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RVM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C3sing1.53Å1.54Å
C4C5sing1.53Å1.61Å
C5O5sing1.43Å1.49Å
C5C6sing1.53Å1.55Å
O5C1sing1.43Å1.49Å
C3O3sing1.43Å1.40Å
C3C2sing1.53Å1.59Å
O3C3Osing1.43Å1.62Å
C2O2sing1.43Å1.38Å
C2C1sing1.53Å1.55Å
O2C2Osing1.43Å1.55Å
C4H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
C6H63sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C3OH8sing1.09Å1.10Å
C3OH9sing1.09Å1.10Å
C3OH10sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2OH12sing1.09Å1.10Å
C2OH13sing1.09Å1.10Å
C2OH14sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C1O1sing1.43Å1.53Å
O1HO1sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C4C5108.6°109.1°
C4C3O3109.4°109.5°
C4C3C2109.3°109.1°
C3C4H41109.7°109.5°
C3C4H42109.7°109.6°
C4C3H3108.3°109.6°
C4C5O5110.4°109.4°
C4C5C6111.0°109.5°
C5C4H41109.7°109.5°
C5C4H42109.7°109.5°
C4C5H5107.9°109.5°
O5C5C6109.5°109.5°
C5O5C1113.9°114.1°
O5C5H5109.4°109.4°
C6C5H5108.6°109.5°
C5C6H61109.5°109.4°
C5C6H62109.5°109.4°
C5C6H63109.5°109.4°
O5C1C2110.0°109.4°
O5C1H191.4°109.5°
O5C1O1139.7°109.5°
O3C3C2112.0°109.5°
C3O3C3O116.2°114.0°
O3C3H3110.1°109.5°
C3C2O2111.8°109.5°
C3C2C1110.5°109.1°
C2C3H3107.6°109.6°
C3C2H2107.2°109.5°
O3C3OH8109.5°109.5°
O3C3OH9109.5°109.5°
O3C3OH10109.5°109.5°
O2C2C1109.7°109.5°
C2O2C2O119.8°114.0°
O2C2H2109.9°109.6°
C1C2H2107.6°109.6°
C2C1H191.3°109.4°
C2C1O1110.1°109.5°
O2C2OH12109.5°109.5°
O2C2OH13109.5°109.5°
O2C2OH14109.5°109.5°
H41C4H42109.5°109.6°
H61C6H62109.5°109.5°
H61C6H63109.5°109.5°
H62C6H63109.4°109.5°
H8C3OH9109.5°109.5°
H8C3OH10109.5°109.5°
H9C3OH10109.5°109.4°
H12C2OH13109.4°109.5°
H12C2OH14109.5°109.4°
H13C2OH14109.4°109.4°
H1C1O191.3°109.5°
C1O1HO1109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C4C5H41119.9°119.9°
C3C4C5H42119.9°119.9°
C3C4C5O557.5°57.6°
C3C4C5C6179.1°177.6°
C4C3O3C2121.4°119.5°
C4C3O3H3118.9°120.2°
C4C3C2H3117.4°120.0°
C4C3O3C3O138.5°90.0°
C4C3C2O2179.2°176.9°
C4C3C2C158.3°57.0°
C3C4H41H42120.4°120.2°
C3C4C5H562.0°62.4°
C4C3C2H258.7°62.9°
C4C5O5C6122.5°120.0°
C4C5O5H5118.6°120.0°
C4C5C6H5118.5°120.1°
C4C5O5C158.1°61.1°
C5C4C3O3179.7°176.8°
C5C4C3C257.3°57.0°
C5C4H41H42120.4°120.1°
C4C5C6H61180.0°60.0°
C4C5C6H6260.0°180.0°
C4C5C6H6360.0°60.0°
C5C4C3H359.7°63.0°
O5C5C6H5119.4°120.0°
C5O5C1C257.6°61.1°
O5C5C4H41177.3°62.3°
O5C5C4H4262.4°177.5°
O5C5C6H6157.8°60.0°
O5C5C6H62177.9°60.1°
O5C5C6H6362.2°180.0°
C5O5C1H1149.5°178.9°
C5O5C1O1116.8°58.8°
C6C5O5C1179.4°178.8°
C6C5C4H4161.1°57.7°
C6C5C4H4259.2°62.5°
C5C6H61H62120.0°120.0°
C5C6H61H63120.0°119.9°
C5C6H62H63120.0°119.9°
O5C1C2C356.2°57.6°
O5C1C2O2179.9°177.5°
O5C1C2H192.0°120.0°
O5C1C2O1176.1°120.0°
C1O5C5H560.5°58.8°
O5C1C2H260.6°62.3°
O5C1H1O1139.8°120.0°
O5C1O1HO1180.0°60.0°
O3C3C2H3121.1°120.2°
O3C3C2O257.8°63.3°
O3C3C2C1179.7°176.8°
O3C3C4H4159.8°56.9°
O3C3C4H4260.5°63.3°
C3O3C3OH8180.0°60.0°
C3O3C3OH960.0°180.0°
C3O3C3OH1060.0°60.0°
O3C3C2H262.7°56.9°
C2C3O3C3O100.1°150.5°
C3C2O2C1123.0°119.6°
C3C2O2H2118.9°120.2°
C3C2C1H2116.7°119.9°
C3C2O2C2O102.9°150.0°
C2C3C4H41177.2°62.9°
C2C3C4H4262.5°176.9°
C3C2C1H1148.1°177.6°
C3C2C1O1120.0°62.4°
C3OO3C3H319.6°30.2°
O3C3OH8H9120.0°120.0°
O3C3OH8H10120.0°120.1°
O3C3OH9H10120.0°120.0°
O2C2C1H2119.5°120.2°
O2C2C3H363.4°56.9°
C2O2C2OH12180.0°180.0°
C2O2C2OH1360.0°60.0°
C2O2C2OH1460.0°60.0°
O2C2C1H188.2°62.5°
O2C2C1O13.8°57.5°
C1C2O2C2O134.1°90.3°
C1C2C3H359.2°63.0°
C2C1H1O1110.2°120.0°
C2C1O1HO15.6°180.0°
C2OO2C2H215.9°29.9°
O2C2OH12H13120.0°120.1°
O2C2OH12H14120.0°120.0°
O2C2OH13H14120.0°120.0°
H41C4C5H557.8°177.7°
H41C4C3H360.2°177.1°
H42C4C5H5178.1°57.6°
H42C4C3H3179.5°56.9°
H5C5C6H6161.5°180.0°
H5C5C6H6258.5°59.9°
H5C5C6H63178.5°60.0°
H61C6H62H63120.0°120.1°
H3C3C2H2176.1°177.1°
H8C3OH9H10120.0°120.0°
H2C2C1H131.4°57.7°
H2C2C1O1123.3°177.7°
H12C2OH13H14120.0°119.9°
H1C1O1HO186.3°60.0°

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PDB entries from 2024-07-10

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