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S3V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NC1doub1.32Å1.36ÅAromatic
NC2sing1.32Å1.33ÅAromatic
C1Csing1.38Å1.40ÅAromatic
C2C3doub1.38Å1.39ÅAromatic
CC4doub1.40Å1.38ÅAromatic
C3C4sing1.40Å1.40ÅAromatic
C4C5sing1.48Å1.48Å
OC5doub1.21Å1.35Å
C5O1sing1.35Å1.22Å
CH1sing1.08Å1.08Å
C1H2sing1.08Å1.08Å
C2H3sing1.08Å1.08Å
C3H4sing1.08Å1.08Å
O1H5sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1NC2117.7°122.1°
NC1C123.2°120.9°
NC1H2118.4°119.6°
NC2C3123.4°120.9°
NC2H3118.3°119.6°
C1CC4117.6°119.0°
C1CH1121.2°120.5°
CC1H2118.4°119.5°
C2C3C4118.3°119.0°
C3C2H3118.3°119.5°
C2C3H4120.9°120.5°
CC4C3119.8°118.2°
CC4C5123.1°120.9°
C4CH1121.2°120.5°
C3C4C5117.1°120.9°
C4C3H4120.9°120.5°
C4C5O115.1°120.0°
C4C5O1127.3°120.0°
OC5O1117.6°120.0°
C5O1H5109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NC1CH2180.0°180.0°
C1NC2C30.2°0.3°
NC1CC40.1°0.1°
NC1CH1179.9°180.0°
C1NC2H3179.8°180.0°
C2NC1C0.6°0.3°
NC2C3H3180.0°179.7°
NC2C3C40.8°0.1°
C2NC1H2179.4°179.7°
NC2C3H4179.2°180.0°
C1CC4H1180.0°180.0°
C1CC4C30.9°0.2°
C1CC4C5175.5°180.0°
C2C3C4C1.4°0.2°
C2C3C4H4180.0°180.0°
C2C3C4C5175.3°179.9°
CC4C3C5176.6°179.8°
CC4C5O15.1°0.0°
CC4C5O1165.2°180.0°
C4CC1H2179.9°180.0°
CC4C3H4178.6°179.8°
C3C4C5O161.4°179.7°
C3C4C5O118.3°0.3°
C3C4CH1179.1°179.8°
C4C3C2H3179.2°179.7°
C4C5OO1179.7°180.0°
C5C4CH14.5°0.0°
C5C4C3H44.7°0.0°
C4C5O1H5179.7°180.0°
OC5O1H50.0°0.0°
H1CC1H20.1°0.0°
H3C2C3H40.8°0.3°

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PDB entries from 2024-07-10

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