RVP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | O1P | sing | 1.61Å | 1.49Å | |
| P | O2P | sing | 1.61Å | 1.50Å | |
| P | O3P | doub | 1.48Å | 1.56Å | |
| P | O5' | sing | 1.61Å | 1.59Å | |
| O1P | HOP1 | sing | 0.97Å | 0.95Å | |
| O2P | HOP2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.48Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.44Å | |
| C3' | O3' | sing | 1.43Å | 1.41Å | |
| C3' | C2' | sing | 1.55Å | 1.50Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO'3 | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO'2 | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.47Å | 1.52Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| N9 | C8 | sing | 1.35Å | 1.39Å | Aromatic |
| N9 | N4 | sing | 1.29Å | 1.39Å | Aromatic |
| C8 | N7 | doub | 1.31Å | 1.29Å | Aromatic |
| C8 | HC8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.35Å | 1.36Å | Aromatic |
| C5 | C6 | sing | 1.48Å | 1.46Å | |
| C5 | N4 | doub | 1.31Å | 1.39Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| C6 | N1 | sing | 1.35Å | 1.44Å | |
| N1 | HN1 | sing | 0.97Å | 1.02Å | |
| N1 | HN2 | sing | 0.97Å | 1.02Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1P | P | O2P | 108.4° | 109.4° |
| O1P | P | O3P | 112.2° | 109.5° |
| O1P | P | O5' | 114.8° | 109.5° |
| P | O1P | HOP1 | 108.5° | 106.9° |
| O2P | P | O3P | 109.9° | 109.4° |
| O2P | P | O5' | 108.2° | 109.5° |
| P | O2P | HOP2 | 108.5° | 106.8° |
| O3P | P | O5' | 103.1° | 109.5° |
| P | O5' | C5' | 119.2° | 106.8° |
| O5' | C5' | C4' | 111.1° | 109.5° |
| O5' | C5' | H5'1 | 111.6° | 109.4° |
| O5' | C5' | H5'2 | 111.6° | 109.6° |
| C4' | C5' | H5'1 | 111.6° | 109.4° |
| C4' | C5' | H5'2 | 111.6° | 109.4° |
| C5' | C4' | O4' | 105.7° | 110.3° |
| C5' | C4' | C3' | 120.4° | 110.6° |
| C5' | C4' | H4' | 103.0° | 110.3° |
| H5'1 | C5' | H5'2 | 98.7° | 109.5° |
| O4' | C4' | C3' | 103.3° | 104.8° |
| O4' | C4' | H4' | 120.3° | 110.4° |
| C4' | O4' | C1' | 107.3° | 105.3° |
| C3' | C4' | H4' | 105.4° | 110.4° |
| C4' | C3' | O3' | 114.1° | 110.5° |
| C4' | C3' | C2' | 102.4° | 104.1° |
| C4' | C3' | H3' | 113.0° | 110.4° |
| O4' | C1' | C2' | 107.9° | 104.9° |
| O4' | C1' | N9 | 107.9° | 110.4° |
| O4' | C1' | H1' | 113.1° | 110.4° |
| O3' | C3' | C2' | 114.3° | 110.6° |
| O3' | C3' | H3' | 100.8° | 110.5° |
| C3' | O3' | HO'3 | 114.1° | 106.8° |
| C2' | C3' | H3' | 112.8° | 110.6° |
| C3' | C2' | O2' | 113.7° | 110.5° |
| C3' | C2' | C1' | 101.6° | 104.0° |
| C3' | C2' | H2' | 113.9° | 110.5° |
| O2' | C2' | C1' | 114.7° | 110.8° |
| O2' | C2' | H2' | 100.7° | 110.5° |
| C2' | O2' | HO'2 | 113.7° | 106.7° |
| C1' | C2' | H2' | 112.9° | 110.4° |
| C2' | C1' | N9 | 113.8° | 110.4° |
| C2' | C1' | H1' | 107.1° | 110.3° |
| N9 | C1' | H1' | 107.1° | 110.3° |
| C1' | N9 | C8 | 133.2° | 125.7° |
| C1' | N9 | N4 | 121.8° | 125.7° |
| C8 | N9 | N4 | 105.1° | 108.5° |
| N9 | C8 | N7 | 113.0° | 107.6° |
| N9 | C8 | HC8 | 126.7° | 126.2° |
| N9 | N4 | C5 | 105.5° | 108.7° |
| N7 | C8 | HC8 | 120.3° | 126.2° |
| C8 | N7 | C5 | 106.3° | 107.3° |
| N7 | C5 | C6 | 130.9° | 126.0° |
| N7 | C5 | N4 | 110.2° | 107.9° |
| C6 | C5 | N4 | 118.9° | 126.1° |
| C5 | C6 | O6 | 126.8° | 119.9° |
| C5 | C6 | N1 | 114.3° | 120.0° |
| O6 | C6 | N1 | 118.9° | 120.0° |
| C6 | N1 | HN1 | 118.9° | 120.0° |
| C6 | N1 | HN2 | 114.3° | 120.1° |
| HN1 | N1 | HN2 | 126.9° | 119.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1P | P | O2P | O3P | 123.0° | 120.0° |
| O1P | P | O2P | O5' | 125.1° | 120.0° |
| O1P | P | O3P | O5' | 124.1° | 120.1° |
| O1P | P | O2P | HOP2 | 179.9° | 60.0° |
| O1P | P | O5' | C5' | 57.0° | 60.1° |
| O2P | P | O3P | O5' | 115.2° | 120.0° |
| O2P | P | O1P | HOP1 | 180.0° | 60.0° |
| O2P | P | O5' | C5' | 64.2° | 179.9° |
| O3P | P | O1P | HOP1 | 58.4° | 180.0° |
| O3P | P | O2P | HOP2 | 57.0° | 60.0° |
| O3P | P | O5' | C5' | 179.4° | 60.0° |
| O5' | P | O1P | HOP1 | 58.9° | 59.9° |
| O5' | P | O2P | HOP2 | 54.8° | 180.0° |
| P | O5' | C5' | C4' | 178.6° | 180.0° |
| P | O5' | C5' | H5'1 | 56.2° | 60.0° |
| P | O5' | C5' | H5'2 | 53.3° | 60.0° |
| O5' | C5' | C4' | H5'1 | 125.3° | 119.9° |
| O5' | C5' | C4' | H5'2 | 125.3° | 120.1° |
| O5' | C5' | H5'1 | H5'2 | 117.5° | 120.1° |
| O5' | C5' | C4' | O4' | 68.1° | 61.5° |
| O5' | C5' | C4' | C3' | 175.8° | 176.9° |
| O5' | C5' | C4' | H4' | 58.9° | 60.7° |
| C4' | C5' | H5'1 | H5'2 | 117.5° | 119.9° |
| C5' | C4' | O4' | C3' | 127.3° | 119.0° |
| C5' | C4' | O4' | H4' | 115.7° | 122.2° |
| C5' | C4' | C3' | H4' | 115.6° | 122.3° |
| C5' | C4' | O4' | C1' | 153.2° | 159.5° |
| C5' | C4' | C3' | O3' | 77.9° | 98.4° |
| C5' | C4' | C3' | C2' | 158.1° | 142.9° |
| C5' | C4' | C3' | H3' | 36.5° | 24.2° |
| H5'1 | C5' | C4' | O4' | 57.2° | 178.6° |
| H5'1 | C5' | C4' | C3' | 58.9° | 63.1° |
| H5'1 | C5' | C4' | H4' | 175.8° | 59.2° |
| H5'2 | C5' | C4' | O4' | 166.6° | 58.6° |
| H5'2 | C5' | C4' | C3' | 50.5° | 56.8° |
| H5'2 | C5' | C4' | H4' | 66.4° | 179.2° |
| O4' | C4' | C3' | H4' | 127.0° | 118.8° |
| O4' | C4' | C3' | O3' | 164.7° | 142.8° |
| O4' | C4' | C3' | C2' | 40.7° | 24.0° |
| O4' | C4' | C3' | H3' | 80.9° | 94.7° |
| C4' | O4' | C1' | C2' | 1.5° | 40.4° |
| C4' | O4' | C1' | N9 | 124.9° | 159.3° |
| C4' | O4' | C1' | H1' | 116.8° | 78.4° |
| C3' | C4' | O4' | C1' | 25.9° | 40.5° |
| C4' | C3' | O3' | C2' | 117.3° | 114.7° |
| C4' | C3' | O3' | H3' | 121.4° | 122.5° |
| C4' | C3' | C2' | H3' | 121.8° | 118.6° |
| C4' | C3' | O3' | HO'3 | 180.0° | 180.0° |
| C4' | C3' | C2' | O2' | 84.9° | 118.8° |
| C4' | C3' | C2' | C1' | 38.8° | 0.1° |
| C4' | C3' | C2' | H2' | 160.5° | 118.6° |
| H4' | C4' | O4' | C1' | 91.0° | 78.3° |
| H4' | C4' | C3' | O3' | 37.7° | 24.0° |
| H4' | C4' | C3' | C2' | 86.3° | 94.8° |
| H4' | C4' | C3' | H3' | 152.1° | 146.5° |
| O4' | C1' | C2' | C3' | 23.9° | 23.9° |
| O4' | C1' | C2' | O2' | 99.2° | 142.6° |
| O4' | C1' | C2' | N9 | 119.8° | 118.9° |
| O4' | C1' | C2' | H1' | 122.1° | 118.9° |
| O4' | C1' | C2' | H2' | 146.2° | 94.7° |
| O4' | C1' | N9 | H1' | 122.1° | 122.3° |
| O4' | C1' | N9 | C8 | 89.3° | 122.9° |
| O4' | C1' | N9 | N4 | 90.7° | 57.3° |
| O3' | C3' | C2' | H3' | 114.3° | 122.7° |
| O3' | C3' | C2' | O2' | 39.0° | 0.1° |
| O3' | C3' | C2' | C1' | 162.7° | 118.8° |
| O3' | C3' | C2' | H2' | 75.6° | 122.7° |
| C2' | C3' | O3' | HO'3 | 62.7° | 65.3° |
| C3' | C2' | O2' | C1' | 116.3° | 114.7° |
| C3' | C2' | O2' | H2' | 122.2° | 122.6° |
| C3' | C2' | C1' | H2' | 122.4° | 118.5° |
| C3' | C2' | O2' | HO'2 | 180.0° | 180.0° |
| C3' | C2' | C1' | N9 | 95.9° | 142.8° |
| C3' | C2' | C1' | H1' | 145.9° | 95.1° |
| H3' | C3' | O3' | HO'3 | 58.6° | 57.5° |
| H3' | C3' | C2' | O2' | 153.3° | 122.6° |
| H3' | C3' | C2' | C1' | 82.9° | 118.5° |
| H3' | C3' | C2' | H2' | 38.7° | 0.0° |
| O2' | C2' | C1' | H2' | 114.5° | 122.7° |
| O2' | C2' | C1' | N9 | 141.0° | 98.5° |
| O2' | C2' | C1' | H1' | 22.8° | 23.6° |
| C1' | C2' | O2' | HO'2 | 63.7° | 65.3° |
| C2' | C1' | N9 | H1' | 118.2° | 122.1° |
| C2' | C1' | N9 | C8 | 30.4° | 121.5° |
| C2' | C1' | N9 | N4 | 149.5° | 58.2° |
| H2' | C2' | O2' | HO'2 | 57.8° | 57.4° |
| H2' | C2' | C1' | N9 | 26.5° | 24.2° |
| H2' | C2' | C1' | H1' | 91.7° | 146.4° |
| C1' | N9 | C8 | N4 | 180.0° | 179.8° |
| C1' | N9 | C8 | N7 | 179.9° | 180.0° |
| C1' | N9 | C8 | HC8 | 0.1° | 0.0° |
| C1' | N9 | N4 | C5 | 179.9° | 179.8° |
| H1' | C1' | N9 | C8 | 148.6° | 0.6° |
| H1' | C1' | N9 | N4 | 31.4° | 179.7° |
| N9 | C8 | N7 | HC8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C8 | N9 | N4 | C5 | 0.2° | 0.4° |
| N4 | N9 | C8 | N7 | 0.1° | 0.2° |
| N4 | N9 | C8 | HC8 | 179.8° | 179.8° |
| N9 | N4 | C5 | N7 | 0.1° | 0.4° |
| N9 | N4 | C5 | C6 | 179.6° | 179.8° |
| C8 | N7 | C5 | C6 | 179.7° | 179.9° |
| C8 | N7 | C5 | N4 | 0.0° | 0.2° |
| HC8 | C8 | N7 | C5 | 179.9° | 180.0° |
| N7 | C5 | C6 | N4 | 179.7° | 179.8° |
| N7 | C5 | C6 | O6 | 0.1° | 180.0° |
| N7 | C5 | C6 | N1 | 179.9° | 0.1° |
| C5 | C6 | O6 | N1 | 180.0° | 180.0° |
| C5 | C6 | N1 | HN1 | 0.0° | 179.9° |
| C5 | C6 | N1 | HN2 | 180.0° | 0.2° |
| N4 | C5 | C6 | O6 | 179.8° | 0.2° |
| N4 | C5 | C6 | N1 | 0.2° | 179.7° |
| O6 | C6 | N1 | HN1 | 180.0° | 0.0° |
| O6 | C6 | N1 | HN2 | 0.0° | 179.7° |
| C6 | N1 | HN1 | HN2 | 179.9° | 179.7° |
