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SummaryGeometryRelated PDB entries

SAK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAGCAEdoub1.38Å1.40ÅAromatic
CAGCARsing1.38Å1.41ÅAromatic
CAECAOsing1.39Å1.42ÅAromatic
CAOOACsing1.36Å1.35Å
CAOCAFdoub1.39Å1.41ÅAromatic
CAFCAHsing1.38Å1.41ÅAromatic
CAHCARdoub1.38Å1.42ÅAromatic
CARCAUsing1.51Å1.54Å
CAUOAMsing1.43Å1.46Å
CAUCAKsing1.54Å1.54Å
OAMCASsing1.35Å1.38Å
CAKCANsing1.52Å1.53Å
CANOABdoub1.21Å1.24Å
CANCATsing1.47Å1.40Å
CATCASdoub1.41Å1.42ÅAromatic
CATCAQsing1.40Å1.42ÅAromatic
CASCAJsing1.38Å1.41ÅAromatic
CAJCAPdoub1.39Å1.41ÅAromatic
CAPOALsing1.36Å1.37Å
CAPCAIsing1.39Å1.41ÅAromatic
OALCAAsing1.43Å1.44Å
CAICAQdoub1.38Å1.40ÅAromatic
CAQOADsing1.36Å1.36Å
CAGHAGsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
OACHOACsing0.97Å0.95Å
CAFHAFsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAUHAUsing1.09Å1.10Å
CAKHAKsing1.09Å1.10Å
CAKHAKAsing1.09Å1.10Å
CAJHAJsing1.08Å1.08Å
CAAHAAsing1.09Å1.10Å
CAAHAAAsing1.09Å1.10Å
CAAHAABsing1.09Å1.10Å
CAIHAIsing1.08Å1.08Å
OADHOADsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAECAGCAR119.4°120.1°
CAGCAECAO119.4°119.9°
CAECAGHAG120.3°120.0°
CAGCAEHAE120.3°120.1°
CAGCARCAH121.3°120.1°
CAGCARCAU118.4°120.0°
CARCAGHAG120.3°119.9°
CAECAOOAC119.4°120.1°
CAECAOCAF121.5°119.9°
CAOCAEHAE120.3°120.0°
OACCAOCAF119.1°120.0°
CAOOACHOAC109.5°114.0°
CAOCAFCAH119.0°120.0°
CAOCAFHAF120.5°120.0°
CAFCAHCAR119.4°120.0°
CAHCAFHAF120.5°120.0°
CAFCAHHAH120.3°120.0°
CAHCARCAU120.3°119.9°
CARCAHHAH120.3°120.0°
CARCAUOAM111.5°109.5°
CARCAUCAK111.9°109.5°
CARCAUHAU106.0°109.5°
OAMCAUCAK108.3°109.3°
CAUOAMCAS116.7°118.6°
OAMCAUHAU109.7°109.5°
CAUCAKCAN108.3°107.2°
CAKCAUHAU109.4°109.5°
CAUCAKHAK109.9°109.9°
CAUCAKHAKA110.1°109.9°
OAMCASCAT122.1°120.8°
OAMCASCAJ117.6°119.9°
CAKCANOAB115.3°121.7°
CAKCANCAT123.0°116.6°
CANCAKHAK109.8°109.9°
CANCAKHAKA110.1°109.9°
OABCANCAT121.7°121.7°
CANCATCAS116.3°119.1°
CANCATCAQ124.4°120.7°
CASCATCAQ119.3°120.2°
CATCASCAJ120.3°119.3°
CATCAQCAI120.0°119.6°
CATCAQOAD123.5°120.2°
CASCAJCAP120.1°120.2°
CASCAJHAJ120.0°119.8°
CAJCAPOAL115.9°119.6°
CAJCAPCAI119.6°120.7°
CAPCAJHAJ119.9°119.9°
OALCAPCAI124.5°119.7°
CAPOALCAA120.5°117.0°
CAPCAICAQ120.8°120.1°
CAPCAIHAI119.6°119.9°
OALCAAHAA109.5°109.5°
OALCAAHAAA109.5°109.5°
OALCAAHAAB109.4°109.5°
CAICAQOAD116.6°120.2°
CAQCAIHAI119.6°120.0°
CAQOADHOAD109.5°114.0°
HAKCAKHAKA108.6°109.9°
HAACAAHAAA109.5°109.4°
HAACAAHAAB109.5°109.5°
HAAACAAHAAB109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAECAGCARHAG180.0°179.8°
CAGCAECAOHAE180.0°179.9°
CAGCAECAOOAC179.9°180.0°
CAGCAECAOCAF0.4°0.0°
CAECAGCARCAH0.0°0.0°
CAECAGCARCAU179.6°180.0°
CARCAGCAECAO0.0°0.1°
CAGCARCAHCAF0.4°0.0°
CAGCARCAHCAU179.6°179.9°
CAGCARCAUOAM74.0°145.0°
CAGCARCAUCAK164.6°95.1°
CARCAGCAEHAE180.0°180.0°
CAGCARCAHHAH179.6°180.0°
CAGCARCAUHAU45.5°24.9°
CAECAOOACCAF179.7°180.0°
CAECAOCAFCAH0.7°0.0°
CAOCAECAGHAG180.0°179.7°
CAECAOOACHOAC97.7°90.1°
CAECAOCAFHAF179.3°179.9°
OACCAOCAFCAH179.6°180.0°
OACCAOCAEHAE0.0°0.1°
OACCAOCAFHAF0.4°0.1°
CAOCAFCAHHAF180.0°179.9°
CAOCAFCAHCAR0.7°0.0°
CAFCAOCAEHAE179.6°180.0°
CAFCAOOACHOAC81.9°90.0°
CAOCAFCAHHAH179.3°180.0°
CAFCAHCARHAH180.0°180.0°
CAFCAHCARCAU179.2°179.9°
CAHCARCAUOAM105.7°35.0°
CAHCARCAUCAK15.8°84.8°
CAHCARCAGHAG180.0°179.7°
CARCAHCAFHAF179.3°179.9°
CAHCARCAUHAU134.9°155.1°
CARCAUOAMCAK123.5°120.0°
CARCAUOAMHAU117.2°120.0°
CARCAUCAKHAU117.1°120.0°
CARCAUOAMCAS179.3°172.5°
CARCAUCAKCAN174.7°178.7°
CAUCARCAGHAG0.4°0.2°
CAUCARCAHHAH0.8°0.0°
CARCAUCAKHAK54.7°59.3°
CARCAUCAKHAKA64.9°61.9°
OAMCAUCAKHAU119.6°120.0°
OAMCAUCAKCAN51.4°58.7°
CAUOAMCASCAT30.6°22.3°
CAUOAMCASCAJ150.8°157.8°
OAMCAUCAKHAK68.6°60.7°
OAMCAUCAKHAKA171.8°178.2°
CAKCAUOAMCAS55.8°52.5°
CAUCAKCANHAK120.0°119.4°
CAUCAKCANHAKA120.5°119.5°
CAUCAKCANOAB152.0°139.8°
CAUCAKCANCAT28.0°40.2°
CAUCAKHAKHAKA120.5°121.1°
OAMCASCATCAN1.9°0.7°
OAMCASCATCAJ178.5°179.9°
OAMCASCATCAQ178.4°179.4°
OAMCASCAJCAP178.9°179.6°
CASOAMCAUHAU63.6°67.5°
OAMCASCAJHAJ1.1°0.4°
CAKCANOABCAT179.9°180.0°
CAKCANCATCAS2.4°12.1°
CAKCANCATCAQ177.9°167.9°
CANCAKCAUHAU68.2°61.3°
CANCAKHAKHAKA120.5°121.1°
OABCANCATCAS177.7°167.9°
OABCANCATCAQ2.1°12.1°
OABCANCAKHAK88.0°100.8°
OABCANCAKHAKA31.5°20.4°
CANCATCASCAQ179.8°180.0°
CANCATCASCAJ179.6°179.5°
CANCATCAQCAI179.1°179.5°
CANCATCAQOAD0.0°0.5°
CATCANCAKHAK92.0°79.2°
CATCANCAKHAKA148.5°159.6°
CATCASCAJCAP0.3°0.3°
CASCATCAQCAI0.7°0.4°
CASCATCAQOAD179.7°179.6°
CATCASCAJHAJ179.7°179.7°
CAQCATCASCAJ0.2°0.5°
CATCAQCAICAP0.7°0.1°
CATCAQCAIOAD179.1°180.0°
CATCAQCAIHAI179.3°179.9°
CATCAQOADHOAD44.7°90.0°
CASCAJCAPHAJ180.0°180.0°
CASCAJCAPOAL178.5°179.9°
CASCAJCAPCAI0.3°0.1°
CAJCAPOALCAI178.1°180.0°
CAJCAPOALCAA161.2°180.0°
CAJCAPCAICAQ0.2°0.2°
CAJCAPCAIHAI179.8°179.8°
OALCAPCAICAQ177.9°179.8°
OALCAPCAJHAJ1.5°0.0°
CAPOALCAAHAA45.0°60.0°
CAPOALCAAHAAA165.1°180.0°
CAPOALCAAHAAB74.9°60.0°
OALCAPCAIHAI2.1°0.2°
CAICAPOALCAA20.6°0.0°
CAPCAICAQHAI180.0°180.0°
CAPCAICAQOAD179.8°179.9°
CAICAPCAJHAJ179.7°180.0°
OALCAAHAAHAAA120.0°120.0°
OALCAAHAAHAAB120.0°120.0°
OALCAAHAAAHAAB120.0°120.0°
CAICAQOADHOAD134.4°90.0°
OADCAQCAIHAI0.2°0.1°
HAGCAGCAEHAE0.0°0.2°
HAFCAFCAHHAH0.7°0.1°
HAUCAUCAKHAK171.8°179.3°
HAUCAUCAKHAKA52.3°58.2°
HAACAAHAAAHAAB120.0°120.0°

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PDB entries from 2026-04-01

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