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S1P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1sing1.53Å1.52Å
O1C1sing1.43Å1.43Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
O1P22sing1.61Å1.62Å
C3C2sing1.53Å1.54Å
N2C2sing1.47Å1.47Å
C2H2sing1.09Å1.10Å
N2HN2sing1.01Å1.00Å
N2HN2Asing1.01Å1.00Å
C4C3sing1.51Å1.52Å
C3O3sing1.43Å1.43Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C5C4doub1.31Å1.33Å
C4H4sing1.08Å1.08Å
C6C5sing1.51Å1.51Å
C5H5sing1.08Å1.08Å
C7C6sing1.53Å1.53Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C8C7sing1.53Å1.51Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8C9sing1.53Å1.51Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C10C9sing1.53Å1.52Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C11C10sing1.53Å1.53Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C12C11sing1.53Å1.53Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C12C13sing1.53Å1.52Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C14C13sing1.53Å1.54Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C14C15sing1.53Å1.53Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C15C16sing1.53Å1.53Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C16C17sing1.53Å1.52Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
C17C18sing1.53Å1.52Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C18H18sing1.09Å1.10Å
C18H18Asing1.09Å1.10Å
C18H18Bsing1.09Å1.10Å
O25P22doub1.48Å1.53Å
O24P22sing1.61Å1.49Å
P22O23sing1.61Å1.47Å
O23HO23sing0.97Å0.95Å
O24HO24sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1108.2°109.5°
C2C1H1109.9°109.5°
C2C1H1A109.9°109.5°
C1C2C3110.2°109.4°
C1C2N2110.2°109.5°
C1C2H2108.5°109.5°
O1C1H1109.9°109.5°
O1C1H1A109.9°109.5°
C1O1P22120.9°123.0°
H1C1H1A109.0°109.5°
O1P22O25104.8°109.5°
O1P22O24102.8°109.5°
O1P22O23107.0°109.5°
C3C2N2109.7°109.4°
C3C2H2109.0°109.4°
C2C3C4111.0°109.5°
C2C3O3108.4°109.5°
C2C3H3108.7°109.5°
N2C2H2109.0°109.5°
C2N2HN2109.5°111.1°
C2N2HN2A109.5°111.0°
HN2N2HN2A109.5°111.0°
C4C3O3107.9°109.4°
C4C3H3109.1°109.5°
C3C4C5119.1°120.0°
C3C4H4120.5°120.0°
O3C3H3111.7°109.5°
C3O3HO3109.5°114.0°
C5C4H4120.5°120.0°
C4C5C6120.1°120.0°
C4C5H5119.9°120.0°
C6C5H5120.0°120.0°
C5C6C7107.3°109.5°
C5C6H6110.2°109.5°
C5C6H6A110.2°109.5°
C7C6H6110.2°109.4°
C7C6H6A110.2°109.5°
C6C7C8108.4°109.5°
C6C7H7109.8°109.4°
C6C7H7A109.9°109.5°
H6C6H6A108.7°109.4°
C8C7H7109.9°109.5°
C8C7H7A109.8°109.5°
C7C8C9117.0°109.5°
C7C8H8107.0°109.5°
C7C8H8A107.0°109.4°
H7C7H7A109.1°109.4°
C9C8H8107.1°109.5°
C9C8H8A107.1°109.4°
C8C9C10104.4°109.5°
C8C9H9111.2°109.5°
C8C9H9A111.2°109.4°
H8C8H8A111.8°109.5°
C10C9H9111.2°109.5°
C10C9H9A111.2°109.4°
C9C10C11115.7°109.4°
C9C10H10107.4°109.5°
C9C10H10A107.5°109.4°
H9C9H9A107.7°109.5°
C11C10H10107.5°109.5°
C11C10H10A107.5°109.5°
C10C11C12108.6°109.4°
C10C11H11109.8°109.5°
C10C11H11A109.8°109.5°
H10C10H10A111.4°109.5°
C12C11H11109.8°109.5°
C12C11H11A109.8°109.5°
C11C12C13108.5°109.5°
C11C12H12109.8°109.5°
C11C12H12A109.8°109.5°
H11C11H11A109.2°109.5°
C13C12H12109.8°109.4°
C13C12H12A109.8°109.5°
C12C13C14116.0°109.5°
C12C13H13107.3°109.4°
C12C13H13A107.4°109.5°
H12C12H12A109.2°109.4°
C14C13H13107.4°109.5°
C14C13H13A107.3°109.5°
C13C14C15113.2°109.5°
C13C14H14108.3°109.4°
C13C14H14A108.3°109.4°
H13C13H13A111.5°109.4°
C15C14H14108.3°109.5°
C15C14H14A108.2°109.4°
C14C15C16115.1°109.4°
C14C15H15107.6°109.5°
C14C15H15A107.7°109.4°
H14C14H14A110.6°109.5°
C16C15H15107.7°109.5°
C16C15H15A107.7°109.4°
C15C16C17110.4°109.5°
C15C16H16109.2°109.5°
C15C16H16A109.2°109.5°
H15C15H15A111.2°109.5°
C17C16H16109.2°109.4°
C17C16H16A109.2°109.4°
C16C17C18112.5°109.5°
C16C17H17108.5°109.5°
C16C17H17A108.5°109.5°
H16C16H16A109.7°109.5°
C18C17H17108.5°109.5°
C18C17H17A108.5°109.5°
C17C18H18109.5°109.5°
C17C18H18A109.4°109.5°
C17C18H18B109.5°109.4°
H17C17H17A110.5°109.4°
H18C18H18A109.5°109.4°
H18C18H18B109.5°109.5°
H18AC18H18B109.5°109.5°
O25P22O24107.6°109.5°
O25P22O23114.2°109.4°
O24P22O23118.9°109.5°
P22O24HO24109.5°114.0°
P22O23HO23109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1H1120.0°120.0°
C2C1O1H1A120.0°120.0°
C2C1H1H1A120.5°120.0°
C2C1O1P22125.1°180.0°
C1C2C3N2121.6°120.0°
C1C2C3H2119.0°120.0°
C1C2N2H2119.0°120.1°
C1C2N2HN2180.0°176.0°
C1C2N2HN2A60.0°59.9°
C1C2C3C4172.4°180.0°
C1C2C3O369.2°60.0°
C1C2C3H352.4°60.0°
O1C1H1H1A120.6°120.0°
O1C1C2C360.6°175.0°
O1C1C2N260.7°65.0°
O1C1C2H2179.9°55.0°
C1O1P22O2577.0°55.0°
C1O1P22O24170.6°175.0°
C1O1P22O2344.6°65.0°
H1C1O1P22114.9°60.0°
H1C1C2C359.4°55.0°
H1C1C2N2179.3°175.0°
H1C1C2H259.9°64.9°
H1AC1O1P225.1°60.0°
H1AC1C2C3179.4°65.0°
H1AC1C2N259.3°55.0°
H1AC1C2H260.0°175.0°
O1P22O25O24108.9°120.0°
O1P22O25O23116.8°120.0°
O1P22O24O23117.9°120.0°
O1P22O23HO23115.5°60.0°
O1P22O24HO24110.3°179.9°
C3C2N2H2119.4°120.0°
C3C2N2HN258.4°64.0°
C3C2N2HN2A61.6°60.1°
C2C3C4O3118.6°120.0°
C2C3C4H3119.8°120.0°
C2C3O3H3119.7°120.0°
C2C3O3HO3180.0°60.0°
C2C3C4C5121.4°125.0°
C2C3C4H458.6°55.0°
C2N2HN2HN2A120.0°124.0°
N2C2C3C450.8°60.0°
N2C2C3O3169.2°180.0°
N2C2C3H369.2°60.0°
H2C2N2HN261.0°56.0°
H2C2N2HN2A179.0°180.0°
H2C2C3C468.6°60.0°
H2C2C3O349.8°60.0°
H2C2C3H3171.4°180.0°
C4C3O3H3120.0°120.0°
C4C3O3HO359.7°60.0°
C3C4C5H4180.0°180.0°
C3C4C5C6179.9°180.0°
C3C4C5H50.1°0.0°
O3C3C4C5120.0°5.0°
O3C3C4H460.0°175.0°
H3C3O3HO360.3°180.0°
H3C3C4C51.6°115.0°
H3C3C4H4178.4°65.0°
C4C5C6H5180.0°180.0°
C4C5C6C7128.0°125.0°
C4C5C6H6112.1°115.0°
C4C5C6H6A7.9°5.0°
H4C4C5C60.1°0.0°
H4C4C5H5179.8°180.0°
C5C6C7H6120.0°120.0°
C5C6C7H6A120.0°120.1°
C5C6H6H6A120.9°120.0°
C5C6C7C8119.2°180.0°
C5C6C7H70.9°60.0°
C5C6C7H7A120.9°59.9°
H5C5C6C752.0°54.9°
H5C5C6H668.0°65.0°
H5C5C6H6A172.0°175.0°
C7C6H6H6A120.9°120.0°
C6C7C8H7120.0°120.0°
C6C7C8H7A120.0°120.1°
C6C7H7H7A120.5°120.0°
C6C7C8C996.8°179.9°
C6C7C8H8143.2°60.0°
C6C7C8H8A23.2°60.0°
H6C6C7C8120.9°60.0°
H6C6C7H7119.1°NaN°
H6C6C7H7A0.9°60.0°
H6AC6C7C80.8°59.9°
H6AC6C7H7120.9°60.1°
H6AC6C7H7A119.1°180.0°
C8C7H7H7A120.4°120.0°
C7C8C9H8120.0°120.0°
C7C8C9H8A120.0°119.9°
C7C8H8H8A116.9°120.0°
C7C8C9C10144.7°180.0°
C7C8C9H995.3°60.0°
C7C8C9H9A24.7°60.1°
H7C7C8C923.2°60.0°
H7C7C8H896.8°180.0°
H7C7C8H8A143.2°60.0°
H7AC7C8C9143.2°60.0°
H7AC7C8H823.2°60.0°
H7AC7C8H8A96.8°179.9°
C9C8H8H8A116.9°120.0°
C8C9C10H9120.0°120.1°
C8C9C10H9A120.0°119.9°
C8C9H9H9A122.1°120.0°
C8C9C10C11109.3°180.0°
C8C9C10H10130.6°59.9°
C8C9C10H10A10.7°60.1°
H8C8C9C1024.7°59.9°
H8C8C9H9144.7°180.0°
H8C8C9H9A95.2°60.0°
H8AC8C9C1095.3°60.1°
H8AC8C9H924.7°60.0°
H8AC8C9H9A144.8°180.0°
C10C9H9H9A122.1°120.0°
C9C10C11H10120.0°120.0°
C9C10C11H10A120.0°119.9°
C9C10H10H10A117.4°120.0°
C9C10C11C12170.2°179.9°
C9C10C11H1150.2°60.0°
C9C10C11H11A69.8°60.1°
H9C9C10C1110.6°60.0°
H9C9C10H10109.4°180.0°
H9C9C10H10A130.6°60.0°
H9AC9C10C11130.7°60.0°
H9AC9C10H1010.6°60.0°
H9AC9C10H10A109.3°180.0°
C11C10H10H10A117.5°120.0°
C10C11C12H11120.0°120.0°
C10C11C12H11A120.0°120.0°
C10C11H11H11A120.4°120.0°
C10C11C12C13125.5°180.0°
C10C11C12H125.5°60.0°
C10C11C12H12A114.5°60.0°
H10C10C11C1269.8°60.1°
H10C10C11H11170.2°180.0°
H10C10C11H11A50.2°59.9°
H10AC10C11C1250.2°60.0°
H10AC10C11H1169.8°60.0°
H10AC10C11H11A170.2°NaN°
C12C11H11H11A120.4°120.0°
C11C12C13H12120.0°120.0°
C11C12C13H12A120.0°120.1°
C11C12H12H12A120.4°120.0°
C11C12C13C14160.6°180.0°
C11C12C13H1379.4°60.0°
C11C12C13H13A40.6°59.9°
H11C11C12C13114.5°60.0°
H11C11C12H12125.5°180.0°
H11C11C12H12A5.5°60.0°
H11AC11C12C135.5°60.0°
H11AC11C12H12114.5°60.0°
H11AC11C12H12A125.5°179.9°
C13C12H12H12A120.4°120.0°
C12C13C14H13120.0°120.0°
C12C13C14H13A120.0°120.0°
C12C13H13H13A117.3°120.0°
C12C13C14C1598.2°179.9°
C12C13C14H1421.8°60.0°
C12C13C14H14A141.8°60.0°
H12C12C13C1440.6°60.0°
H12C12C13H13160.6°180.0°
H12C12C13H13A79.4°60.1°
H12AC12C13C1479.4°60.0°
H12AC12C13H1340.6°60.0°
H12AC12C13H13A160.6°180.0°
C14C13H13H13A117.3°120.0°
C13C14C15H14120.0°120.0°
C13C14C15H14A120.0°119.9°
C13C14H14H14A118.5°120.0°
C13C14C15C1658.1°180.0°
C13C14C15H1561.9°60.0°
C13C14C15H15A178.2°60.1°
H13C13C14C15141.8°60.0°
H13C13C14H1498.1°180.0°
H13C13C14H14A21.8°60.0°
H13AC13C14C1521.8°60.0°
H13AC13C14H14141.9°60.0°
H13AC13C14H14A98.2°180.0°
C15C14H14H14A118.5°120.0°
C14C15C16H15120.0°120.0°
C14C15C16H15A120.0°119.9°
C14C15H15H15A117.7°120.0°
C14C15C16C17177.0°180.0°
C14C15C16H1663.0°60.0°
C14C15C16H16A57.0°60.1°
H14C14C15C16178.2°60.0°
H14C14C15H1558.2°180.0°
H14C14C15H15A61.8°60.0°
H14AC14C15C1661.9°60.1°
H14AC14C15H15178.1°60.0°
H14AC14C15H15A58.1°180.0°
C16C15H15H15A117.7°120.0°
C15C16C17H16120.0°120.0°
C15C16C17H16A120.0°120.0°
C15C16H16H16A119.6°120.1°
C15C16C17C18166.9°179.9°
C15C16C17H1773.2°60.0°
C15C16C17H17A46.9°60.0°
H15C15C16C1757.0°60.0°
H15C15C16H16177.0°180.0°
H15C15C16H16A63.0°60.0°
H15AC15C16C1763.0°60.0°
H15AC15C16H1657.0°59.9°
H15AC15C16H16A177.0°180.0°
C17C16H16H16A119.6°119.9°
C16C17C18H17120.0°120.0°
C16C17C18H17A120.0°120.0°
C16C17H17H17A118.8°120.0°
C16C17C18H18180.0°60.0°
C16C17C18H18A60.0°60.0°
C16C17C18H18B60.0°180.0°
H16C16C17C1846.8°60.0°
H16C16C17H17166.8°180.0°
H16C16C17H17A73.1°60.0°
H16AC16C17C1873.1°60.0°
H16AC16C17H1746.9°60.0°
H16AC16C17H17A166.9°180.0°
C18C17H17H17A118.7°120.0°
C17C18H18H18A120.0°120.0°
C17C18H18H18B120.0°120.0°
C17C18H18AH18B120.0°120.0°
H17C17C18H1860.0°180.0°
H17C17C18H18A180.0°60.0°
H17C17C18H18B60.0°60.0°
H17AC17C18H1860.0°60.0°
H17AC17C18H18A60.0°180.0°
H17AC17C18H18B180.0°60.0°
H18C18H18AH18B120.0°120.0°
O25P22O24O23131.8°120.0°
O25P22O23HO230.0°180.0°
O25P22O24HO240.0°60.1°
O24P22O23HO23128.8°60.0°
O23P22O24HO24131.8°59.9°

227111

PDB entries from 2024-11-06

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