing | 0.98Å | 0.95Å | |
C6 | O3 | doub | 1.23Å | 1.25Å | |
C6 | N2 | sing | 1.39Å | 1.34Å | |
N2 | HN2 | sing | 1.02Å | 1.02Å | |
O4 | C8 | doub | 1.23Å | 1.24Å | |
C9 | O8 | doub | 1.23Å | 1.21Å | |
C9 | S | sing | 1.76Å | 1.79Å | |
HS1 | S | sing | 1.34Å | 1.30Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O1 | 133.2° | 126.3° |
C2 | C1 | O2 | 123.0° | 110.5° |
C1 | C2 | C3 | 102.6° | 112.1° |
C1 | C2 | N1 | 96.7° | 108.2° |
C1 | C2 | HC2 | 113.2° | 107.5° |
O1 | C1 | O2 | 103.8° | 123.2° |
C1 | O2 | HO2 | 123.0° | 111.9° |
C3 | C2 | N1 | 116.3° | 111.5° |
C3 | C2 | HC2 | 113.2° | 109.4° |
C2 | C3 | C4 | 108.8° | 114.5° |
C2 | C3 | HC31 | 112.4° | 108.8° |
C2 | C3 | HC32 | 112.5° | 109.2° |
N1 | C2 | HC2 | 113.2° | 107.8° |
C2 | N1 | HN11 | 96.7° | 118.0° |
C2 | N1 | HN12 | 117.2° | 118.0° |
C4 | C3 | HC31 | 112.4° | 108.9° |
C4 | C3 | HC32 | 112.5° | 108.8° |
C3 | C4 | C5 | 108.4° | 111.1° |
C3 | C4 | HC41 | 112.6° | 110.2° |
C3 | C4 | HC42 | 112.6° | 110.0° |
HC31 | C3 | HC32 | 98.0° | 106.3° |
C5 | C4 | HC41 | 112.6° | 109.3° |
C5 | C4 | HC42 | 112.6° | 109.3° |
C4 | C5 | C6 | 109.9° | 112.4° |
C4 | C5 | HC51 | 112.0° | 109.9° |
C4 | C5 | HC52 | 112.1° | 109.9° |
HC41 | C4 | HC42 | 97.8° | 106.8° |
N2 | C7 | C8 | 106.4° | 112.2° |
N2 | C7 | C9 | 114.8° | 106.4° |
N2 | C7 | HC7 | 111.8° | 105.7° |
C7 | N2 | C6 | 124.1° | 122.1° |
C7 | N2 | HN2 | 118.0° | 118.2° |
C8 | C7 | C9 | 99.6° | 112.7° |
C8 | C7 | HC7 | 111.8° | 107.9° |
C7 | C8 | O5 | 114.7° | 112.1° |
C7 | C8 | O4 | 122.6° | 122.7° |
C9 | C7 | HC7 | 111.7° | 111.8° |
C7 | C9 | O8 | 118.4° | 124.1° |
C7 | C9 | S | 115.7° | 114.8° |
C12 | C10 | O5 | 107.2° | 109.9° |
C12 | C10 | C11 | 123.5° | 112.9° |
C12 | C10 | HC01 | 105.4° | 111.9° |
C10 | C12 | C13 | 98.5° | 110.9° |
C10 | C12 | C14 | 121.0° | 112.5° |
C10 | C12 | HC21 | 108.6° | 108.9° |
O5 | C10 | C11 | 108.7° | 105.3° |
O5 | C10 | HC01 | 105.3° | 106.7° |
C10 | O5 | C8 | 123.6° | 115.7° |
C11 | C10 | HC01 | 105.4° | 109.8° |
C10 | C11 | O6 | 117.7° | 112.5° |
C10 | C11 | O7 | 116.8° | 124.6° |
C13 | C12 | C14 | 110.7° | 109.3° |
C13 | C12 | HC21 | 108.6° | 107.1° |
C12 | C13 | H131 | 98.5° | 111.4° |
C12 | C13 | H132 | 116.4° | 111.2° |
C12 | C13 | H133 | 116.5° | 110.8° |
C14 | C12 | HC21 | 108.6° | 108.0° |
C12 | C14 | H141 | 121.0° | 111.3° |
C12 | C14 | H142 | 108.1° | 110.9° |
C12 | C14 | H143 | 108.1° | 111.3° |
H131 | C13 | H132 | 116.4° | 108.1° |
H131 | C13 | H133 | 116.5° | 107.2° |
H132 | C13 | H133 | 93.9° | 108.0° |
C6 | C5 | HC51 | 112.1° | 108.2° |
C6 | C5 | HC52 | 112.1° | 108.2° |
C5 | C6 | O3 | 122.4° | 123.4° |
C5 | C6 | N2 | 114.2° | 111.7° |
HC51 | C5 | HC52 | 98.3° | 108.0° |
HN11 | N1 | HN12 | 117.2° | 122.6° |
O5 | C8 | O4 | 121.8° | 125.2° |
O6 | C11 | O7 | 124.1° | 122.9° |
C11 | O6 | HO6 | 117.7° | 115.3° |
H141 | C14 | H142 | 108.1° | 107.9° |
H141 | C14 | H143 | 108.1° | 108.3° |
H142 | C14 | H143 | 101.8° | 107.0° |
O3 | C6 | N2 | 120.7° | 125.0° |
C6 | N2 | HN2 | 118.0° | 119.7° |
O8 | C9 | S | 125.5° | 121.1° |
C9 | S | HS1 | 109.5° | 96.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O1 | O2 | 179.8° | 179.2° |
C1 | C2 | C3 | N1 | 104.1° | 121.6° |
C1 | C2 | C3 | HC2 | 122.3° | 119.2° |
C1 | C2 | N1 | HC2 | 118.8° | 116.0° |
C1 | C2 | C3 | C4 | 172.2° | 57.8° |
C1 | C2 | C3 | HC31 | 62.6° | 180.0° |
C1 | C2 | C3 | HC32 | 46.9° | 64.4° |
C1 | C2 | N1 | HN11 | 180.0° | 32.9° |
C1 | C2 | N1 | HN12 | 54.8° | 133.8° |
C2 | C1 | O2 | HO2 | 180.0° | 179.2° |
O1 | C1 | C2 | C3 | 112.5° | 119.7° |
O1 | C1 | C2 | N1 | 6.4° | 3.8° |
O1 | C1 | C2 | HC2 | 125.2° | 120.0° |
O1 | C1 | O2 | HO2 | 0.2° | 0.0° |
O2 | C1 | C2 | C3 | 67.2° | 61.1° |
O2 | C1 | C2 | N1 | 173.8° | 175.5° |
O2 | C1 | C2 | HC2 | 55.0° | 59.2° |
C3 | C2 | N1 | HC2 | 133.6° | 120.1° |
C2 | C3 | C4 | HC31 | 125.3° | 122.1° |
C2 | C3 | C4 | HC32 | 125.3° | 122.4° |
C2 | C3 | HC31 | HC32 | 118.4° | 117.4° |
C2 | C3 | C4 | C5 | 177.6° | 177.8° |
C2 | C3 | C4 | HC41 | 52.4° | 60.9° |
C2 | C3 | C4 | HC42 | 57.1° | 56.6° |
C3 | C2 | N1 | HN11 | 72.4° | 91.0° |
C3 | C2 | N1 | HN12 | 52.9° | 102.4° |
N1 | C2 | C3 | C4 | 68.0° | 63.8° |
N1 | C2 | C3 | HC31 | 166.7° | 58.4° |
N1 | C2 | C3 | HC32 | 57.3° | 174.0° |
C2 | N1 | HN11 | HN12 | 125.3° | 166.0° |
HC2 | C2 | C3 | C4 | 65.6° | 177.0° |
HC2 | C2 | C3 | HC31 | 59.7° | 60.8° |
HC2 | C2 | C3 | HC32 | 169.2° | 54.8° |
HC2 | C2 | N1 | HN11 | 61.2° | 148.9° |
HC2 | C2 | N1 | HN12 | 173.5° | 17.7° |
C4 | C3 | HC31 | HC32 | 118.4° | 117.1° |
C3 | C4 | C5 | HC41 | 125.3° | 121.9° |
C3 | C4 | C5 | HC42 | 125.3° | 121.6° |
C3 | C4 | HC41 | HC42 | 118.5° | 119.5° |
C3 | C4 | C5 | C6 | 177.9° | 178.1° |
C3 | C4 | C5 | HC51 | 52.6° | 57.5° |
C3 | C4 | C5 | HC52 | 56.8° | 61.2° |
HC31 | C3 | C4 | C5 | 57.1° | 60.1° |
HC31 | C3 | C4 | HC41 | 177.6° | 61.2° |
HC31 | C3 | C4 | HC42 | 68.2° | 178.7° |
HC32 | C3 | C4 | C5 | 52.3° | 55.4° |
HC32 | C3 | C4 | HC41 | 72.9° | 176.7° |
HC32 | C3 | C4 | HC42 | 177.6° | 65.8° |
C5 | C4 | HC41 | HC42 | 118.5° | 118.1° |
C4 | C5 | C6 | HC51 | 125.3° | 121.6° |
C4 | C5 | C6 | HC52 | 125.3° | 121.6° |
C4 | C5 | HC51 | HC52 | 118.0° | 119.9° |
C4 | C5 | C6 | O3 | 63.2° | 0.0° |
C4 | C5 | C6 | N2 | 98.1° | 180.0° |
HC41 | C4 | C5 | C6 | 56.8° | 60.0° |
HC41 | C4 | C5 | HC51 | 177.9° | 179.4° |
HC41 | C4 | C5 | HC52 | 68.5° | 60.7° |
HC42 | C4 | C5 | C6 | 52.6° | 56.6° |
HC42 | C4 | C5 | HC51 | 72.7° | 64.0° |
HC42 | C4 | C5 | HC52 | 177.9° | 177.2° |
N2 | C7 | C8 | C9 | 119.6° | 120.1° |
N2 | C7 | C8 | HC7 | 122.3° | 116.0° |
N2 | C7 | C9 | HC7 | 128.7° | 114.9° |
C7 | N2 | C6 | C5 | 177.9° | 180.0° |
N2 | C7 | C8 | O5 | 167.5° | 1.4° |
C7 | N2 | C6 | O3 | 16.2° | 0.1° |
C7 | N2 | C6 | HN2 | 180.0° | 179.2° |
N2 | C7 | C8 | O4 | 23.6° | 176.0° |
N2 | C7 | C9 | O8 | 161.2° | 35.1° |
N2 | C7 | C9 | S | 25.2° | 146.6° |
C8 | C7 | C9 | HC7 | 118.2° | 121.7° |
C7 | C8 | O5 | C10 | 177.1° | 177.4° |
C7 | C8 | O5 | O4 | 169.0° | 177.4° |
C8 | C7 | N2 | C6 | 127.4° | 87.4° |
C8 | C7 | N2 | HN2 | 52.6° | 93.3° |
C8 | C7 | C9 | O8 | 85.7° | 88.3° |
C8 | C7 | C9 | S | 87.9° | 90.0° |
C9 | C7 | C8 | O5 | 47.9° | 118.7° |
C9 | C7 | N2 | C6 | 123.5° | 148.9° |
C9 | C7 | N2 | HN2 | 56.5° | 30.3° |
C9 | C7 | C8 | O4 | 143.2° | 63.9° |
C7 | C9 | O8 | S | 172.9° | 178.2° |
C7 | C9 | S | HS1 | 145.3° | 179.1° |
HC7 | C7 | C8 | O5 | 70.3° | 117.4° |
HC7 | C7 | N2 | C6 | 5.2° | 30.0° |
HC7 | C7 | N2 | HN2 | 174.9° | 149.3° |
HC7 | C7 | C8 | O4 | 98.7° | 60.0° |
HC7 | C7 | C9 | O8 | 32.5° | 150.0° |
HC7 | C7 | C9 | S | 153.9° | 31.7° |
C12 | C10 | O5 | C11 | 135.6° | 121.9° |
C12 | C10 | O5 | HC01 | 111.9° | 121.5° |
C12 | C10 | C11 | HC01 | 120.8° | 125.6° |
C10 | C12 | C13 | C14 | 127.8° | 124.6° |
C10 | C12 | C13 | HC21 | 113.0° | 118.7° |
C10 | C12 | C14 | HC21 | 126.5° | 120.2° |
C10 | C12 | C13 | H131 | 180.0° | 60.9° |
C10 | C12 | C13 | H132 | 54.7° | 59.7° |
C10 | C12 | C13 | H133 | 54.7° | 179.8° |
C12 | C10 | O5 | C8 | 92.7° | 178.4° |
C12 | C10 | C11 | O6 | 135.4° | 95.4° |
C12 | C10 | C11 | O7 | 31.8° | 84.4° |
C10 | C12 | C14 | H141 | 180.0° | 56.2° |
C10 | C12 | C14 | H142 | 54.7° | 176.3° |
C10 | C12 | C14 | H143 | 54.7° | 64.8° |
O5 | C10 | C11 | HC01 | 112.5° | 114.5° |
O5 | C10 | C12 | C13 | 86.6° | 65.1° |
O5 | C10 | C12 | C14 | 33.9° | 57.6° |
O5 | C10 | C12 | HC21 | 160.4° | 177.2° |
O5 | C10 | C11 | O6 | 8.7° | 144.7° |
O5 | C10 | C11 | O7 | 158.6° | 35.5° |
C10 | O5 | C8 | O4 | 8.0° | 0.1° |
C11 | C10 | C12 | C13 | 40.8° | 177.6° |
C11 | C10 | C12 | C14 | 161.3° | 59.6° |
C11 | C10 | C12 | HC21 | 72.2° | 60.0° |
C11 | C10 | O5 | C8 | 131.7° | 56.6° |
C10 | C11 | O6 | O7 | 166.2° | 179.7° |
C10 | C11 | O6 | HO6 | 179.9° | 179.7° |
HC01 | C10 | C12 | C13 | 161.6° | 53.1° |
HC01 | C10 | C12 | C14 | 77.9° | 175.9° |
HC01 | C10 | C12 | HC21 | 48.6° | 64.5° |
HC01 | C10 | O5 | C8 | 19.2° | 60.1° |
HC01 | C10 | C11 | O6 | 103.8° | 30.2° |
HC01 | C10 | C11 | O7 | 89.0° | 150.0° |
C13 | C12 | C14 | HC21 | 119.2° | 116.2° |
C12 | C13 | H131 | H132 | 125.2° | 122.4° |
C12 | C13 | H131 | H133 | 125.3° | 121.4° |
C12 | C13 | H132 | H133 | 122.2° | 121.7° |
C13 | C12 | C14 | H141 | 65.7° | 67.5° |
C13 | C12 | C14 | H142 | 169.0° | 52.6° |
C13 | C12 | C14 | H143 | 59.6° | 171.6° |
C14 | C12 | C13 | H131 | 52.1° | 174.5° |
C14 | C12 | C13 | H132 | 73.1° | 64.9° |
C14 | C12 | C13 | H133 | 177.5° | 55.2° |
C12 | C14 | H141 | H142 | 125.3° | 121.8° |
C12 | C14 | H141 | H143 | 125.2° | 122.7° |
C12 | C14 | H142 | H143 | 113.7° | 121.5° |
HC21 | C12 | C13 | H131 | 67.0° | 57.8° |
HC21 | C12 | C13 | H132 | 167.7° | 178.4° |
HC21 | C12 | C13 | H133 | 58.3° | 61.5° |
HC21 | C12 | C14 | H141 | 53.5° | 176.3° |
HC21 | C12 | C14 | H142 | 71.8° | 63.6° |
HC21 | C12 | C14 | H143 | 178.7° | 55.4° |
H131 | C13 | H132 | H133 | 122.2° | 115.7° |
C6 | C5 | HC51 | HC52 | 118.0° | 116.9° |
C5 | C6 | O3 | N2 | 160.2° | 180.0° |
C5 | C6 | N2 | HN2 | 2.1° | 0.7° |
HC51 | C5 | C6 | O3 | 171.5° | 121.6° |
HC51 | C5 | C6 | N2 | 27.1° | 58.4° |
HC52 | C5 | C6 | O3 | 62.0° | 121.6° |
HC52 | C5 | C6 | N2 | 136.6° | 58.3° |
O7 | C11 | O6 | HO6 | 13.7° | 0.0° |
H141 | C14 | H142 | H143 | 113.7° | 116.4° |
O3 | C6 | N2 | HN2 | 163.8° | 179.3° |
O8 | C9 | S | HS1 | 27.8° | 0.8° |