Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

S5A

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.46Å
C1Csing1.53Å1.56Å
C2C7doub1.38Å1.37ÅAromatic
C2C3sing1.38Å1.39ÅAromatic
C7C6sing1.38Å1.38ÅAromatic
C3C4doub1.38Å1.38ÅAromatic
C6C5doub1.39Å1.40ÅAromatic
C4C5sing1.39Å1.42ÅAromatic
C5C8sing1.48Å1.47Å
CC14sing1.51Å1.57Å
O2C14doub1.21Å1.26Å
C8C13doub1.39Å1.41ÅAromatic
C8C9sing1.39Å1.43ÅAromatic
C13C12sing1.38Å1.39ÅAromatic
C9C10doub1.38Å1.38ÅAromatic
C14O1sing1.34Å1.26Å
C12C11doub1.39Å1.39ÅAromatic
C10C11sing1.39Å1.39ÅAromatic
C11Osing1.36Å1.36Å
C4H1sing1.08Å1.08Å
C6H2sing1.08Å1.08Å
C7H3sing1.08Å1.08Å
C10H4sing1.08Å1.08Å
C13H5sing1.08Å1.08Å
CH6sing1.09Å1.10Å
CH7sing1.09Å1.10Å
OH8sing0.97Å0.95Å
C1H9sing1.09Å1.10Å
C1H10sing1.09Å1.10Å
C12H11sing1.08Å1.08Å
C3H12sing1.08Å1.08Å
C9H13sing1.08Å1.08Å
O1H14sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C104.6°109.5°
C1C2C7121.0°119.9°
C1C2C3118.4°119.9°
C2C1H9110.7°109.5°
C2C1H10110.7°109.4°
C1CC14111.8°109.5°
C1CH6108.9°109.5°
C1CH7108.9°109.5°
CC1H9110.7°109.5°
CC1H10110.7°109.5°
C7C2C3120.0°120.3°
C2C7C6120.4°120.1°
C2C7H3119.8°119.9°
C2C3C4120.3°120.1°
C2C3H12119.9°120.0°
C7C6C5121.1°119.9°
C7C6H2119.4°120.0°
C6C7H3119.8°120.0°
C3C4C5120.2°119.8°
C3C4H1119.9°120.0°
C4C3H12119.9°119.9°
C6C5C4117.8°119.8°
C6C5C8121.6°120.1°
C5C6H2119.4°120.1°
C4C5C8120.4°120.1°
C5C4H1119.9°120.1°
C5C8C13121.4°120.1°
C5C8C9121.0°120.1°
CC14O2116.8°120.0°
CC14O1117.9°120.0°
C14CH6108.9°109.5°
C14CH7108.9°109.5°
O2C14O1125.2°120.0°
C13C8C9117.6°119.9°
C8C13C12120.8°119.9°
C8C13H5119.6°120.0°
C8C9C10121.4°120.0°
C8C9H13119.3°120.0°
C13C12C11119.5°120.1°
C12C13H5119.6°120.0°
C13C12H11120.2°119.9°
C9C10C11119.1°120.1°
C9C10H4120.4°120.0°
C10C9H13119.3°120.0°
C14O1H14109.5°117.0°
C12C11C10121.6°120.1°
C12C11O123.0°119.9°
C11C12H11120.2°120.0°
C10C11O115.4°120.0°
C11C10H4120.5°120.0°
C11OH8109.5°114.0°
H6CH7109.5°109.4°
H9C1H10109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1CH9119.2°120.0°
C2C1CH10119.2°120.0°
C1C2C7C3171.0°179.8°
C1C2C7C6167.4°180.0°
C1C2C3C4168.0°179.7°
C2C1CC1466.0°180.0°
C1C2C7H312.6°0.0°
C2C1CH6173.6°60.0°
C2C1CH754.3°60.0°
C2C1H9H10122.3°120.0°
C1C2C3H1212.0°0.0°
CC1C2C786.6°90.0°
CC1C2C384.6°89.8°
C1CC14H6120.3°120.1°
C1CC14H7120.3°120.0°
C1CC14O243.5°0.0°
C1CC14O1135.7°180.0°
C1CH6H7118.9°120.0°
CC1H9H10122.3°120.0°
C2C7C6H3180.0°180.0°
C7C2C3C43.3°0.5°
C2C7C6C50.8°0.0°
C2C7C6H2179.2°180.0°
C7C2C1H932.6°30.0°
C7C2C1H10154.2°150.0°
C7C2C3H12176.8°179.7°
C3C2C7C63.6°0.3°
C2C3C4H12180.0°179.8°
C2C3C4C50.1°0.5°
C2C3C4H1179.9°179.7°
C3C2C7H3176.3°179.8°
C3C2C1H9156.2°150.3°
C3C2C1H1034.7°30.2°
C7C6C5H2180.0°180.0°
C7C6C5C42.3°0.0°
C7C6C5C8172.6°180.0°
C3C4C5C62.6°0.2°
C3C4C5H1180.0°179.8°
C3C4C5C8172.3°179.8°
C6C5C4C8175.0°180.0°
C6C5C8C13172.1°0.0°
C6C5C8C99.0°179.7°
C6C5C4H1177.4°180.0°
C5C6C7H3179.2°180.0°
C4C5C8C1313.1°180.0°
C4C5C8C9165.8°0.3°
C4C5C6H2177.7°180.0°
C5C4C3H12179.9°179.7°
C5C8C13C9178.9°179.7°
C5C8C13C12179.9°180.0°
C5C8C9C10179.8°180.0°
C8C5C4H17.7°0.0°
C8C5C6H27.4°0.0°
C5C8C13H50.1°0.0°
C5C8C9H130.3°0.0°
CC14O2O1179.1°179.9°
C14CH6H7119.0°120.0°
C14CC1H953.2°60.0°
C14CC1H10174.7°60.0°
CC14O1H14179.1°180.0°
O2C14CH676.9°120.1°
O2C14CH7163.8°120.0°
O2C14O1H140.0°0.1°
C8C13C12H5180.0°180.0°
C13C8C9C100.8°0.2°
C8C13C12C110.1°0.0°
C8C13C12H11179.9°179.9°
C13C8C9H13179.2°179.7°
C9C8C13C121.0°0.2°
C8C9C10H13180.0°180.0°
C8C9C10C110.1°0.0°
C8C9C10H4179.9°179.7°
C9C8C13H5179.1°179.8°
C13C12C11H11180.0°179.9°
C13C12C11C100.9°0.3°
C13C12C11O176.7°179.7°
C9C10C11C121.1°0.3°
C9C10C11H4180.0°179.7°
C9C10C11O176.8°179.7°
O1C14CH6103.9°60.0°
O1C14CH715.4°60.0°
C12C11C10O177.8°180.0°
C12C11C10H4179.0°180.0°
C11C12C13H5179.9°180.0°
C12C11OH8180.0°90.1°
C10C11OH82.2°89.9°
C10C11C12H11179.1°179.8°
C11C10C9H13179.8°180.0°
OC11C10H43.2°0.0°
OC11C12H113.3°0.2°
H1C4C3H120.1°0.1°
H2C6C7H30.8°0.0°
H4C10C9H130.1°0.3°
H5C13C12H110.1°0.0°
H6CC1H967.2°60.0°
H6CC1H1054.4°179.9°
H7CC1H9173.5°180.0°
H7CC1H1064.9°60.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon