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RX9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OCdoub1.21Å1.24Å
CCAsing1.48Å1.42Å
CD1CG1sing1.53Å1.49Å
CG1CBsing1.51Å1.51Å
CACBdoub1.34Å1.40Å
CANsing1.40Å1.42Å
CBCG2sing1.51Å1.50Å
COXTsing1.35Å1.34Å
NHsing0.97Å1.00Å
NH2sing0.97Å1.00Å
CG1HG12sing1.09Å1.10Å
CG1HG13sing1.09Å1.10Å
CG2HG21sing1.09Å1.10Å
CG2HG22sing1.09Å1.10Å
CG2HG23sing1.09Å1.10Å
CD1HD11sing1.09Å1.10Å
CD1HD12sing1.09Å1.10Å
CD1HD13sing1.09Å1.10Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCCA120.3°120.0°
OCOXT122.9°120.0°
CCACB126.3°120.0°
CCAN116.3°120.0°
CACOXT116.8°120.0°
CD1CG1CB115.9°109.5°
CD1CG1HG12107.8°109.4°
CD1CG1HG13107.9°109.5°
CG1CD1HD11109.5°109.5°
CG1CD1HD12109.5°109.5°
CG1CD1HD13109.5°109.5°
CG1CBCA124.9°120.0°
CG1CBCG2113.7°120.0°
CBCG1HG12107.8°109.5°
CBCG1HG13107.9°109.5°
CBCAN117.5°120.0°
CACBCG2121.4°120.0°
CANH109.5°119.9°
CANH2109.5°120.0°
CBCG2HG21109.5°109.4°
CBCG2HG22109.5°109.5°
CBCG2HG23109.4°109.5°
COXTHXT109.5°117.0°
HNH2109.5°120.0°
HG12CG1HG13109.5°109.5°
HG21CG2HG22109.5°109.5°
HG21CG2HG23109.5°109.4°
HG22CG2HG23109.5°109.5°
HD11CD1HD12109.4°109.5°
HD11CD1HD13109.5°109.4°
HD12CD1HD13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCCAOXT179.6°180.0°
OCCACB56.8°6.6°
OCCAN122.6°173.3°
OCOXTHXT0.0°0.0°
CCACBCG10.9°7.6°
CCACBN179.4°179.9°
CCACBCG2177.7°172.4°
CCANH180.0°180.0°
CCANH260.0°0.2°
CACOXTHXT179.6°180.0°
CD1CG1CBHG12120.9°120.0°
CD1CG1CBHG13120.9°120.0°
CD1CG1CBCA72.4°92.1°
CD1CG1CBCG2108.9°87.9°
CD1CG1HG12HG13117.1°120.0°
CG1CD1HD11HD12120.0°120.1°
CG1CD1HD11HD13120.0°120.0°
CG1CD1HD12HD13120.0°120.1°
CG1CBCACG2178.6°180.0°
CG1CBCAN179.7°172.4°
CBCG1HG12HG13117.1°120.0°
CG1CBCG2HG21180.0°90.0°
CG1CBCG2HG2260.0°30.0°
CG1CBCG2HG2360.0°150.0°
CBCG1CD1HD11180.0°60.1°
CBCG1CD1HD1260.0°60.0°
CBCG1CD1HD1360.0°180.0°
CBCACOXT123.6°173.4°
CBCANH0.6°0.1°
CBCANH2119.5°179.8°
CACBCG1HG12166.7°147.9°
CACBCG1HG1348.5°27.9°
CACBCG2HG211.3°90.0°
CACBCG2HG22121.3°150.0°
CACBCG2HG23118.7°30.0°
NCACBCG21.7°7.6°
NCACOXT57.0°6.7°
CANHH2120.0°179.8°
CG2CBCG1HG1212.0°32.1°
CG2CBCG1HG13130.1°152.1°
CBCG2HG21HG22120.0°120.0°
CBCG2HG21HG23120.0°120.0°
CBCG2HG22HG23120.0°120.0°
HG12CG1CD1HD1159.1°180.0°
HG12CG1CD1HD1260.9°60.0°
HG12CG1CD1HD13179.1°60.0°
HG13CG1CD1HD1159.1°60.0°
HG13CG1CD1HD12179.0°180.0°
HG13CG1CD1HD1360.9°59.9°
HG21CG2HG22HG23120.0°120.0°
HD11CD1HD12HD13120.0°119.9°

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PDB entries from 2024-09-11

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