SAM
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.52Å | |
| N | HN1 | sing | 1.01Å | 1.02Å | |
| N | HN2 | sing | 1.01Å | 1.02Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.12Å | |
| C | O | doub | 1.22Å | 1.25Å | |
| C | OXT | sing | 1.22Å | 1.25Å | |
| CB | CG | sing | 1.53Å | 1.52Å | |
| CB | HB1 | sing | 1.09Å | 1.12Å | |
| CB | HB2 | sing | 1.09Å | 1.12Å | |
| CG | SD | sing | 1.81Å | 1.83Å | |
| CG | HG1 | sing | 1.09Å | 1.12Å | |
| CG | HG2 | sing | 1.09Å | 1.11Å | |
| SD | CE | sing | 1.81Å | 1.78Å | |
| SD | C5' | sing | 1.81Å | 1.82Å | |
| CE | HE1 | sing | 1.09Å | 1.11Å | |
| CE | HE2 | sing | 1.09Å | 1.12Å | |
| CE | HE3 | sing | 1.09Å | 1.11Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C4' | C3' | sing | 1.54Å | 1.53Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.45Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.55Å | 1.54Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.38Å | |
| C2' | C1' | sing | 1.55Å | 1.49Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.47Å | 1.44Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| N9 | C8 | sing | 1.36Å | 1.37Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.38Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.32Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.35Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.40Å | 1.42Å | Aromatic |
| C5 | C4 | doub | 1.41Å | 1.38Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.35Å | |
| C6 | N1 | doub | 1.33Å | 1.30Å | Aromatic |
| N6 | HN61 | sing | 0.97Å | 1.02Å | |
| N6 | HN62 | sing | 0.97Å | 1.02Å | |
| N1 | C2 | sing | 1.32Å | 1.36Å | Aromatic |
| C2 | N3 | doub | 1.32Å | 1.31Å | Aromatic |
| C2 | H2 | sing | 1.08Å | 1.10Å | |
| N3 | C4 | sing | 1.33Å | 1.36Å | Aromatic |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | HN1 | 109.5° | 106.7° |
| CA | N | HN2 | 112.2° | 106.7° |
| N | CA | C | 109.4° | 109.5° |
| N | CA | CB | 108.9° | 109.5° |
| N | CA | HA | 111.3° | 109.5° |
| HN1 | N | HN2 | 112.2° | 106.7° |
| C | CA | CB | 113.5° | 109.5° |
| C | CA | HA | 106.6° | 109.5° |
| CA | C | O | 114.3° | 120.0° |
| CA | C | OXT | 130.1° | 120.0° |
| CB | CA | HA | 107.1° | 109.5° |
| CA | CB | CG | 120.4° | 109.5° |
| CA | CB | HB1 | 108.3° | 109.5° |
| CA | CB | HB2 | 108.3° | 109.5° |
| O | C | OXT | 115.4° | 120.0° |
| CG | CB | HB1 | 108.3° | 109.4° |
| CG | CB | HB2 | 108.3° | 109.4° |
| CB | CG | SD | 111.3° | 109.5° |
| CB | CG | HG1 | 111.5° | 109.5° |
| CB | CG | HG2 | 111.5° | 109.5° |
| HB1 | CB | HB2 | 101.6° | 109.5° |
| SD | CG | HG1 | 111.5° | 109.5° |
| SD | CG | HG2 | 111.6° | 109.4° |
| CG | SD | CE | 102.1° | 100.0° |
| CG | SD | C5' | 99.8° | 100.0° |
| HG1 | CG | HG2 | 98.8° | 109.4° |
| CE | SD | C5' | 102.7° | 100.0° |
| SD | CE | HE1 | 102.1° | 109.5° |
| SD | CE | HE2 | 115.0° | 109.5° |
| SD | CE | HE3 | 115.0° | 109.5° |
| SD | C5' | C4' | 110.1° | 109.5° |
| SD | C5' | H5'1 | 112.0° | 109.4° |
| SD | C5' | H5'2 | 112.0° | 109.4° |
| HE1 | CE | HE2 | 115.1° | 109.4° |
| HE1 | CE | HE3 | 115.0° | 109.5° |
| HE2 | CE | HE3 | 95.5° | 109.5° |
| C4' | C5' | H5'1 | 112.0° | 109.5° |
| C4' | C5' | H5'2 | 112.0° | 109.5° |
| C5' | C4' | O4' | 109.4° | 109.9° |
| C5' | C4' | C3' | 116.8° | 109.9° |
| C5' | C4' | H4' | 101.9° | 109.9° |
| H5'1 | C5' | H5'2 | 98.4° | 109.5° |
| O4' | C4' | C3' | 99.2° | 107.4° |
| O4' | C4' | H4' | 118.8° | 109.9° |
| C4' | O4' | C1' | 104.5° | 107.0° |
| C3' | C4' | H4' | 111.6° | 109.8° |
| C4' | C3' | O3' | 109.4° | 110.8° |
| C4' | C3' | C2' | 106.1° | 104.0° |
| C4' | C3' | H3' | 110.2° | 110.5° |
| O4' | C1' | C2' | 110.2° | 103.5° |
| O4' | C1' | N9 | 105.3° | 110.6° |
| O4' | C1' | H1' | 111.4° | 110.7° |
| O3' | C3' | C2' | 104.6° | 110.5° |
| O3' | C3' | H3' | 111.5° | 110.4° |
| C3' | O3' | HO3' | 109.4° | 106.8° |
| C2' | C3' | H3' | 114.6° | 110.5° |
| C3' | C2' | O2' | 115.6° | 110.8° |
| C3' | C2' | C1' | 99.5° | 102.1° |
| C3' | C2' | H2' | 116.1° | 110.9° |
| O2' | C2' | C1' | 119.1° | 110.9° |
| O2' | C2' | H2' | 95.2° | 110.8° |
| C2' | O2' | HO2' | 115.6° | 106.8° |
| C1' | C2' | H2' | 112.5° | 111.0° |
| C2' | C1' | N9 | 108.4° | 110.7° |
| C2' | C1' | H1' | 108.4° | 110.6° |
| N9 | C1' | H1' | 113.1° | 110.5° |
| C1' | N9 | C8 | 117.1° | 126.3° |
| C1' | N9 | C4 | 133.4° | 126.3° |
| C8 | N9 | C4 | 109.4° | 107.4° |
| N9 | C8 | N7 | 109.7° | 110.0° |
| N9 | C8 | H8 | 126.6° | 125.0° |
| N9 | C4 | C5 | 103.4° | 106.0° |
| N9 | C4 | N3 | 131.5° | 134.9° |
| N7 | C8 | H8 | 123.7° | 125.0° |
| C8 | N7 | C5 | 105.9° | 109.4° |
| N7 | C5 | C6 | 129.7° | 134.7° |
| N7 | C5 | C4 | 111.6° | 107.1° |
| C6 | C5 | C4 | 118.7° | 118.2° |
| C5 | C6 | N6 | 124.7° | 120.8° |
| C5 | C6 | N1 | 114.3° | 118.5° |
| C5 | C4 | N3 | 125.0° | 119.0° |
| N6 | C6 | N1 | 121.0° | 120.8° |
| C6 | N6 | HN61 | 124.6° | 120.0° |
| C6 | N6 | HN62 | 106.8° | 120.0° |
| C6 | N1 | C2 | 124.6° | 121.2° |
| HN61 | N6 | HN62 | 106.9° | 120.0° |
| N1 | C2 | N3 | 124.2° | 122.5° |
| N1 | C2 | H2 | 120.0° | 118.8° |
| N3 | C2 | H2 | 115.8° | 118.8° |
| C2 | N3 | C4 | 113.0° | 120.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | HN1 | HN2 | 125.3° | 113.8° |
| N | CA | C | CB | 121.9° | 120.0° |
| N | CA | C | HA | 120.5° | 120.0° |
| N | CA | CB | HA | 120.5° | 120.0° |
| N | CA | C | O | 17.3° | 30.0° |
| N | CA | C | OXT | 158.3° | 150.0° |
| N | CA | CB | CG | 168.9° | 65.0° |
| N | CA | CB | HB1 | 65.8° | 175.0° |
| N | CA | CB | HB2 | 43.6° | 55.0° |
| HN1 | N | CA | C | 180.0° | 53.8° |
| HN1 | N | CA | CB | 55.4° | 173.8° |
| HN1 | N | CA | HA | 62.4° | 66.2° |
| HN2 | N | CA | C | 54.8° | 60.1° |
| HN2 | N | CA | CB | 69.8° | 59.9° |
| HN2 | N | CA | HA | 172.3° | 180.0° |
| C | CA | CB | HA | 117.3° | 120.0° |
| CA | C | O | OXT | 176.3° | 180.0° |
| C | CA | CB | CG | 46.8° | 175.0° |
| C | CA | CB | HB1 | 172.0° | 55.1° |
| C | CA | CB | HB2 | 78.5° | 65.0° |
| CB | CA | C | O | 104.5° | 90.0° |
| CB | CA | C | OXT | 79.8° | 90.0° |
| CA | CB | CG | HB1 | 125.3° | 120.0° |
| CA | CB | CG | HB2 | 125.3° | 120.1° |
| CA | CB | HB1 | HB2 | 114.0° | 120.1° |
| CA | CB | CG | SD | 46.2° | 180.0° |
| CA | CB | CG | HG1 | 171.4° | 60.0° |
| CA | CB | CG | HG2 | 79.1° | 60.0° |
| HA | CA | C | O | 137.8° | 150.0° |
| HA | CA | C | OXT | 37.8° | 30.0° |
| HA | CA | CB | CG | 70.6° | 55.0° |
| HA | CA | CB | HB1 | 54.7° | 65.0° |
| HA | CA | CB | HB2 | 164.1° | 175.0° |
| CG | CB | HB1 | HB2 | 113.9° | 119.9° |
| CB | CG | SD | HG1 | 125.3° | 120.1° |
| CB | CG | SD | HG2 | 125.3° | 120.0° |
| CB | CG | HG1 | HG2 | 117.4° | 120.0° |
| CB | CG | SD | CE | 144.5° | 77.9° |
| CB | CG | SD | C5' | 110.1° | 180.0° |
| HB1 | CB | CG | SD | 79.1° | 60.0° |
| HB1 | CB | CG | HG1 | 46.2° | 180.0° |
| HB1 | CB | CG | HG2 | 155.6° | 60.0° |
| HB2 | CB | CG | SD | 171.5° | 60.0° |
| HB2 | CB | CG | HG1 | 63.3° | 60.1° |
| HB2 | CB | CG | HG2 | 46.2° | 180.0° |
| SD | CG | HG1 | HG2 | 117.5° | 120.0° |
| CG | SD | CE | C5' | 103.1° | 102.1° |
| CG | SD | CE | HE1 | 180.0° | 180.0° |
| CG | SD | CE | HE2 | 54.7° | 60.0° |
| CG | SD | CE | HE3 | 54.7° | 60.0° |
| CG | SD | C5' | C4' | 171.1° | 180.0° |
| CG | SD | C5' | H5'1 | 63.6° | 60.0° |
| CG | SD | C5' | H5'2 | 45.8° | 60.0° |
| HG1 | CG | SD | CE | 90.2° | 42.2° |
| HG1 | CG | SD | C5' | 15.2° | 59.9° |
| HG2 | CG | SD | CE | 19.3° | 162.1° |
| HG2 | CG | SD | C5' | 124.7° | 60.0° |
| SD | CE | HE1 | HE2 | 125.2° | 120.0° |
| SD | CE | HE1 | HE3 | 125.3° | 120.0° |
| SD | CE | HE2 | HE3 | 120.8° | 120.0° |
| CE | SD | C5' | C4' | 66.2° | 77.9° |
| CE | SD | C5' | H5'1 | 168.6° | 162.1° |
| CE | SD | C5' | H5'2 | 59.1° | 42.2° |
| C5' | SD | CE | HE1 | 76.9° | 77.8° |
| C5' | SD | CE | HE2 | 48.4° | 42.1° |
| C5' | SD | CE | HE3 | 157.8° | 162.1° |
| SD | C5' | C4' | H5'1 | 125.3° | 120.0° |
| SD | C5' | C4' | H5'2 | 125.3° | 120.0° |
| SD | C5' | H5'1 | H5'2 | 117.9° | 119.9° |
| SD | C5' | C4' | O4' | 35.2° | 66.7° |
| SD | C5' | C4' | C3' | 146.8° | 175.3° |
| SD | C5' | C4' | H4' | 91.3° | 54.3° |
| HE1 | CE | HE2 | HE3 | 120.9° | 120.0° |
| C4' | C5' | H5'1 | H5'2 | 117.9° | 120.0° |
| C5' | C4' | O4' | C3' | 122.8° | 119.5° |
| C5' | C4' | O4' | H4' | 116.2° | 121.0° |
| C5' | C4' | C3' | H4' | 116.6° | 121.0° |
| C5' | C4' | O4' | C1' | 166.6° | 146.0° |
| C5' | C4' | C3' | O3' | 89.0° | 119.9° |
| C5' | C4' | C3' | C2' | 158.7° | 121.4° |
| C5' | C4' | C3' | H3' | 34.0° | 2.8° |
| H5'1 | C5' | C4' | O4' | 90.0° | 53.3° |
| H5'1 | C5' | C4' | C3' | 21.6° | 64.7° |
| H5'1 | C5' | C4' | H4' | 143.5° | 174.3° |
| H5'2 | C5' | C4' | O4' | 160.5° | 173.3° |
| H5'2 | C5' | C4' | C3' | 87.9° | 55.3° |
| H5'2 | C5' | C4' | H4' | 34.0° | 65.7° |
| O4' | C4' | C3' | H4' | 126.1° | 119.4° |
| O4' | C4' | C3' | O3' | 153.7° | 120.6° |
| O4' | C4' | C3' | C2' | 41.4° | 1.9° |
| O4' | C4' | C3' | H3' | 83.3° | 116.7° |
| C4' | O4' | C1' | C2' | 32.6° | 40.1° |
| C4' | O4' | C1' | N9 | 149.3° | 158.7° |
| C4' | O4' | C1' | H1' | 87.7° | 78.5° |
| C3' | C4' | O4' | C1' | 43.9° | 26.4° |
| C4' | C3' | O3' | C2' | 113.3° | 114.7° |
| C4' | C3' | O3' | H3' | 122.2° | 122.7° |
| C4' | C3' | C2' | H3' | 121.9° | 118.6° |
| C4' | C3' | O3' | HO3' | 180.0° | 176.3° |
| C4' | C3' | C2' | O2' | 106.9° | 139.2° |
| C4' | C3' | C2' | C1' | 21.9° | 21.0° |
| C4' | C3' | C2' | H2' | 142.8° | 97.2° |
| H4' | C4' | O4' | C1' | 77.2° | 93.0° |
| H4' | C4' | C3' | O3' | 27.6° | 1.1° |
| H4' | C4' | C3' | C2' | 84.7° | 117.6° |
| H4' | C4' | C3' | H3' | 150.6° | 123.9° |
| O4' | C1' | C2' | C3' | 5.4° | 37.1° |
| O4' | C1' | C2' | O2' | 131.9° | 155.2° |
| O4' | C1' | C2' | N9 | 114.8° | 118.6° |
| O4' | C1' | C2' | H1' | 122.1° | 118.6° |
| O4' | C1' | C2' | H2' | 118.1° | 81.1° |
| O4' | C1' | N9 | H1' | 121.8° | 122.9° |
| O4' | C1' | N9 | C8 | 110.1° | 23.5° |
| O4' | C1' | N9 | C4 | 68.1° | 156.7° |
| O3' | C3' | C2' | H3' | 122.5° | 122.5° |
| O3' | C3' | C2' | O2' | 8.8° | 20.3° |
| O3' | C3' | C2' | C1' | 137.5° | 97.9° |
| O3' | C3' | C2' | H2' | 101.5° | 143.8° |
| C2' | C3' | O3' | HO3' | 66.7° | 61.5° |
| C3' | C2' | O2' | C1' | 118.4° | 112.6° |
| C3' | C2' | O2' | H2' | 122.2° | 123.6° |
| C3' | C2' | C1' | H2' | 123.5° | 118.2° |
| C3' | C2' | O2' | HO2' | 179.9° | 67.3° |
| C3' | C2' | C1' | N9 | 120.2° | 155.7° |
| C3' | C2' | C1' | H1' | 116.7° | 81.5° |
| H3' | C3' | O3' | HO3' | 57.8° | 61.0° |
| H3' | C3' | C2' | O2' | 131.2° | 102.2° |
| H3' | C3' | C2' | C1' | 100.0° | 139.6° |
| H3' | C3' | C2' | H2' | 21.0° | 21.3° |
| O2' | C2' | C1' | H2' | 110.0° | 123.6° |
| O2' | C2' | C1' | N9 | 113.3° | 86.2° |
| O2' | C2' | C1' | H1' | 9.8° | 36.7° |
| C1' | C2' | O2' | HO2' | 61.7° | 180.0° |
| C2' | C1' | N9 | H1' | 120.3° | 122.9° |
| C2' | C1' | N9 | C8 | 131.9° | 90.6° |
| C2' | C1' | N9 | C4 | 49.8° | 89.1° |
| H2' | C2' | O2' | HO2' | 57.7° | 56.3° |
| H2' | C2' | C1' | N9 | 3.4° | 37.5° |
| H2' | C2' | C1' | H1' | 119.8° | 160.3° |
| C1' | N9 | C8 | C4 | 178.6° | 179.8° |
| C1' | N9 | C8 | N7 | 178.6° | 180.0° |
| C1' | N9 | C8 | H8 | 1.3° | 0.0° |
| C1' | N9 | C4 | C5 | 179.8° | 179.8° |
| C1' | N9 | C4 | N3 | 4.1° | 0.7° |
| H1' | C1' | N9 | C8 | 11.7° | 146.5° |
| H1' | C1' | N9 | C4 | 170.1° | 33.8° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| N9 | C8 | N7 | C5 | 1.4° | 0.0° |
| C8 | N9 | C4 | C5 | 1.4° | 0.4° |
| C8 | N9 | C4 | N3 | 177.6° | 179.5° |
| C4 | N9 | C8 | N7 | 0.0° | 0.3° |
| C4 | N9 | C8 | H8 | 180.0° | 179.8° |
| N9 | C4 | C5 | N7 | 2.4° | 0.3° |
| N9 | C4 | C5 | C6 | 179.2° | 179.8° |
| N9 | C4 | C5 | N3 | 176.5° | 179.3° |
| N9 | C4 | N3 | C2 | 179.2° | 179.6° |
| C8 | N7 | C5 | C6 | 179.4° | 180.0° |
| C8 | N7 | C5 | C4 | 2.4° | 0.2° |
| H8 | C8 | N7 | C5 | 178.6° | 180.0° |
| N7 | C5 | C6 | C4 | 178.1° | 179.8° |
| N7 | C5 | C6 | N6 | 0.5° | 0.1° |
| N7 | C5 | C6 | N1 | 178.6° | 180.0° |
| N7 | C5 | C4 | N3 | 178.9° | 179.7° |
| C5 | C6 | N6 | N1 | 178.0° | 179.9° |
| C5 | C6 | N6 | HN61 | 180.0° | 0.1° |
| C5 | C6 | N6 | HN62 | 54.8° | 180.0° |
| C5 | C6 | N1 | C2 | 1.4° | 0.0° |
| C6 | C5 | C4 | N3 | 2.7° | 0.5° |
| C4 | C5 | C6 | N6 | 177.6° | 179.7° |
| C4 | C5 | C6 | N1 | 0.5° | 0.2° |
| C5 | C4 | N3 | C2 | 5.4° | 0.5° |
| C6 | N6 | HN61 | HN62 | 125.2° | 179.9° |
| N6 | C6 | N1 | C2 | 176.7° | 179.9° |
| N1 | C6 | N6 | HN61 | 2.0° | 180.0° |
| N1 | C6 | N6 | HN62 | 123.2° | 0.1° |
| C6 | N1 | C2 | N3 | 4.8° | 0.0° |
| C6 | N1 | C2 | H2 | 175.3° | 179.9° |
| N1 | C2 | N3 | H2 | 180.0° | 179.9° |
| N1 | C2 | N3 | C4 | 6.2° | 0.3° |
| H2 | C2 | N3 | C4 | 173.8° | 179.8° |
