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RYU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.38Å1.45ÅAromatic
C1C6sing1.37Å1.45ÅAromatic
C1H1sing1.08Å1.10Å
C2C3sing1.38Å1.45ÅAromatic
C2H2sing1.08Å1.10Å
C3C4doub1.38Å1.45ÅAromatic
C3H3sing1.08Å1.10Å
C4C5sing1.39Å1.45ÅAromatic
C4H4sing1.08Å1.10Å
C5C6doub1.39Å1.44ÅAromatic
C5N9sing1.39Å1.41Å
C6C7sing1.51Å1.45Å
C7C71sing1.53Å1.50Å
C7O71sing1.43Å1.34Å
C7C8sing1.51Å1.46Å
C71H711sing1.09Å1.11Å
C71H712sing1.09Å1.11Å
C71H713sing1.09Å1.11Å
O71H71sing0.97Å0.95Å
C8N9sing1.36Å1.41Å
C8C10doub1.36Å1.45Å
N9H9sing0.97Å1.02Å
C10C11sing1.47Å1.51Å
C10C14sing1.48Å1.45Å
C11O11doub1.22Å1.23Å
C11N12sing1.34Å1.33Å
N12C13sing1.39Å1.41Å
N12H12sing0.97Å1.02Å
C13C14doub1.40Å1.45ÅAromatic
C13C18sing1.39Å1.45ÅAromatic
C14C15sing1.39Å1.45ÅAromatic
C15C16doub1.38Å1.45ÅAromatic
C15H15sing1.08Å1.10Å
C16C17sing1.38Å1.46ÅAromatic
C16S19sing1.76Å1.80Å
C17C18doub1.38Å1.46ÅAromatic
C17H17sing1.08Å1.10Å
C18H18sing1.08Å1.10Å
S19O19doub1.42Å1.75Å
S19O1doub1.42Å1.73Å
S19N20sing1.66Å1.78Å
N20C21sing1.47Å1.48Å
N20C25sing1.47Å1.47Å
C21C22sing1.53Å1.53Å
C21H211sing1.09Å1.12Å
C21H212sing1.09Å1.11Å
C22C23sing1.53Å1.53Å
C22H221sing1.09Å1.12Å
C22H222sing1.09Å1.11Å
C23O23sing1.43Å1.43Å
C23C24sing1.53Å1.53Å
C23H23sing1.09Å1.11Å
O23HAsing0.97Å0.95Å
C24C25sing1.53Å1.52Å
C24H241sing1.09Å1.11Å
C24H242sing1.09Å1.12Å
C25H251sing1.09Å1.11Å
C25H252sing1.09Å1.12Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6116.2°120.0°
C2C1H1121.9°120.0°
C1C2C3121.7°119.9°
C1C2H2119.2°120.0°
C6C1H1121.9°120.0°
C1C6C5121.5°120.7°
C1C6C7128.3°132.9°
C3C2H2119.1°120.1°
C2C3C4120.9°120.4°
C2C3H3119.6°119.9°
C4C3H3119.6°119.8°
C3C4C5116.4°120.1°
C3C4H4121.8°119.9°
C5C4H4121.8°119.9°
C4C5C6121.7°118.9°
C4C5N9128.3°130.7°
C6C5N9109.9°110.4°
C5C6C7110.2°106.4°
C5N9C8102.8°112.0°
C5N9H9128.6°124.0°
C6C7C71108.5°110.5°
C6C7O71111.0°110.5°
C6C7C899.8°104.3°
C71C7O71108.4°110.4°
C71C7C8114.8°110.5°
C7C71H711108.4°109.5°
C7C71H712112.6°109.5°
C7C71H713112.6°109.5°
O71C7C8114.1°110.5°
C7O71H71111.0°106.9°
C7C8N9116.3°106.9°
C7C8C10125.4°126.5°
H711C71H712112.6°109.4°
H711C71H713112.6°109.5°
H712C71H71397.9°109.5°
N9C8C10118.2°126.6°
C8N9H9128.6°124.0°
C8C10C11127.1°127.4°
C8C10C14131.1°127.5°
C11C10C1499.9°105.0°
C10C11O11120.5°125.9°
C10C11N12118.7°108.1°
C10C14C13106.1°106.4°
C10C14C15128.4°133.3°
O11C11N12120.8°126.0°
C11N12C13100.7°111.4°
C11N12H12129.7°124.4°
C13N12H12129.7°124.2°
N12C13C14114.6°109.1°
N12C13C18126.2°131.7°
C14C13C18119.0°119.1°
C13C14C15125.3°120.4°
C13C18C17117.0°120.0°
C13C18H18121.5°120.0°
C14C15C16113.5°119.7°
C14C15H15123.2°120.1°
C16C15H15123.2°120.1°
C15C16C17121.8°120.1°
C15C16S19125.1°120.0°
C17C16S19113.0°120.0°
C16C17C18121.9°120.7°
C16C17H17119.0°119.7°
C16S19O19104.2°105.7°
C16S19O193.9°105.8°
C16S19N20125.4°107.4°
C18C17H17119.1°119.6°
C17C18H18121.5°120.0°
O19S19O1118.5°125.4°
O19S19N20101.7°105.8°
O1S19N20114.1°105.7°
S19N20C21122.4°120.6°
S19N20C25120.2°120.7°
C21N20C25116.1°118.7°
N20C21C22111.9°108.8°
N20C21H211111.3°109.6°
N20C21H212111.3°109.6°
N20C25C24111.3°109.1°
N20C25H251111.5°109.7°
N20C25H252111.5°109.3°
C22C21H211111.3°109.6°
C22C21H212111.3°109.6°
C21C22C23113.1°109.3°
C21C22H221110.9°109.5°
C21C22H222110.9°109.5°
H211C21H21299.0°109.6°
C23C22H221110.9°109.5°
C23C22H222110.9°109.4°
C22C23O23115.0°109.5°
C22C23C24111.2°109.5°
C22C23H23105.0°109.4°
H221C22H22299.5°109.5°
O23C23C24114.3°109.5°
O23C23H23105.0°109.4°
C23O23HA115.0°106.8°
C24C23H23105.1°109.4°
C23C24C25112.7°109.4°
C23C24H241111.0°109.5°
C23C24H242111.0°109.5°
C25C24H241111.0°109.6°
C25C24H242111.0°109.4°
C24C25H251111.5°109.6°
C24C25H252111.5°109.6°
H241C24H24299.3°109.5°
H251C25H25298.9°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°180.0°
C1C2C3H2180.0°179.9°
C1C2C3C411.4°0.1°
C1C2C3H3168.6°180.0°
C2C1C6C53.0°0.1°
C2C1C6C7178.0°179.9°
C6C1C2C38.5°0.1°
C6C1C2H2171.6°180.0°
C1C6C5C412.0°0.1°
C1C6C5C7179.2°179.8°
C1C6C5N9169.6°180.0°
C1C6C7C7149.6°61.2°
C1C6C7O7169.3°61.3°
C1C6C7C8170.0°179.9°
H1C1C2C3171.5°179.9°
H1C1C2H28.4°0.0°
H1C1C6C5177.0°179.9°
H1C1C6C72.0°0.1°
C2C3C4H3180.0°179.9°
C2C3C4C52.4°0.1°
C2C3C4H4177.6°179.9°
H2C2C3C4168.6°180.0°
H2C2C3H311.4°0.1°
C3C4C5H4180.0°180.0°
C3C4C5C68.9°0.1°
C3C4C5N9172.9°180.0°
H3C3C4C5177.6°180.0°
H3C3C4H42.4°0.0°
C4C5C6N9178.5°179.9°
C4C5C6C7168.8°180.0°
C4C5N9C8173.1°180.0°
C4C5N9H96.9°0.0°
H4C4C5C6171.0°179.9°
H4C4C5N97.1°0.0°
C5C6C7C71129.5°118.6°
C5C6C7O71111.5°118.9°
C5C6C7C89.1°0.1°
C6C5N9C85.2°0.1°
C6C5N9H9174.8°179.9°
N9C5C6C79.7°0.1°
C5N9C8C70.9°0.0°
C5N9C8H9180.0°180.0°
C5N9C8C10175.0°180.0°
C6C7C71O71120.6°122.5°
C6C7C71C8110.6°114.9°
C6C7O71C8111.8°115.0°
C6C7C71H711180.0°69.2°
C6C7C71H71254.7°50.8°
C6C7C71H71354.7°170.8°
C6C7O71H71180.0°63.1°
C6C7C8N96.3°0.0°
C6C7C8C10169.3°179.9°
C71C7O71C8129.2°122.5°
C7C71H711H712125.3°120.0°
C7C71H711H713125.2°120.1°
C7C71H712H713118.5°120.0°
C71C7O71H7161.0°59.4°
C71C7C8N9122.0°118.7°
C71C7C8C1053.6°61.3°
O71C7C71H71159.4°53.4°
O71C7C71H712175.3°173.3°
O71C7C71H71365.8°66.7°
O71C7C8N9112.1°118.8°
O71C7C8C1072.4°61.1°
C8C7C71H71169.4°175.9°
C8C7C71H71255.9°64.1°
C8C7C71H713165.4°55.9°
C8C7O71H7168.2°178.1°
C7C8N9C10175.9°180.0°
C7C8N9H9179.1°180.0°
C7C8C10C11158.6°173.5°
C7C8C10C142.3°6.9°
H711C71H712H713118.5°120.0°
N9C8C10C1116.9°6.5°
N9C8C10C14177.8°173.1°
C10C8N9H95.0°0.0°
C8C10C11C14165.5°179.7°
C8C10C11O1112.1°0.0°
C8C10C11N12165.5°179.9°
C8C10C14C13163.4°179.9°
C8C10C14C1512.1°0.7°
C10C11O11N12177.6°179.9°
C10C11N12C131.3°0.1°
C10C11N12H12178.8°180.0°
C11C10C14C131.3°0.4°
C11C10C14C15176.8°179.6°
C14C10C11O11177.6°179.7°
C14C10C11N120.0°0.2°
C10C14C13N122.3°0.4°
C10C14C13C15175.7°179.3°
C10C14C13C18174.9°179.9°
C10C14C15C16165.2°179.7°
C10C14C15H1514.8°0.6°
O11C11N12C13176.4°180.0°
O11C11N12H123.6°0.1°
C11N12C13H12180.0°179.9°
C11N12C13C142.1°0.3°
C11N12C13C18174.9°180.0°
N12C13C14C18177.2°179.7°
N12C13C14C15177.9°179.7°
N12C13C18C17173.0°179.9°
N12C13C18H187.0°0.1°
H12N12C13C14177.9°179.8°
H12N12C13C185.1°0.1°
C13C14C15C169.5°0.6°
C13C14C15H15170.5°179.7°
C14C13C18C173.9°0.2°
C14C13C18H18176.1°179.7°
C18C13C14C150.7°0.5°
C13C18C17C160.7°0.0°
C13C18C17H18180.0°180.0°
C13C18C17H17179.3°180.0°
C14C15C16H15180.0°179.8°
C14C15C16C1713.9°0.3°
C14C15C16S19162.1°179.8°
C15C16C17S19176.4°180.0°
C15C16C17C1810.4°0.0°
C15C16C17H17169.6°180.0°
C15C16S19O1996.8°22.6°
C15C16S19O1142.4°157.4°
C15C16S19N2019.0°90.0°
H15C15C16C17166.1°180.0°
H15C15C16S1917.9°0.0°
C16C17C18H17180.0°180.0°
C16C17C18H18179.3°180.0°
C17C16S19O1979.5°157.3°
C17C16S19O141.3°22.6°
C17C16S19N20164.7°90.0°
S19C16C17C18166.1°179.9°
S19C16C17H1713.9°0.1°
C16S19O19O1102.5°123.1°
C16S19O19N20131.5°113.8°
C16S19O1N20131.8°113.7°
C16S19N20C21146.6°90.0°
C16S19N20C2520.0°90.3°
H17C17C18H180.7°0.0°
O19S19O1N20119.8°123.2°
O19S19N20C2129.6°22.6°
O19S19N20C25137.0°157.1°
O1S19N20C2199.3°157.4°
O1S19N20C2594.1°22.3°
S19N20C21C25167.1°179.7°
S19N20C21C22116.4°126.4°
S19N20C21H211118.4°113.8°
S19N20C21H2128.9°6.6°
S19N20C25C24114.9°126.4°
S19N20C25H25110.4°6.4°
S19N20C25H252119.9°113.8°
N20C21C22H211125.2°119.9°
N20C21C22H212125.3°119.8°
N20C21H211H212117.2°120.3°
N20C21C22C2348.7°54.6°
N20C21C22H221173.9°174.6°
N20C21C22H22276.6°65.3°
C21N20C25C2452.5°53.3°
C21N20C25H251177.7°173.3°
C21N20C25H25272.8°66.5°
C25N20C21C2250.7°53.4°
C25N20C21H21174.6°66.5°
C25N20C21H212176.0°173.2°
N20C25C24C2352.4°54.4°
N20C25C24H251125.3°120.1°
N20C25C24H252125.3°119.6°
N20C25C24H24172.8°174.4°
N20C25C24H242177.7°65.5°
N20C25H251H252117.5°120.0°
C22C21H211H212117.2°120.3°
C21C22C23H221125.3°120.0°
C21C22C23H222125.2°120.0°
C21C22H221H222116.7°120.2°
C21C22C23O23178.0°178.6°
C21C22C23C2450.0°61.3°
C21C22C23H2363.1°58.6°
H211C21C22C2376.6°65.2°
H211C21C22H22148.7°54.7°
H211C21C22H222158.2°174.9°
H212C21C22C23174.0°174.4°
H212C21C22H22160.8°65.6°
H212C21C22H22248.7°54.5°
C23C22H221H222116.8°120.0°
C22C23O23C24130.4°120.1°
C22C23O23H23114.9°120.0°
C22C23C24H23113.1°120.0°
C22C23O23HA180.0°180.0°
C22C23C24C2551.9°61.2°
C22C23C24H24173.4°178.7°
C22C23C24H242177.2°58.6°
H221C22C23O2352.8°58.6°
H221C22C23C24175.3°178.7°
H221C22C23H2362.2°61.3°
H222C22C23O2356.7°61.4°
H222C22C23C2475.2°58.6°
H222C22C23H23171.7°178.6°
O23C23C24H23114.6°119.9°
O23C23C24C25175.8°178.8°
O23C23C24H24158.9°58.6°
O23C23C24H24250.5°61.4°
C24C23O23HA49.6°59.9°
C23C24C25H241125.3°120.0°
C23C24C25H242125.2°119.9°
C23C24H241H242116.9°120.0°
C23C24C25H251177.7°174.5°
C23C24C25H25272.8°65.2°
H23C23O23HA65.0°60.0°
H23C23C24C2561.2°58.8°
H23C23C24H241173.5°61.3°
H23C23C24H24264.1°178.6°
C25C24H241H242116.9°120.0°
C24C25H251H252117.4°120.3°
H241C24C25H25152.4°65.5°
H241C24C25H252161.9°54.8°
H242C24C25H25157.1°54.6°
H242C24C25H25252.4°174.9°

224931

PDB entries from 2024-09-11

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