RTP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| PG | O1G | doub | 1.48Å | 1.49Å | |
| PG | O2G | sing | 1.61Å | 1.49Å | |
| PG | O3G | sing | 1.61Å | 1.49Å | |
| PG | O3B | sing | 1.61Å | 1.62Å | |
| O2G | HOG2 | sing | 0.97Å | 0.95Å | |
| O3G | HOG3 | sing | 0.97Å | 0.95Å | |
| O3B | PB | sing | 1.61Å | 1.61Å | |
| PB | O1B | doub | 1.48Å | 1.49Å | |
| PB | O2B | sing | 1.61Å | 1.48Å | |
| PB | O3A | sing | 1.61Å | 1.60Å | |
| O2B | HOB2 | sing | 0.97Å | 0.95Å | |
| O3A | PA | sing | 1.61Å | 1.60Å | |
| PA | O1A | doub | 1.48Å | 1.49Å | |
| PA | O2A | sing | 1.61Å | 1.48Å | |
| PA | O5' | sing | 1.61Å | 1.59Å | |
| O2A | HOA2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | H5'1 | sing | 1.09Å | 1.11Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.55Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.12Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C1' | N1 | sing | 1.47Å | 1.46Å | |
| C1' | C2' | sing | 1.54Å | 1.53Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| N1 | N2 | sing | 1.29Å | 1.36Å | Aromatic |
| N1 | C5 | sing | 1.35Å | 1.37Å | Aromatic |
| N2 | C3 | doub | 1.32Å | 1.39Å | Aromatic |
| N3 | C6 | sing | 1.35Å | 1.40Å | |
| N3 | HN31 | sing | 0.97Å | 1.02Å | |
| N3 | HN32 | sing | 0.97Å | 1.02Å | |
| C6 | O3 | doub | 1.22Å | 1.24Å | |
| C6 | C3 | sing | 1.48Å | 1.41Å | |
| C3 | N4 | sing | 1.34Å | 1.39Å | Aromatic |
| N4 | C5 | doub | 1.31Å | 1.30Å | Aromatic |
| C5 | H5 | sing | 1.08Å | 1.10Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | C3' | sing | 1.55Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.11Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | H3' | sing | 1.09Å | 1.11Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O2G | 117.5° | 109.5° |
| O1G | PG | O3G | 103.6° | 109.5° |
| O1G | PG | O3B | 106.3° | 109.5° |
| O2G | PG | O3G | 117.9° | 109.5° |
| O2G | PG | O3B | 105.1° | 109.5° |
| PG | O2G | HOG2 | 117.5° | 106.8° |
| O3G | PG | O3B | 105.3° | 109.5° |
| PG | O3G | HOG3 | 103.6° | 106.8° |
| PG | O3B | PB | 144.1° | 106.8° |
| O3B | PB | O1B | 109.8° | 109.5° |
| O3B | PB | O2B | 108.1° | 109.5° |
| O3B | PB | O3A | 106.4° | 109.4° |
| O1B | PB | O2B | 119.0° | 109.5° |
| O1B | PB | O3A | 106.6° | 109.5° |
| O2B | PB | O3A | 106.2° | 109.5° |
| PB | O2B | HOB2 | 108.1° | 106.8° |
| PB | O3A | PA | 133.4° | 106.8° |
| O3A | PA | O1A | 109.8° | 109.5° |
| O3A | PA | O2A | 108.9° | 109.5° |
| O3A | PA | O5' | 99.3° | 109.5° |
| O1A | PA | O2A | 119.9° | 109.5° |
| O1A | PA | O5' | 108.8° | 109.5° |
| O2A | PA | O5' | 108.2° | 109.5° |
| PA | O2A | HOA2 | 108.9° | 106.8° |
| PA | O5' | C5' | 120.1° | 106.8° |
| O5' | C5' | C4' | 110.0° | 109.4° |
| O5' | C5' | H5'1 | 112.0° | 109.5° |
| O5' | C5' | H5'2 | 112.0° | 109.5° |
| C4' | C5' | H5'1 | 112.0° | 109.4° |
| C4' | C5' | H5'2 | 112.0° | 109.5° |
| C5' | C4' | O4' | 109.7° | 110.4° |
| C5' | C4' | C3' | 115.5° | 110.4° |
| C5' | C4' | H4' | 103.5° | 110.3° |
| H5'1 | C5' | H5'2 | 98.4° | 109.5° |
| O4' | C4' | C3' | 103.5° | 104.8° |
| O4' | C4' | H4' | 115.5° | 110.4° |
| C4' | O4' | C1' | 110.2° | 105.3° |
| C3' | C4' | H4' | 109.7° | 110.4° |
| C4' | C3' | C2' | 105.2° | 104.1° |
| C4' | C3' | O3' | 111.6° | 110.5° |
| C4' | C3' | H3' | 111.9° | 110.5° |
| O4' | C1' | N1 | 107.8° | 110.4° |
| O4' | C1' | C2' | 107.8° | 104.9° |
| O4' | C1' | H1' | 112.7° | 110.4° |
| N1 | C1' | C2' | 112.5° | 110.4° |
| N1 | C1' | H1' | 108.1° | 110.3° |
| C1' | N1 | N2 | 126.1° | 125.7° |
| C1' | N1 | C5 | 127.4° | 125.7° |
| C2' | C1' | H1' | 108.1° | 110.4° |
| C1' | C2' | O2' | 109.1° | 110.8° |
| C1' | C2' | C3' | 99.7° | 104.0° |
| C1' | C2' | H2' | 117.0° | 110.4° |
| N2 | N1 | C5 | 106.5° | 108.5° |
| N1 | N2 | C3 | 106.0° | 108.7° |
| N1 | C5 | N4 | 113.1° | 107.6° |
| N1 | C5 | H5 | 125.6° | 126.2° |
| N2 | C3 | C6 | 125.1° | 126.0° |
| N2 | C3 | N4 | 109.5° | 107.9° |
| C6 | N3 | HN31 | 120.1° | 120.0° |
| C6 | N3 | HN32 | 111.7° | 120.0° |
| N3 | C6 | O3 | 120.1° | 120.0° |
| N3 | C6 | C3 | 111.7° | 120.0° |
| HN31 | N3 | HN32 | 128.2° | 120.0° |
| O3 | C6 | C3 | 128.2° | 120.0° |
| C6 | C3 | N4 | 125.4° | 126.1° |
| C3 | N4 | C5 | 104.9° | 107.3° |
| N4 | C5 | H5 | 121.2° | 126.2° |
| O2' | C2' | C3' | 112.8° | 110.5° |
| O2' | C2' | H2' | 104.9° | 110.4° |
| C2' | O2' | HO2' | 109.1° | 106.8° |
| C3' | C2' | H2' | 113.6° | 110.5° |
| C2' | C3' | O3' | 112.4° | 110.5° |
| C2' | C3' | H3' | 111.1° | 110.6° |
| O3' | C3' | H3' | 104.7° | 110.5° |
| C3' | O3' | HO3' | 111.6° | 106.8° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O2G | O3G | 125.2° | 120.0° |
| O1G | PG | O2G | O3B | 118.0° | 120.0° |
| O1G | PG | O3G | O3B | 111.5° | 120.0° |
| O1G | PG | O2G | HOG2 | 180.0° | 60.0° |
| O1G | PG | O3G | HOG3 | 180.0° | 180.0° |
| O1G | PG | O3B | PB | 130.2° | 45.0° |
| O2G | PG | O3G | O3B | 116.8° | 120.0° |
| O2G | PG | O3G | HOG3 | 48.2° | 60.0° |
| O2G | PG | O3B | PB | 104.5° | 165.0° |
| O3G | PG | O2G | HOG2 | 54.9° | 60.0° |
| O3G | PG | O3B | PB | 20.7° | 75.0° |
| O3B | PG | O2G | HOG2 | 62.0° | 180.0° |
| O3B | PG | O3G | HOG3 | 68.5° | 60.0° |
| PG | O3B | PB | O1B | 42.0° | 40.1° |
| PG | O3B | PB | O2B | 173.3° | 80.0° |
| PG | O3B | PB | O3A | 73.0° | 160.0° |
| O3B | PB | O1B | O2B | 125.2° | 120.1° |
| O3B | PB | O1B | O3A | 114.9° | 119.9° |
| O3B | PB | O2B | O3A | 113.8° | 120.0° |
| O3B | PB | O2B | HOB2 | 180.0° | 59.9° |
| O3B | PB | O3A | PA | 98.8° | 165.0° |
| O1B | PB | O2B | O3A | 120.1° | 120.0° |
| O1B | PB | O2B | HOB2 | 54.0° | 180.0° |
| O1B | PB | O3A | PA | 18.3° | 45.1° |
| O2B | PB | O3A | PA | 146.2° | 75.0° |
| O3A | PB | O2B | HOB2 | 66.1° | 60.0° |
| PB | O3A | PA | O1A | 103.2° | 45.0° |
| PB | O3A | PA | O2A | 29.8° | 75.0° |
| PB | O3A | PA | O5' | 142.8° | 165.0° |
| O3A | PA | O1A | O2A | 127.1° | 120.0° |
| O3A | PA | O1A | O5' | 107.8° | 120.0° |
| O3A | PA | O2A | O5' | 107.0° | 120.0° |
| O3A | PA | O2A | HOA2 | 180.0° | 60.0° |
| O3A | PA | O5' | C5' | 65.7° | 175.0° |
| O1A | PA | O2A | O5' | 125.5° | 120.0° |
| O1A | PA | O2A | HOA2 | 52.5° | 180.0° |
| O1A | PA | O5' | C5' | 179.5° | 55.0° |
| O2A | PA | O5' | C5' | 47.8° | 65.0° |
| O5' | PA | O2A | HOA2 | 73.0° | 60.0° |
| PA | O5' | C5' | C4' | 124.7° | 180.0° |
| PA | O5' | C5' | H5'1 | 110.0° | 60.1° |
| PA | O5' | C5' | H5'2 | 0.6° | 60.0° |
| O5' | C5' | C4' | H5'1 | 125.3° | 120.0° |
| O5' | C5' | C4' | H5'2 | 125.3° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 117.9° | 120.1° |
| O5' | C5' | C4' | O4' | 72.1° | 66.5° |
| O5' | C5' | C4' | C3' | 44.3° | 178.1° |
| O5' | C5' | C4' | H4' | 164.1° | 55.8° |
| C4' | C5' | H5'1 | H5'2 | 117.9° | 120.0° |
| C5' | C4' | O4' | C3' | 123.7° | 118.9° |
| C5' | C4' | O4' | H4' | 116.4° | 122.2° |
| C5' | C4' | C3' | H4' | 116.4° | 122.3° |
| C5' | C4' | O4' | C1' | 138.0° | 159.5° |
| C5' | C4' | C3' | C2' | 152.2° | 143.0° |
| C5' | C4' | C3' | O3' | 85.6° | 98.4° |
| C5' | C4' | C3' | H3' | 31.4° | 24.2° |
| H5'1 | C5' | C4' | O4' | 53.2° | 173.5° |
| H5'1 | C5' | C4' | C3' | 169.6° | 58.1° |
| H5'1 | C5' | C4' | H4' | 70.6° | 64.2° |
| H5'2 | C5' | C4' | O4' | 162.6° | 53.5° |
| H5'2 | C5' | C4' | C3' | 81.0° | 61.9° |
| H5'2 | C5' | C4' | H4' | 38.9° | 175.8° |
| O4' | C4' | C3' | H4' | 123.8° | 118.9° |
| C4' | O4' | C1' | N1 | 112.5° | 159.4° |
| C4' | O4' | C1' | C2' | 9.1° | 40.5° |
| C4' | O4' | C1' | H1' | 128.3° | 78.4° |
| O4' | C4' | C3' | C2' | 32.4° | 24.1° |
| O4' | C4' | C3' | O3' | 154.6° | 142.8° |
| O4' | C4' | C3' | H3' | 88.4° | 94.7° |
| C3' | C4' | O4' | C1' | 14.3° | 40.5° |
| C4' | C3' | C2' | C1' | 36.5° | 0.1° |
| C4' | C3' | C2' | O2' | 79.1° | 118.8° |
| C4' | C3' | C2' | O3' | 121.7° | 118.7° |
| C4' | C3' | C2' | H3' | 121.3° | 118.7° |
| C4' | C3' | C2' | H2' | 161.7° | 118.7° |
| C4' | C3' | O3' | H3' | 121.3° | 122.6° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| H4' | C4' | O4' | C1' | 105.6° | 78.3° |
| H4' | C4' | C3' | C2' | 91.4° | 94.8° |
| H4' | C4' | C3' | O3' | 30.8° | 23.9° |
| H4' | C4' | C3' | H3' | 147.8° | 146.5° |
| O4' | C1' | N1 | C2' | 118.7° | 115.5° |
| O4' | C1' | N1 | H1' | 122.1° | 122.3° |
| O4' | C1' | C2' | H1' | 122.1° | 118.9° |
| O4' | C1' | N1 | N2 | 137.1° | 62.3° |
| O4' | C1' | N1 | C5 | 42.9° | 118.0° |
| O4' | C1' | C2' | O2' | 90.2° | 142.6° |
| O4' | C1' | C2' | C3' | 28.1° | 23.9° |
| O4' | C1' | C2' | H2' | 151.0° | 94.7° |
| N1 | C1' | C2' | H1' | 119.2° | 122.2° |
| C1' | N1 | N2 | C5 | 180.0° | 179.8° |
| C1' | N1 | N2 | C3 | 179.8° | 179.8° |
| C1' | N1 | C5 | N4 | 179.9° | 180.0° |
| C1' | N1 | C5 | H5 | 0.0° | 0.0° |
| N1 | C1' | C2' | O2' | 151.1° | 98.5° |
| N1 | C1' | C2' | C3' | 90.5° | 142.7° |
| N1 | C1' | C2' | H2' | 32.3° | 24.2° |
| C2' | C1' | N1 | N2 | 104.2° | 53.1° |
| C2' | C1' | N1 | C5 | 75.8° | 126.6° |
| C1' | C2' | O2' | C3' | 109.8° | 114.7° |
| C1' | C2' | O2' | H2' | 126.1° | 122.7° |
| C1' | C2' | C3' | H2' | 125.2° | 118.5° |
| C1' | C2' | O2' | HO2' | 180.0° | 65.3° |
| C1' | C2' | C3' | O3' | 158.1° | 118.8° |
| C1' | C2' | C3' | H3' | 84.9° | 118.5° |
| H1' | C1' | N1 | N2 | 15.0° | 175.4° |
| H1' | C1' | N1 | C5 | 165.0° | 4.3° |
| H1' | C1' | C2' | O2' | 31.9° | 23.7° |
| H1' | C1' | C2' | C3' | 150.2° | 95.0° |
| H1' | C1' | C2' | H2' | 86.9° | 146.4° |
| N1 | N2 | C3 | C6 | 179.8° | 179.8° |
| N1 | N2 | C3 | N4 | 0.2° | 0.4° |
| N2 | N1 | C5 | N4 | 0.1° | 0.2° |
| N2 | N1 | C5 | H5 | 180.0° | 179.7° |
| C5 | N1 | N2 | C3 | 0.2° | 0.4° |
| N1 | C5 | N4 | C3 | 0.1° | 0.0° |
| N1 | C5 | N4 | H5 | 180.0° | 179.9° |
| N2 | C3 | C6 | N3 | 0.8° | 179.7° |
| N2 | C3 | C6 | O3 | 178.9° | 0.3° |
| N2 | C3 | C6 | N4 | 180.0° | 179.7° |
| N2 | C3 | N4 | C5 | 0.2° | 0.3° |
| C6 | N3 | HN31 | HN32 | 179.7° | 179.7° |
| N3 | C6 | O3 | C3 | 179.7° | 180.0° |
| N3 | C6 | C3 | N4 | 179.1° | 0.0° |
| HN31 | N3 | C6 | O3 | 180.0° | 0.0° |
| HN31 | N3 | C6 | C3 | 0.2° | 180.0° |
| HN32 | N3 | C6 | O3 | 0.3° | 179.7° |
| HN32 | N3 | C6 | C3 | 180.0° | 0.3° |
| O3 | C6 | C3 | N4 | 1.2° | 180.0° |
| C6 | C3 | N4 | C5 | 179.9° | 180.0° |
| C3 | N4 | C5 | H5 | 179.9° | 180.0° |
| O2' | C2' | C3' | H2' | 119.2° | 122.5° |
| O2' | C2' | C3' | O3' | 42.5° | 0.2° |
| O2' | C2' | C3' | H3' | 159.5° | 122.5° |
| C3' | C2' | O2' | HO2' | 70.2° | 180.0° |
| C2' | C3' | O3' | H3' | 120.8° | 122.7° |
| C2' | C3' | O3' | HO3' | 62.1° | 65.4° |
| H2' | C2' | O2' | HO2' | 53.9° | 57.4° |
| H2' | C2' | C3' | O3' | 76.6° | 122.7° |
| H2' | C2' | C3' | H3' | 40.4° | 0.0° |
| H3' | C3' | O3' | HO3' | 58.7° | 57.4° |
