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S2D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C4doub1.22Å1.23Å
C4C27sing1.48Å1.55Å
C4N1sing1.35Å1.41Å
C27C32sing1.40Å1.43ÅAromatic
C27C28doub1.40Å1.42ÅAromatic
C32C31doub1.38Å1.41ÅAromatic
C32H32sing1.08Å1.08Å
C31C30sing1.38Å1.41ÅAromatic
C31H31sing1.08Å1.08Å
C30C29doub1.38Å1.41ÅAromatic
C30H30sing1.08Å1.08Å
C29C28sing1.38Å1.41ÅAromatic
C29H29sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
N1C2sing1.47Å1.52Å
N1H1sing0.97Å1.00Å
C2C3sing1.53Å1.58Å
C2C1sing1.51Å1.51Å
C2H2sing1.09Å1.10Å
C3H3C1sing1.09Å1.10Å
C3H3C2sing1.09Å1.10Å
C3H3C3sing1.09Å1.10Å
C1O1doub1.21Å1.28Å
C1OXTsing1.34Å1.47Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C4C27114.0°120.0°
O2C4N1125.2°120.0°
C27C4N1120.6°120.0°
C4C27C32120.6°120.2°
C4C27C28121.8°120.1°
C4N1C2141.6°120.0°
C4N1H1109.2°120.0°
C32C27C28117.6°119.7°
C27C32C31122.3°119.9°
C27C32H32118.9°120.1°
C27C28C29120.2°119.9°
C27C28H28119.9°120.0°
C31C32H32118.8°120.0°
C32C31C30118.9°120.1°
C32C31H31120.6°119.9°
C30C31H31120.5°120.0°
C31C30C29119.7°120.3°
C31C30H30120.1°119.8°
C29C30H30120.1°119.9°
C30C29C28121.3°120.2°
C30C29H29119.4°119.9°
C28C29H29119.4°119.9°
C29C28H28119.9°120.1°
C2N1H1109.2°120.0°
N1C2C3120.0°109.4°
N1C2C1117.9°109.4°
N1C2H293.3°109.4°
C3C2C1111.9°109.5°
C3C2H2102.9°109.5°
C2C3H3C1109.5°109.5°
C2C3H3C2109.5°109.4°
C2C3H3C3109.5°109.5°
C1C2H2106.4°109.5°
C2C1O1127.1°120.0°
C2C1OXT105.3°120.0°
H3C1C3H3C2109.4°109.5°
H3C1C3H3C3109.5°109.5°
H3C2C3H3C3109.5°109.5°
O1C1OXT127.5°120.0°
C1OXTHXT109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C4C27N1175.7°179.7°
O2C4C27C3223.1°0.0°
O2C4C27C28154.7°179.7°
O2C4N1C253.0°0.0°
O2C4N1H1127.0°180.0°
C4C27C32C28177.9°179.7°
C4C27C32C31179.9°180.0°
C4C27C32H320.2°0.0°
C4C27C28C29179.2°179.7°
C4C27C28H280.8°0.0°
C27C4N1C2131.8°179.7°
C27C4N1H148.2°0.3°
N1C4C27C32161.1°179.7°
N1C4C27C2821.1°0.0°
C4N1C2H1180.0°180.0°
C4N1C2C3116.4°85.0°
C4N1C2C126.2°155.0°
C4N1C2H2136.7°35.0°
C27C32C31H32180.0°179.9°
C27C32C31C301.1°0.0°
C27C32C31H31178.9°180.0°
C32C27C28C291.4°0.6°
C32C27C28H28178.6°179.7°
C28C27C32C312.0°0.3°
C28C27C32H32178.0°179.8°
C27C28C29C300.1°0.6°
C27C28C29H28180.0°179.7°
C27C28C29H29180.0°179.6°
C32C31C30H31180.0°180.0°
C32C31C30C290.4°0.0°
C32C31C30H30179.6°180.0°
H32C32C31C30178.9°179.9°
H32C32C31H311.1°0.1°
C31C30C29H30180.0°180.0°
C31C30C29C281.0°0.3°
C31C30C29H29179.0°179.9°
H31C31C30C29179.6°180.0°
H31C31C30H300.4°0.0°
C30C29C28H29180.0°179.8°
C30C29C28H28179.9°179.7°
H30C30C29C28179.0°179.7°
H30C30C29H290.9°0.1°
H29C29C28H280.1°0.1°
N1C2C3C1144.6°120.0°
N1C2C3H2101.6°120.0°
N1C2C1H2102.9°120.0°
N1C2C3H3C1180.0°60.0°
N1C2C3H3C260.0°180.0°
N1C2C3H3C360.0°60.0°
N1C2C1O182.2°0.0°
N1C2C1OXT96.0°180.0°
H1N1C2C363.6°95.0°
H1N1C2C1153.8°25.0°
H1N1C2H243.3°145.0°
C3C2C1H2111.7°120.1°
C2C3H3C1H3C2120.0°119.9°
C2C3H3C1H3C3120.0°120.0°
C2C3H3C2H3C3120.0°120.0°
C3C2C1O163.2°119.9°
C3C2C1OXT118.6°60.0°
C1C2C3H3C135.4°180.0°
C1C2C3H3C284.6°60.0°
C1C2C3H3C3155.4°60.0°
C2C1O1OXT177.8°179.9°
C2C1OXTHXT178.1°180.0°
H2C2C3H3C178.5°60.0°
H2C2C3H3C2161.6°60.0°
H2C2C3H3C341.6°180.0°
H2C2C1O1174.9°120.0°
H2C2C1OXT6.9°60.1°
H3C1C3H3C2H3C3120.0°120.0°
O1C1OXTHXT0.0°0.1°

238895

PDB entries from 2025-07-16

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