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S02

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PO1Pdoub1.48Å1.47Å
PO2Psing1.61Å1.47Å
PO3Psing1.61Å1.57Å
PO5'sing1.61Å1.59Å
O2PHOP2sing0.97Å0.95Å
O3PHOP3sing0.97Å0.95Å
O5'C5'sing1.43Å1.44Å
C5'CA'sing1.53Å1.46Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.11Å
CA'OB'sing1.43Å1.45Å
CA'HA1sing1.09Å1.12Å
CA'HA2sing1.09Å1.11Å
OB'C1Asing1.43Å1.48Å
C1AC6Asing1.53Å1.37Å
C1AC2Asing1.53Å1.42Å
C1AH1Asing1.09Å1.12Å
C6AC5Asing1.53Å1.34Å
C6AH6A1sing1.09Å1.11Å
C6AH6A2sing1.09Å1.12Å
C2AC3Asing1.53Å1.35Å
C2AH2A1sing1.09Å1.12Å
C2AH2A2sing1.09Å1.11Å
C3AC4Asing1.51Å1.34Å
C3AH3A1sing1.09Å1.11Å
C3AH3A2sing1.09Å1.11Å
C4AC7Adoub1.33Å1.36Å
C4AC5Asing1.51Å1.44Å
C7AC7Bsing1.47Å1.23Å
C7AH7Asing1.08Å1.10Å
C5AH5A1sing1.09Å1.12Å
C5AH5A2sing1.09Å1.12Å
C1BC6Bsing1.53Å1.37Å
C1BC2Bsing1.53Å1.41Å
C1BOC'sing1.43Å1.47Å
C1BH1Bsing1.09Å1.11Å
C6BC5Bsing1.53Å1.34Å
C6BH6B1sing1.09Å1.11Å
C6BH6B2sing1.09Å1.12Å
C2BC3Bsing1.53Å1.35Å
C2BH2B1sing1.09Å1.12Å
C2BH2B2sing1.09Å1.11Å
C3BC4Bsing1.51Å1.34Å
C3BH3B1sing1.09Å1.12Å
C3BH3B2sing1.09Å1.11Å
C4BC7Bdoub1.33Å1.37Å
C4BC5Bsing1.51Å1.45Å
C7BH7Bsing1.08Å1.10Å
C5BH5B1sing1.09Å1.11Å
C5BH5B2sing1.09Å1.11Å
OC'CD'sing1.43Å1.43Å
CD'C3'sing1.53Å1.33Å
CD'HD'1sing1.09Å1.11Å
CD'HD'2sing1.09Å1.11Å
C3'O3'sing1.43Å1.42Å
C3'H3'1sing1.09Å1.12Å
C3'H3'2sing1.09Å1.11Å
O3'HO3'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1PPO2P119.4°109.5°
O1PPO3P106.8°109.5°
O1PPO5'109.6°109.5°
O2PPO3P105.6°109.4°
O2PPO5'111.5°109.5°
PO2PHOP2119.3°106.8°
O3PPO5'102.3°109.4°
PO3PHOP3106.9°106.8°
PO5'C5'120.9°106.8°
O5'C5'CA'114.8°109.5°
O5'C5'H5'1110.3°109.5°
O5'C5'H5'2110.3°109.5°
CA'C5'H5'1110.2°109.4°
CA'C5'H5'2110.2°109.4°
C5'CA'OB'114.7°109.4°
C5'CA'HA1110.3°109.5°
C5'CA'HA2110.3°109.5°
H5'1C5'H5'2100.0°109.4°
OB'CA'HA1110.3°109.5°
OB'CA'HA2110.3°109.5°
CA'OB'C1A118.2°106.8°
HA1CA'HA299.9°109.5°
OB'C1AC6A128.6°109.4°
OB'C1AC2A110.9°109.4°
OB'C1AH1A97.4°109.4°
C6AC1AC2A120.5°109.8°
C6AC1AH1A31.5°109.4°
C1AC6AC5A121.0°109.4°
C1AC6AH6A1108.1°109.6°
C1AC6AH6A2108.1°109.5°
C2AC1AH1A151.5°109.4°
C1AC2AC3A119.1°109.5°
C1AC2AH2A1108.7°109.5°
C1AC2AH2A2108.8°109.4°
C5AC6AH6A1108.0°109.4°
C5AC6AH6A2108.0°109.5°
C6AC5AC4A117.3°108.5°
C6AC5AH5A1109.4°109.6°
C6AC5AH5A2109.4°109.6°
H6A1C6AH6A2101.8°109.5°
C3AC2AH2A1108.7°109.4°
C3AC2AH2A2108.7°109.5°
C2AC3AC4A120.1°108.7°
C2AC3AH3A1108.4°109.7°
C2AC3AH3A2108.4°109.6°
H2A1C2AH2A2101.3°109.5°
C4AC3AH3A1108.4°109.3°
C4AC3AH3A2108.4°109.7°
C3AC4AC7A116.7°120.9°
C3AC4AC5A121.9°118.4°
H3A1C3AH3A2101.6°109.8°
C7AC4AC5A121.4°120.8°
C4AC7AC7B122.9°120.0°
C4AC7AH7A124.0°120.0°
C4AC5AH5A1109.4°109.7°
C4AC5AH5A2109.3°109.6°
C7BC7AH7A113.2°120.0°
C7AC7BC4B121.4°120.0°
C7AC7BH7B113.7°120.0°
H5A1C5AH5A2100.7°109.8°
C6BC1BC2B120.6°109.8°
C6BC1BOC'124.2°109.4°
C6BC1BH1B26.9°109.4°
C1BC6BC5B121.0°109.4°
C1BC6BH6B1108.1°109.5°
C1BC6BH6B2108.1°109.4°
C2BC1BOC'115.2°109.4°
C2BC1BH1B145.5°109.5°
C1BC2BC3B119.5°109.4°
C1BC2BH2B1108.6°109.5°
C1BC2BH2B2108.6°109.5°
OC'C1BH1B98.5°109.3°
C1BOC'CD'119.4°106.8°
C5BC6BH6B1108.1°109.5°
C5BC6BH6B2108.1°109.5°
C6BC5BC4B117.3°108.5°
C6BC5BH5B1109.3°109.6°
C6BC5BH5B2109.4°109.6°
H6B1C6BH6B2101.8°109.5°
C3BC2BH2B1108.6°109.4°
C3BC2BH2B2108.7°109.4°
C2BC3BC4B119.8°108.5°
C2BC3BH3B1108.5°109.7°
C2BC3BH3B2108.5°109.7°
H2B1C2BH2B2101.3°109.5°
C4BC3BH3B1108.5°109.6°
C4BC3BH3B2108.5°109.6°
C3BC4BC7B117.1°120.9°
C3BC4BC5B121.9°118.2°
H3B1C3BH3B2101.5°109.8°
C7BC4BC5B121.0°120.9°
C4BC7BH7B124.8°120.0°
C4BC5BH5B1109.4°109.6°
C4BC5BH5B2109.4°109.6°
H5B1C5BH5B2100.8°109.8°
OC'CD'C3'107.0°109.5°
OC'CD'HD'1113.1°109.5°
OC'CD'HD'2113.2°109.5°
C3'CD'HD'1113.1°109.5°
C3'CD'HD'2113.1°109.5°
CD'C3'O3'107.8°109.5°
CD'C3'H3'1112.8°109.5°
CD'C3'H3'2112.8°109.5°
HD'1CD'HD'297.3°109.4°
O3'C3'H3'1112.8°109.5°
O3'C3'H3'2112.9°109.4°
C3'O3'HO3'107.7°106.8°
H3'1C3'H3'297.6°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1PPO2PO3P120.2°120.0°
O1PPO2PO5'129.5°120.0°
O1PPO3PO5'115.1°120.0°
O1PPO2PHOP2180.0°180.0°
O1PPO3PHOP3180.0°60.0°
O1PPO5'C5'37.2°60.0°
O2PPO3PO5'116.8°120.0°
O2PPO3PHOP351.9°60.0°
O2PPO5'C5'171.6°60.1°
O3PPO2PHOP259.8°60.0°
O3PPO5'C5'75.9°180.0°
O5'PO2PHOP250.5°60.0°
O5'PO3PHOP364.8°180.0°
PO5'C5'CA'55.0°180.0°
PO5'C5'H5'1179.8°60.0°
PO5'C5'H5'270.3°60.0°
O5'C5'CA'H5'1125.2°120.0°
O5'C5'CA'H5'2125.3°120.1°
O5'C5'H5'1H5'2116.1°120.0°
O5'C5'CA'OB'60.4°60.0°
O5'C5'CA'HA1174.4°60.0°
O5'C5'CA'HA264.9°180.0°
CA'C5'H5'1H5'2116.1°119.9°
C5'CA'OB'HA1125.3°120.0°
C5'CA'OB'HA2125.3°120.0°
C5'CA'HA1HA2116.2°120.0°
C5'CA'OB'C1A164.8°180.0°
H5'1C5'CA'OB'64.8°180.0°
H5'1C5'CA'HA160.4°60.0°
H5'1C5'CA'HA2169.9°60.0°
H5'2C5'CA'OB'174.3°60.0°
H5'2C5'CA'HA149.1°180.0°
H5'2C5'CA'HA260.4°60.0°
OB'CA'HA1HA2116.1°120.1°
CA'OB'C1AC6A173.3°150.0°
CA'OB'C1AC2A5.9°89.7°
CA'OB'C1AH1A178.0°30.1°
HA1CA'OB'C1A39.5°60.0°
HA2CA'OB'C1A69.9°60.1°
OB'C1AC6AC2A179.2°120.1°
OB'C1AC6AH1A9.0°119.8°
OB'C1AC2AH1A171.8°119.8°
OB'C1AC6AC5A179.6°176.3°
OB'C1AC6AH6A154.4°63.7°
OB'C1AC6AH6A255.1°56.3°
OB'C1AC2AC3A179.6°176.4°
OB'C1AC2AH2A155.2°63.7°
OB'C1AC2AH2A254.3°56.3°
C6AC1AC2AH1A8.9°120.1°
C1AC6AC5AH6A1125.3°120.0°
C1AC6AC5AH6A2125.3°120.0°
C1AC6AH6A1H6A2113.8°120.1°
C6AC1AC2AC3A1.1°63.5°
C6AC1AC2AH2A1124.1°56.4°
C6AC1AC2AH2A2126.4°176.4°
C1AC6AC5AC4A0.4°54.6°
C1AC6AC5AH5A1124.9°174.3°
C1AC6AC5AH5A2125.7°65.1°
C2AC1AC6AC5A1.2°63.6°
C2AC1AC6AH6A1126.5°56.4°
C2AC1AC6AH6A2124.0°176.4°
C1AC2AC3AH2A1125.2°120.0°
C1AC2AC3AH2A2125.3°120.0°
C1AC2AH2A1H2A2114.5°120.0°
C1AC2AC3AC4A0.3°54.5°
C1AC2AC3AH3A1125.5°65.0°
C1AC2AC3AH3A2125.0°174.4°
H1AC1AC6AC5A170.6°56.5°
H1AC1AC6AH6A145.4°176.4°
H1AC1AC6AH6A264.2°63.5°
H1AC1AC2AC3A7.8°56.6°
H1AC1AC2AH2A1133.0°176.5°
H1AC1AC2AH2A2117.5°63.5°
C5AC6AH6A1H6A2113.6°120.0°
C6AC5AC4AC3A0.5°51.1°
C6AC5AC4AC7A178.2°128.7°
C6AC5AC4AH5A1125.3°119.7°
C6AC5AC4AH5A2125.3°119.7°
C6AC5AH5A1H5A2115.2°120.5°
H6A1C6AC5AC4A125.7°65.4°
H6A1C6AC5AH5A10.4°54.3°
H6A1C6AC5AH5A2109.0°174.9°
H6A2C6AC5AC4A124.8°174.6°
H6A2C6AC5AH5A1109.9°65.7°
H6A2C6AC5AH5A20.4°54.9°
C3AC2AH2A1H2A2114.4°120.0°
C2AC3AC4AH3A1125.3°119.7°
C2AC3AC4AH3A2125.3°119.9°
C2AC3AH3A1H3A2114.1°120.5°
C2AC3AC4AC7A178.2°128.7°
C2AC3AC4AC5A0.5°51.1°
H2A1C2AC3AC4A125.0°65.5°
H2A1C2AC3AH3A10.3°175.0°
H2A1C2AC3AH3A2109.7°54.4°
H2A2C2AC3AC4A125.5°174.5°
H2A2C2AC3AH3A1109.2°55.0°
H2A2C2AC3AH3A20.3°65.6°
C4AC3AH3A1H3A2114.0°120.4°
C3AC4AC7AC5A178.7°179.8°
C3AC4AC7AC7B168.2°5.9°
C3AC4AC7AH7A11.8°174.1°
C3AC4AC5AH5A1125.8°170.8°
C3AC4AC5AH5A2124.8°68.5°
H3A1C3AC4AC7A56.5°111.6°
H3A1C3AC4AC5A124.8°68.6°
H3A2C3AC4AC7A52.9°8.9°
H3A2C3AC4AC5A125.8°171.0°
C4AC7AC7BH7A180.0°180.0°
C7AC4AC5AH5A152.9°9.0°
C7AC4AC5AH5A256.5°111.6°
C4AC7AC7BC4B175.5°174.5°
C4AC7AC7BH7B4.5°5.5°
C5AC4AC7AC7B13.1°174.3°
C5AC4AC7AH7A166.9°5.7°
C4AC5AH5A1H5A2115.1°120.5°
C7AC7BC4BC3B178.9°175.0°
C7AC7BC4BH7B180.0°179.9°
C7AC7BC4BC5B2.2°5.0°
H7AC7AC7BC4B4.5°5.5°
H7AC7AC7BH7B175.6°174.5°
C6BC1BC2BOC'179.3°120.1°
C6BC1BC2BH1B14.3°120.1°
C6BC1BOC'H1B8.5°119.8°
C1BC6BC5BH6B1125.2°120.0°
C1BC6BC5BH6B2125.3°119.9°
C1BC6BH6B1H6B2113.7°120.0°
C6BC1BC2BC3B0.6°63.6°
C6BC1BC2BH2B1125.9°176.4°
C6BC1BC2BH2B2124.7°56.3°
C1BC6BC5BC4B0.4°54.7°
C1BC6BC5BH5B1125.7°65.0°
C1BC6BC5BH5B2124.8°174.4°
C6BC1BOC'CD'16.8°89.7°
C2BC1BOC'H1B172.3°119.9°
C2BC1BC6BC5B0.5°63.7°
C2BC1BC6BH6B1124.8°56.3°
C2BC1BC6BH6B2125.8°176.4°
C1BC2BC3BH2B1125.3°120.0°
C1BC2BC3BH2B2125.3°120.0°
C1BC2BH2B1H2B2114.3°120.1°
C1BC2BC3BC4B0.7°54.6°
C1BC2BC3BH3B1124.6°65.0°
C1BC2BC3BH3B2126.0°174.3°
C2BC1BOC'CD'162.4°150.0°
OC'C1BC6BC5B178.7°176.3°
OC'C1BC6BH6B156.0°63.7°
OC'C1BC6BH6B253.5°56.4°
OC'C1BC2BC3B178.7°176.3°
OC'C1BC2BH2B153.4°56.3°
OC'C1BC2BH2B256.0°63.8°
C1BOC'CD'C3'175.4°180.0°
C1BOC'CD'HD'159.4°59.9°
C1BOC'CD'HD'250.1°60.0°
H1BC1BC6BC5B162.5°56.5°
H1BC1BC6BH6B137.2°176.5°
H1BC1BC6BH6B272.2°63.4°
H1BC1BC2BC3B14.9°56.5°
H1BC1BC2BH2B1140.2°63.4°
H1BC1BC2BH2B2110.4°176.4°
H1BC1BOC'CD'25.3°30.1°
C5BC6BH6B1H6B2113.7°120.1°
C6BC5BC4BC3B0.5°51.4°
C6BC5BC4BC7B179.4°128.6°
C6BC5BC4BH5B1125.2°119.7°
C6BC5BC4BH5B2125.2°119.7°
C6BC5BH5B1H5B2115.1°120.5°
H6B1C6BC5BC4B124.8°65.3°
H6B1C6BC5BH5B10.4°175.0°
H6B1C6BC5BH5B2109.9°54.4°
H6B2C6BC5BC4B125.7°174.6°
H6B2C6BC5BH5B1109.1°54.9°
H6B2C6BC5BH5B20.4°65.7°
C3BC2BH2B1H2B2114.3°120.0°
C2BC3BC4BH3B1125.3°119.7°
C2BC3BC4BH3B2125.3°119.7°
C2BC3BH3B1H3B2114.1°120.5°
C2BC3BC4BC7B179.6°128.6°
C2BC3BC4BC5B0.7°51.3°
H2B1C2BC3BC4B126.0°174.6°
H2B1C2BC3BH3B10.7°54.9°
H2B1C2BC3BH3B2108.7°65.7°
H2B2C2BC3BC4B124.5°65.3°
H2B2C2BC3BH3B1110.2°175.0°
H2B2C2BC3BH3B20.7°54.3°
C4BC3BH3B1H3B2114.2°120.4°
C3BC4BC7BC5B178.9°180.0°
C3BC4BC7BH7B1.1°5.0°
C3BC4BC5BH5B1125.8°68.4°
C3BC4BC5BH5B2124.7°171.1°
H3B1C3BC4BC7B54.3°111.6°
H3B1C3BC4BC5B124.6°68.4°
H3B2C3BC4BC7B55.2°8.9°
H3B2C3BC4BC5B126.0°171.1°
C7BC4BC5BH5B155.4°111.6°
C7BC4BC5BH5B254.1°8.9°
C5BC4BC7BH7B177.8°175.0°
C4BC5BH5B1H5B2115.2°120.4°
OC'CD'C3'HD'1125.3°120.0°
OC'CD'C3'HD'2125.3°120.1°
OC'CD'HD'1HD'2119.1°120.0°
OC'CD'C3'O3'30.4°60.1°
OC'CD'C3'H3'194.9°60.0°
OC'CD'C3'H3'2155.7°180.0°
C3'CD'HD'1HD'2119.0°120.0°
CD'C3'O3'H3'1125.2°120.0°
CD'C3'O3'H3'2125.3°120.0°
CD'C3'H3'1H3'2118.7°120.0°
CD'C3'O3'HO3'180.0°180.0°
HD'1CD'C3'O3'155.6°179.9°
HD'1CD'C3'H3'130.4°60.0°
HD'1CD'C3'H3'279.1°60.0°
HD'2CD'C3'O3'94.9°60.0°
HD'2CD'C3'H3'1139.8°180.0°
HD'2CD'C3'H3'230.4°60.0°
O3'C3'H3'1H3'2118.8°120.0°
H3'1C3'O3'HO3'54.8°59.9°
H3'2C3'O3'HO3'54.7°60.1°

224931

PDB entries from 2024-09-11

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