RUZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.47Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.52Å | |
| CB | OG | sing | 1.43Å | 1.43Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| C | N3S | sing | 1.35Å | 1.36Å | |
| N3S | S | sing | 1.66Å | 1.59Å | |
| S | O2S | doub | 1.42Å | 1.42Å | |
| S | O1S | doub | 1.42Å | 1.42Å | |
| S | O5' | sing | 1.52Å | 1.60Å | |
| C5' | O5' | sing | 1.43Å | 1.46Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C4' | C3' | sing | 1.55Å | 1.53Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| O3' | C3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.55Å | 1.54Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| N6 | C6 | sing | 1.40Å | 1.39Å | |
| C2' | C1' | sing | 1.54Å | 1.54Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C1' | N7 | sing | 1.46Å | 1.46Å | |
| C6 | C1 | doub | 1.38Å | 1.40Å | Aromatic |
| C6 | C5 | sing | 1.39Å | 1.44Å | Aromatic |
| C1 | C2 | sing | 1.39Å | 1.39Å | Aromatic |
| N7 | C5 | sing | 1.38Å | 1.38Å | Aromatic |
| N7 | C8 | sing | 1.36Å | 1.37Å | Aromatic |
| C5 | C4 | doub | 1.40Å | 1.41Å | Aromatic |
| C8 | N9 | doub | 1.30Å | 1.31Å | Aromatic |
| C2 | C2M | sing | 1.51Å | 1.50Å | |
| C2 | C3 | doub | 1.36Å | 1.39Å | Aromatic |
| C4 | C3 | sing | 1.40Å | 1.39Å | Aromatic |
| C4 | N9 | sing | 1.36Å | 1.39Å | Aromatic |
| C2M | O2M | sing | 1.43Å | 1.41Å | |
| C1 | H1 | sing | 1.08Å | 1.08Å | |
| C3 | H2 | sing | 1.08Å | 1.08Å | |
| C8 | H3 | sing | 1.08Å | 1.08Å | |
| N | H4 | sing | 1.01Å | 1.00Å | |
| N | H5 | sing | 1.01Å | 1.00Å | |
| CA | H7 | sing | 1.09Å | 1.10Å | |
| CB | H8 | sing | 1.09Å | 1.10Å | |
| CB | H9 | sing | 1.09Å | 1.10Å | |
| OG | H10 | sing | 0.97Å | 0.95Å | |
| N3S | H11 | sing | 0.97Å | 1.00Å | |
| C5' | H12 | sing | 1.09Å | 1.10Å | |
| C5' | H13 | sing | 1.09Å | 1.10Å | |
| C4' | H14 | sing | 1.09Å | 1.10Å | |
| C1' | H15 | sing | 1.09Å | 1.10Å | |
| C2' | H16 | sing | 1.09Å | 1.10Å | |
| O2' | H17 | sing | 0.97Å | 0.95Å | |
| C3' | H18 | sing | 1.09Å | 1.10Å | |
| O3' | H19 | sing | 0.97Å | 0.95Å | |
| N6 | H20 | sing | 0.97Å | 1.00Å | |
| N6 | H21 | sing | 0.97Å | 1.00Å | |
| C2M | H22 | sing | 1.09Å | 1.10Å | |
| C2M | H23 | sing | 1.09Å | 1.10Å | |
| O2M | H24 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N | CA | CB | 109.1° | 109.5° |
| N | CA | C | 111.0° | 109.5° |
| CA | N | H4 | 109.5° | 111.0° |
| CA | N | H5 | 109.4° | 111.0° |
| N | CA | H7 | 109.2° | 109.4° |
| CB | CA | C | 110.2° | 109.5° |
| CA | CB | OG | 112.3° | 109.5° |
| CB | CA | H7 | 108.5° | 109.5° |
| CA | CB | H8 | 108.8° | 109.4° |
| CA | CB | H9 | 108.8° | 109.5° |
| CA | C | O | 121.0° | 120.0° |
| CA | C | N3S | 116.9° | 120.0° |
| C | CA | H7 | 108.7° | 109.5° |
| OG | CB | H8 | 108.8° | 109.5° |
| OG | CB | H9 | 108.8° | 109.5° |
| CB | OG | H10 | 109.5° | 114.0° |
| O | C | N3S | 122.1° | 120.0° |
| C | N3S | S | 125.3° | 120.0° |
| C | N3S | H11 | 117.4° | 120.0° |
| N3S | S | O2S | 109.6° | 106.4° |
| N3S | S | O1S | 107.8° | 106.4° |
| N3S | S | O5' | 105.5° | 107.2° |
| S | N3S | H11 | 117.3° | 120.0° |
| O2S | S | O1S | 120.9° | 123.2° |
| O2S | S | O5' | 102.6° | 106.4° |
| O1S | S | O5' | 109.5° | 106.4° |
| S | O5' | C5' | 118.6° | 114.0° |
| O5' | C5' | C4' | 107.6° | 109.4° |
| O5' | C5' | H12 | 110.0° | 109.5° |
| O5' | C5' | H13 | 109.9° | 109.5° |
| C5' | C4' | C3' | 115.4° | 110.3° |
| C5' | C4' | O4' | 110.7° | 110.4° |
| C4' | C5' | H12 | 109.9° | 109.5° |
| C4' | C5' | H13 | 109.9° | 109.5° |
| C5' | C4' | H14 | 108.7° | 110.3° |
| C3' | C4' | O4' | 103.8° | 104.8° |
| C4' | C3' | O3' | 111.1° | 110.5° |
| C4' | C3' | C2' | 103.5° | 104.0° |
| C3' | C4' | H14 | 108.4° | 110.4° |
| C4' | C3' | H18 | 109.3° | 110.5° |
| C4' | O4' | C1' | 104.9° | 105.3° |
| O4' | C4' | H14 | 109.6° | 110.5° |
| O3' | C3' | C2' | 112.6° | 110.5° |
| O3' | C3' | H18 | 110.9° | 110.5° |
| C3' | O3' | H19 | 109.5° | 114.0° |
| C3' | C2' | C1' | 103.1° | 104.1° |
| C3' | C2' | O2' | 110.7° | 110.5° |
| C3' | C2' | H16 | 110.7° | 110.7° |
| C2' | C3' | H18 | 109.1° | 110.5° |
| O4' | C1' | C2' | 106.9° | 104.8° |
| O4' | C1' | N7 | 110.2° | 110.4° |
| O4' | C1' | H15 | 108.6° | 110.3° |
| N6 | C6 | C1 | 117.9° | 120.2° |
| N6 | C6 | C5 | 124.0° | 120.2° |
| C6 | N6 | H20 | 109.5° | 120.0° |
| C6 | N6 | H21 | 109.5° | 120.0° |
| C1' | C2' | O2' | 108.4° | 110.5° |
| C2' | C1' | N7 | 116.1° | 110.4° |
| C2' | C1' | H15 | 107.0° | 110.5° |
| C1' | C2' | H16 | 110.8° | 110.5° |
| O2' | C2' | H16 | 112.6° | 110.5° |
| C2' | O2' | H17 | 109.5° | 114.0° |
| C1' | N7 | C5 | 129.5° | 126.4° |
| C1' | N7 | C8 | 124.6° | 126.3° |
| N7 | C1' | H15 | 107.9° | 110.4° |
| C1 | C6 | C5 | 118.0° | 119.6° |
| C6 | C1 | C2 | 122.0° | 120.4° |
| C6 | C1 | H1 | 119.0° | 119.8° |
| C6 | C5 | N7 | 135.4° | 134.1° |
| C6 | C5 | C4 | 119.3° | 119.8° |
| C1 | C2 | C2M | 120.4° | 119.6° |
| C1 | C2 | C3 | 119.6° | 120.7° |
| C2 | C1 | H1 | 119.0° | 119.8° |
| C5 | N7 | C8 | 105.8° | 107.3° |
| N7 | C5 | C4 | 105.3° | 106.1° |
| N7 | C8 | N9 | 114.4° | 110.0° |
| N7 | C8 | H3 | 122.8° | 125.0° |
| C5 | C4 | C3 | 120.6° | 119.5° |
| C5 | C4 | N9 | 110.1° | 106.9° |
| C8 | N9 | C4 | 104.3° | 109.7° |
| N9 | C8 | H3 | 122.8° | 125.0° |
| C2M | C2 | C3 | 119.9° | 119.6° |
| C2 | C2M | O2M | 109.9° | 109.5° |
| C2 | C2M | H22 | 109.4° | 109.5° |
| C2 | C2M | H23 | 109.4° | 109.5° |
| C2 | C3 | C4 | 120.5° | 120.0° |
| C2 | C3 | H2 | 119.7° | 120.0° |
| C3 | C4 | N9 | 129.3° | 133.6° |
| C4 | C3 | H2 | 119.8° | 120.0° |
| O2M | C2M | H22 | 109.3° | 109.5° |
| O2M | C2M | H23 | 109.4° | 109.4° |
| C2M | O2M | H24 | 109.5° | 114.0° |
| H4 | N | H5 | 109.5° | 111.0° |
| H8 | CB | H9 | 109.5° | 109.5° |
| H12 | C5' | H13 | 109.5° | 109.5° |
| H20 | N6 | H21 | 109.5° | 120.0° |
| H22 | C2M | H23 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N | CA | CB | C | 122.1° | 120.0° |
| N | CA | CB | H7 | 119.0° | 120.0° |
| N | CA | C | H7 | 120.2° | 120.0° |
| N | CA | CB | OG | 70.7° | 65.0° |
| N | CA | C | O | 2.7° | 20.0° |
| N | CA | C | N3S | 177.1° | 160.0° |
| CA | N | H4 | H5 | 120.0° | 123.9° |
| N | CA | CB | H8 | 168.9° | 55.0° |
| N | CA | CB | H9 | 49.7° | 175.0° |
| CB | CA | C | H7 | 118.8° | 120.0° |
| CA | CB | OG | H8 | 120.4° | 120.0° |
| CA | CB | OG | H9 | 120.4° | 120.0° |
| CB | CA | C | O | 118.3° | 100.1° |
| CB | CA | C | N3S | 61.9° | 80.0° |
| CB | CA | N | H4 | 180.0° | 60.0° |
| CB | CA | N | H5 | 60.0° | 63.9° |
| CA | CB | H8 | H9 | 118.7° | 120.0° |
| CA | CB | OG | H10 | 180.0° | 179.9° |
| C | CA | CB | OG | 51.4° | 175.0° |
| CA | C | O | N3S | 179.8° | 179.9° |
| CA | C | N3S | S | 177.5° | 180.0° |
| C | CA | N | H4 | 58.4° | 60.0° |
| C | CA | N | H5 | 61.6° | 176.1° |
| C | CA | CB | H8 | 69.0° | 65.0° |
| C | CA | CB | H9 | 171.8° | 55.0° |
| CA | C | N3S | H11 | 2.5° | 0.1° |
| OG | CB | CA | H7 | 170.3° | 55.0° |
| OG | CB | H8 | H9 | 118.7° | 120.0° |
| O | C | N3S | S | 2.7° | 0.1° |
| O | C | CA | H7 | 122.8° | 139.9° |
| O | C | N3S | H11 | 177.2° | 180.0° |
| C | N3S | S | H11 | 180.0° | 179.9° |
| C | N3S | S | O2S | 51.1° | 48.5° |
| C | N3S | S | O1S | 175.5° | 178.6° |
| C | N3S | S | O5' | 58.6° | 65.0° |
| N3S | C | CA | H7 | 57.0° | 40.0° |
| N3S | S | O2S | O1S | 126.2° | 123.0° |
| N3S | S | O2S | O5' | 111.7° | 114.1° |
| N3S | S | O1S | O5' | 114.2° | 114.1° |
| N3S | S | O5' | C5' | 46.3° | 75.0° |
| O2S | S | O1S | O5' | 118.8° | 122.9° |
| O2S | S | O5' | C5' | 160.9° | 171.5° |
| O2S | S | N3S | H11 | 128.9° | 131.4° |
| O1S | S | O5' | C5' | 69.4° | 38.5° |
| O1S | S | N3S | H11 | 4.5° | 1.5° |
| S | O5' | C5' | C4' | 131.5° | 180.0° |
| O5' | S | N3S | H11 | 121.4° | 115.1° |
| S | O5' | C5' | H12 | 11.7° | 60.0° |
| S | O5' | C5' | H13 | 108.9° | 60.0° |
| O5' | C5' | C4' | H12 | 119.7° | 120.0° |
| O5' | C5' | C4' | H13 | 119.7° | 120.0° |
| O5' | C5' | C4' | C3' | 60.3° | 175.0° |
| O5' | C5' | C4' | O4' | 57.2° | 69.6° |
| O5' | C5' | H12 | H13 | 120.9° | 120.0° |
| O5' | C5' | C4' | H14 | 177.6° | 52.8° |
| C5' | C4' | C3' | O4' | 121.3° | 118.8° |
| C5' | C4' | C3' | H14 | 122.2° | 122.2° |
| C5' | C4' | O4' | H14 | 119.9° | 122.3° |
| C5' | C4' | C3' | O3' | 86.1° | 98.5° |
| C5' | C4' | C3' | C2' | 152.9° | 142.8° |
| C5' | C4' | O4' | C1' | 167.8° | 159.3° |
| C4' | C5' | H12 | H13 | 120.9° | 120.0° |
| C5' | C4' | C3' | H18 | 36.7° | 24.2° |
| C3' | C4' | O4' | H14 | 115.7° | 118.9° |
| C4' | C3' | O3' | C2' | 115.6° | 114.6° |
| C4' | C3' | O3' | H18 | 121.8° | 122.7° |
| C4' | C3' | C2' | H18 | 116.3° | 118.7° |
| C3' | C4' | O4' | C1' | 43.4° | 40.5° |
| C4' | C3' | C2' | C1' | 9.4° | 0.0° |
| C4' | C3' | C2' | O2' | 106.4° | 118.6° |
| C3' | C4' | C5' | H12 | 59.4° | 65.0° |
| C3' | C4' | C5' | H13 | 180.0° | 55.0° |
| C4' | C3' | C2' | H16 | 127.9° | 118.7° |
| C4' | C3' | O3' | H19 | 180.0° | 179.9° |
| O4' | C4' | C3' | O3' | 152.7° | 142.6° |
| O4' | C4' | C3' | C2' | 31.6° | 24.0° |
| C4' | O4' | C1' | C2' | 37.6° | 40.5° |
| C4' | O4' | C1' | N7 | 164.6° | 159.4° |
| O4' | C4' | C5' | H12 | 176.9° | 50.3° |
| O4' | C4' | C5' | H13 | 62.5° | 170.4° |
| C4' | O4' | C1' | H15 | 77.5° | 78.4° |
| O4' | C4' | C3' | H18 | 84.6° | 94.6° |
| O3' | C3' | C2' | H18 | 123.6° | 122.7° |
| O3' | C3' | C2' | C1' | 129.4° | 118.7° |
| O3' | C3' | C2' | O2' | 13.7° | 0.0° |
| O3' | C3' | C4' | H14 | 36.1° | 23.6° |
| O3' | C3' | C2' | H16 | 112.0° | 122.7° |
| C3' | C2' | C1' | O4' | 16.4° | 24.0° |
| C3' | C2' | C1' | O2' | 117.4° | 118.7° |
| C3' | C2' | C1' | H16 | 118.5° | 118.8° |
| C3' | C2' | O2' | H16 | 124.6° | 122.8° |
| C3' | C2' | C1' | N7 | 139.8° | 142.8° |
| C2' | C3' | C4' | H14 | 85.0° | 95.0° |
| C3' | C2' | C1' | H15 | 99.7° | 94.8° |
| C3' | C2' | O2' | H17 | 180.0° | 65.3° |
| C2' | C3' | O3' | H19 | 64.5° | 65.3° |
| O4' | C1' | C2' | N7 | 123.4° | 118.8° |
| O4' | C1' | C2' | H15 | 116.1° | 118.8° |
| O4' | C1' | C2' | O2' | 133.8° | 142.6° |
| O4' | C1' | N7 | H15 | 118.4° | 122.2° |
| O4' | C1' | N7 | C5 | 59.5° | 154.6° |
| O4' | C1' | N7 | C8 | 124.0° | 25.3° |
| C1' | O4' | C4' | H14 | 72.3° | 78.4° |
| O4' | C1' | C2' | H16 | 102.1° | 94.8° |
| N6 | C6 | C1 | C5 | 177.1° | 179.5° |
| N6 | C6 | C1 | C2 | 176.2° | 180.0° |
| N6 | C6 | C5 | N7 | 3.2° | 0.3° |
| N6 | C6 | C5 | C4 | 175.2° | 180.0° |
| N6 | C6 | C1 | H1 | 3.7° | 0.3° |
| C6 | N6 | H20 | H21 | 120.0° | 180.0° |
| C1' | C2' | O2' | H16 | 123.0° | 122.5° |
| C2' | C1' | N7 | H15 | 120.0° | 122.4° |
| C2' | C1' | N7 | C5 | 62.1° | 90.0° |
| C2' | C1' | N7 | C8 | 114.3° | 90.1° |
| C1' | C2' | O2' | H17 | 67.5° | 180.0° |
| C1' | C2' | C3' | H18 | 107.0° | 118.7° |
| O2' | C2' | C1' | N7 | 102.8° | 98.5° |
| O2' | C2' | C1' | H15 | 17.7° | 23.8° |
| O2' | C2' | C3' | H18 | 137.2° | 122.7° |
| C1' | N7 | C5 | C6 | 5.8° | 0.2° |
| C1' | N7 | C5 | C8 | 176.9° | 179.9° |
| C1' | N7 | C5 | C4 | 175.6° | 180.0° |
| C1' | N7 | C8 | N9 | 176.0° | 180.0° |
| C1' | N7 | C8 | H3 | 4.0° | 0.0° |
| N7 | C1' | C2' | H16 | 21.3° | 24.0° |
| C6 | C1 | C2 | H1 | 180.0° | 179.7° |
| C1 | C6 | C5 | N7 | 179.9° | 179.8° |
| C1 | C6 | C5 | C4 | 1.7° | 0.5° |
| C6 | C1 | C2 | C2M | 178.9° | 179.8° |
| C6 | C1 | C2 | C3 | 0.3° | 0.3° |
| C1 | C6 | N6 | H20 | 180.0° | 7.0° |
| C1 | C6 | N6 | H21 | 60.0° | 172.9° |
| C5 | C6 | C1 | C2 | 0.9° | 0.5° |
| C6 | C5 | N7 | C4 | 178.6° | 179.8° |
| C6 | C5 | N7 | C8 | 177.3° | 179.7° |
| C6 | C5 | C4 | C3 | 1.4° | 0.2° |
| C6 | C5 | C4 | N9 | 177.8° | 179.8° |
| C5 | C6 | C1 | H1 | 179.1° | 179.8° |
| C5 | C6 | N6 | H20 | 3.1° | 173.5° |
| C5 | C6 | N6 | H21 | 123.1° | 6.6° |
| C1 | C2 | C2M | C3 | 178.6° | 180.0° |
| C1 | C2 | C3 | C4 | 0.6° | 0.0° |
| C1 | C2 | C2M | O2M | 119.4° | 90.0° |
| C1 | C2 | C3 | H2 | 179.4° | 180.0° |
| C1 | C2 | C2M | H22 | 0.6° | 150.0° |
| C1 | C2 | C2M | H23 | 120.5° | 30.0° |
| C5 | N7 | C8 | N9 | 1.2° | 0.1° |
| N7 | C5 | C4 | C3 | 179.7° | 180.0° |
| N7 | C5 | C4 | N9 | 1.1° | 0.0° |
| C5 | N7 | C8 | H3 | 178.8° | 180.0° |
| C5 | N7 | C1' | H15 | 177.9° | 32.4° |
| C8 | N7 | C5 | C4 | 1.3° | 0.1° |
| N7 | C8 | N9 | H3 | 180.0° | 180.0° |
| N7 | C8 | N9 | C4 | 0.5° | 0.0° |
| C8 | N7 | C1' | H15 | 5.7° | 147.5° |
| C5 | C4 | N9 | C8 | 0.4° | 0.0° |
| C5 | C4 | C3 | C2 | 0.2° | 0.0° |
| C5 | C4 | C3 | N9 | 179.0° | 180.0° |
| C5 | C4 | C3 | H2 | 179.8° | 180.0° |
| C8 | N9 | C4 | C3 | 179.5° | 180.0° |
| C2M | C2 | C3 | C4 | 179.3° | 180.0° |
| C2 | C2M | O2M | H22 | 120.1° | 120.1° |
| C2 | C2M | O2M | H23 | 120.1° | 120.0° |
| C2M | C2 | C1 | H1 | 1.1° | 0.0° |
| C2M | C2 | C3 | H2 | 0.7° | 0.0° |
| C2 | C2M | H22 | H23 | 119.8° | 120.0° |
| C2 | C2M | O2M | H24 | 180.0° | 179.9° |
| C2 | C3 | C4 | H2 | 180.0° | 180.0° |
| C2 | C3 | C4 | N9 | 178.8° | 180.0° |
| C3 | C2 | C2M | O2M | 59.2° | 90.0° |
| C3 | C2 | C1 | H1 | 179.7° | 180.0° |
| C3 | C2 | C2M | H22 | 179.2° | 30.0° |
| C3 | C2 | C2M | H23 | 60.9° | 150.0° |
| N9 | C4 | C3 | H2 | 1.2° | 0.0° |
| C4 | N9 | C8 | H3 | 179.5° | 180.0° |
| O2M | C2M | H22 | H23 | 119.8° | 119.9° |
| H4 | N | CA | H7 | 61.5° | 180.0° |
| H5 | N | CA | H7 | 178.5° | 56.1° |
| H7 | CA | CB | H8 | 49.9° | 175.0° |
| H7 | CA | CB | H9 | 69.3° | 65.1° |
| H8 | CB | OG | H10 | 59.6° | 60.0° |
| H9 | CB | OG | H10 | 59.6° | 60.0° |
| H12 | C5' | C4' | H14 | 62.6° | 172.8° |
| H13 | C5' | C4' | H14 | 58.0° | 67.2° |
| H14 | C4' | C3' | H18 | 158.9° | 146.4° |
| H15 | C1' | C2' | H16 | 141.8° | 146.3° |
| H16 | C2' | O2' | H17 | 55.4° | 57.5° |
| H16 | C2' | C3' | H18 | 11.6° | 0.0° |
| H18 | C3' | O3' | H19 | 58.2° | 57.3° |
| H22 | C2M | O2M | H24 | 59.9° | 59.9° |
| H23 | C2M | O2M | H24 | 59.9° | 60.1° |
