RXR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | O1 | sing | 0.00Å | 1.27Å | |
N1 | C2 | sing | 0.00Å | 1.46Å | |
N1 | C5 | sing | 0.00Å | 1.46Å | |
C2 | C3 | sing | 0.00Å | 1.51Å | |
C2 | C8 | sing | 0.00Å | 1.52Å | |
C2 | C9 | sing | 0.00Å | 1.52Å | |
C3 | C4 | doub | 0.00Å | 1.33Å | |
C3 | CE | sing | 0.00Å | 1.51Å | |
C4 | C5 | sing | 0.00Å | 1.51Å | |
C4 | C10 | sing | 0.00Å | 1.51Å | |
C5 | C6 | sing | 0.00Å | 1.52Å | |
C5 | C7 | sing | 0.00Å | 1.52Å | |
C6 | H6 | sing | 0.00Å | 1.10Å | |
C6 | H6A | sing | 0.00Å | 1.10Å | |
C6 | H6B | sing | 0.00Å | 1.10Å | |
C7 | H7 | sing | 0.00Å | 1.10Å | |
C7 | H7A | sing | 0.00Å | 1.10Å | |
C7 | H7B | sing | 0.00Å | 1.10Å | |
C8 | H8 | sing | 0.00Å | 1.10Å | |
C8 | H8A | sing | 0.00Å | 1.10Å | |
C8 | H8B | sing | 0.00Å | 1.10Å | |
C9 | H9 | sing | 0.00Å | 1.10Å | |
C9 | H9A | sing | 0.00Å | 1.10Å | |
C9 | H9B | sing | 0.00Å | 1.10Å | |
SD | CE | sing | 0.00Å | 1.77Å | |
SD | HSD | sing | 0.00Å | 1.30Å | |
CE | HE | sing | 0.00Å | 1.10Å | |
CE | HEA | sing | 0.00Å | 1.10Å | |
C10 | S10 | sing | 0.00Å | 1.81Å | |
C10 | H10 | sing | 0.00Å | 1.10Å | |
C10 | H10A | sing | 0.00Å | 1.10Å | |
S10 | HS10 | sing | 0.00Å | 1.30Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | N1 | C2 | 123.3° | 90.0° |
O1 | N1 | C5 | 123.3° | 90.0° |
C2 | N1 | C5 | 113.4° | 90.0° |
N1 | C2 | C3 | 101.6° | 90.0° |
N1 | C2 | C8 | 111.5° | 90.0° |
N1 | C2 | C9 | 112.9° | 90.0° |
N1 | C5 | C4 | 101.8° | 90.0° |
N1 | C5 | C6 | 112.1° | 90.0° |
N1 | C5 | C7 | 111.1° | 90.0° |
C3 | C2 | C8 | 109.2° | 90.0° |
C3 | C2 | C9 | 109.8° | 90.0° |
C2 | C3 | C4 | 111.7° | 90.0° |
C2 | C3 | CE | 122.5° | 90.0° |
C8 | C2 | C9 | 111.4° | 90.0° |
C2 | C8 | H8 | 109.5° | 90.0° |
C2 | C8 | H8A | 109.5° | 90.0° |
C2 | C8 | H8B | 109.5° | 90.0° |
C2 | C9 | H9 | 109.5° | 90.0° |
C2 | C9 | H9A | 109.4° | 90.0° |
C2 | C9 | H9B | 109.5° | 90.0° |
C4 | C3 | CE | 125.8° | 90.0° |
C3 | C4 | C5 | 111.1° | 90.0° |
C3 | C4 | C10 | 124.8° | 90.0° |
C3 | CE | SD | 110.3° | 90.0° |
C3 | CE | HE | 109.2° | 90.0° |
C3 | CE | HEA | 109.2° | 90.0° |
C5 | C4 | C10 | 124.2° | 90.0° |
C4 | C5 | C6 | 110.2° | 90.0° |
C4 | C5 | C7 | 110.0° | 90.0° |
C4 | C10 | S10 | 110.6° | 90.0° |
C4 | C10 | H10 | 109.1° | 90.0° |
C4 | C10 | H10A | 109.1° | 90.0° |
C6 | C5 | C7 | 111.3° | 90.0° |
C5 | C6 | H6 | 109.5° | 90.0° |
C5 | C6 | H6A | 109.5° | 90.0° |
C5 | C6 | H6B | 109.5° | 90.0° |
C5 | C7 | H7 | 109.5° | 90.0° |
C5 | C7 | H7A | 109.5° | 90.0° |
C5 | C7 | H7B | 109.5° | 90.0° |
H6 | C6 | H6A | 109.5° | 90.0° |
H6 | C6 | H6B | 109.4° | 90.0° |
H6A | C6 | H6B | 109.5° | 90.0° |
H7 | C7 | H7A | 109.5° | 90.0° |
H7 | C7 | H7B | 109.4° | 90.0° |
H7A | C7 | H7B | 109.5° | 90.0° |
H8 | C8 | H8A | 109.5° | 90.0° |
H8 | C8 | H8B | 109.4° | 90.0° |
H8A | C8 | H8B | 109.5° | 90.0° |
H9 | C9 | H9A | 109.5° | 90.0° |
H9 | C9 | H9B | 109.4° | 90.0° |
H9A | C9 | H9B | 109.5° | 90.0° |
CE | SD | HSD | 102.0° | 90.0° |
SD | CE | HE | 109.2° | 90.0° |
SD | CE | HEA | 109.2° | 90.0° |
HE | CE | HEA | 109.7° | 90.0° |
S10 | C10 | H10 | 109.1° | 90.0° |
S10 | C10 | H10A | 109.1° | 90.0° |
C10 | S10 | HS10 | 102.0° | 90.0° |
H10 | C10 | H10A | 109.9° | 90.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | N1 | C2 | C5 | 179.9° | 90.0° |
O1 | N1 | C2 | C3 | 175.8° | 90.0° |
O1 | N1 | C2 | C8 | 68.0° | 90.0° |
O1 | N1 | C2 | C9 | 58.3° | 90.0° |
O1 | N1 | C5 | C4 | 179.5° | 90.0° |
O1 | N1 | C5 | C6 | 62.8° | 90.0° |
O1 | N1 | C5 | C7 | 62.5° | 90.0° |
N1 | C2 | C3 | C8 | 117.9° | 90.0° |
N1 | C2 | C3 | C9 | 119.8° | 90.0° |
N1 | C2 | C8 | C9 | 127.2° | 90.0° |
N1 | C2 | C3 | C4 | 6.9° | 90.0° |
N1 | C2 | C3 | CE | 172.1° | 90.0° |
C2 | N1 | C5 | C4 | 0.6° | 90.0° |
C2 | N1 | C5 | C6 | 117.1° | 90.0° |
C2 | N1 | C5 | C7 | 117.6° | 90.0° |
N1 | C2 | C8 | H8 | 180.0° | 90.0° |
N1 | C2 | C8 | H8A | 60.0° | 90.0° |
N1 | C2 | C8 | H8B | 60.0° | 90.0° |
N1 | C2 | C9 | H9 | 180.0° | 90.0° |
N1 | C2 | C9 | H9A | 60.0° | 90.0° |
N1 | C2 | C9 | H9B | 60.0° | 90.0° |
C5 | N1 | C2 | C3 | 4.2° | 90.0° |
C5 | N1 | C2 | C8 | 111.9° | 90.0° |
C5 | N1 | C2 | C9 | 121.7° | 90.0° |
N1 | C5 | C4 | C3 | 4.0° | 90.0° |
N1 | C5 | C4 | C6 | 119.1° | 90.0° |
N1 | C5 | C4 | C7 | 117.9° | 90.0° |
N1 | C5 | C4 | C10 | 175.1° | 90.0° |
N1 | C5 | C6 | C7 | 125.2° | 90.0° |
N1 | C5 | C6 | H6 | 180.0° | 90.0° |
N1 | C5 | C6 | H6A | 60.0° | 90.0° |
N1 | C5 | C6 | H6B | 60.0° | 90.0° |
N1 | C5 | C7 | H7 | 180.0° | 90.0° |
N1 | C5 | C7 | H7A | 60.0° | 90.0° |
N1 | C5 | C7 | H7B | 60.0° | 90.0° |
C3 | C2 | C8 | C9 | 121.4° | 90.0° |
C2 | C3 | C4 | CE | 178.9° | 90.0° |
C2 | C3 | C4 | C5 | 7.1° | 90.0° |
C2 | C3 | C4 | C10 | 172.1° | 90.0° |
C3 | C2 | C8 | H8 | 68.6° | 90.0° |
C3 | C2 | C8 | H8A | 51.4° | 90.0° |
C3 | C2 | C8 | H8B | 171.4° | 90.0° |
C3 | C2 | C9 | H9 | 67.4° | 90.0° |
C3 | C2 | C9 | H9A | 172.5° | 90.0° |
C3 | C2 | C9 | H9B | 52.5° | 90.0° |
C2 | C3 | CE | SD | 104.5° | 90.0° |
C2 | C3 | CE | HE | 135.5° | 90.0° |
C2 | C3 | CE | HEA | 15.5° | 90.0° |
C8 | C2 | C3 | C4 | 111.0° | 90.0° |
C8 | C2 | C3 | CE | 70.0° | 90.0° |
C2 | C8 | H8 | H8A | 120.0° | 90.0° |
C2 | C8 | H8 | H8B | 120.0° | 90.0° |
C2 | C8 | H8A | H8B | 120.0° | 90.0° |
C8 | C2 | C9 | H9 | 53.6° | 90.0° |
C8 | C2 | C9 | H9A | 66.4° | 90.0° |
C8 | C2 | C9 | H9B | 173.6° | 90.0° |
C9 | C2 | C3 | C4 | 126.7° | 90.0° |
C9 | C2 | C3 | CE | 52.3° | 90.0° |
C9 | C2 | C8 | H8 | 52.8° | 90.0° |
C9 | C2 | C8 | H8A | 172.8° | 90.0° |
C9 | C2 | C8 | H8B | 67.2° | 90.0° |
C2 | C9 | H9 | H9A | 120.0° | 90.0° |
C2 | C9 | H9 | H9B | 120.0° | 90.0° |
C2 | C9 | H9A | H9B | 120.0° | 90.0° |
C3 | C4 | C5 | C10 | 179.1° | 90.0° |
C3 | C4 | C5 | C6 | 123.1° | 90.0° |
C3 | C4 | C5 | C7 | 113.9° | 90.0° |
C4 | C3 | CE | SD | 74.3° | 90.0° |
C4 | C3 | CE | HE | 45.7° | 90.0° |
C4 | C3 | CE | HEA | 165.6° | 90.0° |
C3 | C4 | C10 | S10 | 90.6° | 90.0° |
C3 | C4 | C10 | H10 | 29.4° | 90.0° |
C3 | C4 | C10 | H10A | 149.5° | 90.0° |
CE | C3 | C4 | C5 | 171.9° | 90.0° |
CE | C3 | C4 | C10 | 9.0° | 90.0° |
C3 | CE | SD | HE | 120.0° | 90.0° |
C3 | CE | SD | HEA | 120.0° | 90.0° |
C3 | CE | SD | HSD | 180.0° | 90.0° |
C3 | CE | HE | HEA | 119.7° | 90.0° |
C4 | C5 | C6 | C7 | 122.2° | 90.0° |
C4 | C5 | C6 | H6 | 67.4° | 90.0° |
C4 | C5 | C6 | H6A | 172.6° | 90.0° |
C4 | C5 | C6 | H6B | 52.6° | 90.0° |
C4 | C5 | C7 | H7 | 68.1° | 90.0° |
C4 | C5 | C7 | H7A | 51.9° | 90.0° |
C4 | C5 | C7 | H7B | 171.9° | 90.0° |
C5 | C4 | C10 | S10 | 88.5° | 90.0° |
C5 | C4 | C10 | H10 | 151.6° | 90.0° |
C5 | C4 | C10 | H10A | 31.5° | 90.0° |
C10 | C4 | C5 | C6 | 56.0° | 90.0° |
C10 | C4 | C5 | C7 | 67.0° | 90.0° |
C4 | C10 | S10 | H10 | 120.0° | 90.0° |
C4 | C10 | S10 | H10A | 120.0° | 90.0° |
C4 | C10 | H10 | H10A | 119.5° | 90.0° |
C4 | C10 | S10 | HS10 | 180.0° | 90.0° |
C5 | C6 | H6 | H6A | 120.0° | 90.0° |
C5 | C6 | H6 | H6B | 120.0° | 90.0° |
C5 | C6 | H6A | H6B | 120.0° | 90.0° |
C6 | C5 | C7 | H7 | 54.3° | 90.0° |
C6 | C5 | C7 | H7A | 174.3° | 90.0° |
C6 | C5 | C7 | H7B | 65.7° | 90.0° |
C7 | C5 | C6 | H6 | 54.8° | 90.0° |
C7 | C5 | C6 | H6A | 65.2° | 90.0° |
C7 | C5 | C6 | H6B | 174.8° | 90.0° |
C5 | C7 | H7 | H7A | 120.0° | 90.0° |
C5 | C7 | H7 | H7B | 120.0° | 90.0° |
C5 | C7 | H7A | H7B | 120.0° | 90.0° |
H6 | C6 | H6A | H6B | 120.0° | 90.0° |
H7 | C7 | H7A | H7B | 120.0° | 90.0° |
H8 | C8 | H8A | H8B | 120.0° | 90.0° |
H9 | C9 | H9A | H9B | 120.0° | 90.0° |
SD | CE | HE | HEA | 119.7° | 90.0° |
HSD | SD | CE | HE | 60.0° | 90.0° |
HSD | SD | CE | HEA | 60.0° | 90.0° |
S10 | C10 | H10 | H10A | 119.5° | 90.0° |
H10 | C10 | S10 | HS10 | 60.0° | 90.0° |
H10A | C10 | S10 | HS10 | 60.0° | 90.0° |