Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

RTO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C07C06sing1.53Å1.53Å
C06C05sing1.53Å1.53Å
O10S08doub1.42Å1.46Å
C12C13doub1.38Å1.38ÅAromatic
C12C11sing1.38Å1.39ÅAromatic
C13C14sing1.40Å1.38ÅAromatic
O19C17doub1.21Å1.26Å
S08C11sing1.76Å1.82Å
S08N04sing1.66Å1.71Å
S08O09doub1.42Å1.46Å
C05N04sing1.47Å1.45Å
C11C16doub1.38Å1.38ÅAromatic
N04C03sing1.46Å1.45Å
C14C17sing1.48Å1.52Å
C14C15doub1.40Å1.39ÅAromatic
C17O18sing1.35Å1.26Å
C03C02sing1.53Å1.52Å
C16C15sing1.38Å1.39ÅAromatic
C02C01sing1.53Å1.53Å
C13H1sing1.08Å1.08Å
C15H2sing1.08Å1.08Å
C01H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C01H5sing1.09Å1.10Å
C02H6sing1.09Å1.10Å
C02H7sing1.09Å1.10Å
C03H8sing1.09Å1.10Å
C03H9sing1.09Å1.10Å
C05H10sing1.09Å1.10Å
C05H11sing1.09Å1.10Å
C06H12sing1.09Å1.10Å
C06H13sing1.09Å1.10Å
C07H14sing1.09Å1.10Å
C07H15sing1.09Å1.10Å
C07H16sing1.09Å1.10Å
C12H17sing1.08Å1.08Å
C16H18sing1.08Å1.08Å
O18H19sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C07C06C05112.0°109.5°
C07C06H12108.8°109.5°
C07C06H13108.9°109.5°
C06C07H14109.5°109.5°
C06C07H15109.5°109.5°
C06C07H16109.5°109.5°
C06C05N04110.3°109.4°
C06C05H10109.3°109.4°
C06C05H11109.2°109.5°
C05C06H12108.8°109.5°
C05C06H13108.8°109.5°
O10S08C11111.1°106.4°
O10S08N04111.4°106.4°
O10S08O09101.3°123.2°
C13C12C11119.9°120.2°
C12C13C14119.8°119.9°
C12C13H1120.1°120.1°
C13C12H17120.1°119.9°
C12C11S08119.7°119.8°
C12C11C16120.2°120.3°
C11C12H17120.0°119.9°
C13C14C17119.9°120.2°
C13C14C15120.3°119.7°
C14C13H1120.1°120.0°
O19C17C14119.9°120.0°
O19C17O18120.2°120.0°
C11S08N04110.3°107.2°
C11S08O09111.3°106.4°
S08C11C16120.0°119.9°
N04S08O09111.2°106.5°
S08N04C05119.7°120.0°
S08N04C03120.1°120.0°
C05N04C03120.2°120.0°
N04C05H10109.2°109.5°
N04C05H11109.3°109.5°
C11C16C15119.8°120.2°
C11C16H18120.1°119.9°
N04C03C02110.4°109.5°
N04C03H8109.2°109.5°
N04C03H9109.3°109.5°
C17C14C15119.8°120.1°
C14C17O18119.9°120.0°
C14C15C16119.9°119.8°
C14C15H2120.0°120.1°
C17O18H19109.5°116.9°
C03C02C01112.1°109.5°
C03C02H6108.8°109.4°
C03C02H7108.8°109.5°
C02C03H8109.3°109.4°
C02C03H9109.2°109.5°
C16C15H2120.0°120.1°
C15C16H18120.1°119.9°
C02C01H3109.5°109.5°
C02C01H4109.5°109.4°
C02C01H5109.5°109.5°
C01C02H6108.8°109.4°
C01C02H7108.8°109.5°
H3C01H4109.5°109.4°
H3C01H5109.5°109.5°
H4C01H5109.5°109.4°
H6C02H7109.5°109.4°
H8C03H9109.5°109.4°
H10C05H11109.5°109.5°
H12C06H13109.5°109.5°
H14C07H15109.5°109.5°
H14C07H16109.4°109.4°
H15C07H16109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C07C06C05H12120.4°120.0°
C07C06C05H13120.4°120.0°
C07C06C05N04174.4°180.0°
C07C06C05H1054.3°60.0°
C07C06C05H1165.5°60.0°
C07C06H12H13118.9°120.0°
C06C07H14H15120.0°120.0°
C06C07H14H16120.0°119.9°
C06C07H15H16120.0°120.0°
C06C05N04S0864.3°95.0°
C06C05N04H10120.1°120.0°
C06C05N04H11120.1°120.0°
C06C05N04C03115.1°85.1°
C06C05H10H11119.6°120.0°
C05C06H12H13118.8°120.0°
C05C06C07H14180.0°60.1°
C05C06C07H1560.0°60.0°
C05C06C07H1660.0°180.0°
O10S08C11C125.8°157.2°
O10S08C11N04124.0°113.5°
O10S08C11O09112.0°132.9°
O10S08N04O09112.2°133.0°
O10S08N04C0587.6°156.4°
O10S08C11C16174.1°23.6°
O10S08N04C0391.8°23.5°
C13C12C11H17180.0°179.9°
C12C13C14H1180.0°179.7°
C13C12C11S08180.0°179.7°
C13C12C11C160.1°0.5°
C12C13C14C17180.0°179.7°
C12C13C14C150.1°0.3°
C11C12C13C140.0°0.1°
C12C11S08C16179.9°179.2°
C12C11S08N04118.2°89.3°
C12C11S08O09117.9°24.3°
C12C11C16C150.1°0.8°
C11C12C13H1180.0°179.8°
C12C11C16H18179.9°179.9°
C13C14C17O1919.5°0.0°
C13C14C17C15179.9°180.0°
C13C14C17O18160.4°180.0°
C13C14C15C160.0°0.0°
C13C14C15H2180.0°180.0°
C14C13C12H17180.0°180.0°
O19C17C14O18180.0°179.9°
O19C17C14C15160.5°180.0°
O19C17O18H190.0°0.0°
C11S08N04O09124.0°113.6°
C11S08N04C0536.3°90.1°
C11S08N04C03144.3°90.0°
S08C11C16C15180.0°180.0°
S08C11C12H170.0°0.2°
S08C11C16H180.0°0.8°
S08N04C05C03179.4°179.9°
N04S08C11C1661.9°90.0°
S08N04C03C0282.8°95.0°
S08N04C03H8157.1°145.0°
S08N04C03H937.4°25.1°
S08N04C05H1055.8°145.0°
S08N04C05H11175.6°24.9°
O09S08N04C05160.3°23.5°
O09S08C11C1662.1°156.5°
O09S08N04C0320.3°156.4°
C05N04C03C0297.8°84.9°
C05N04C03H822.3°35.1°
C05N04C03H9142.0°155.0°
N04C05H10H11119.6°120.0°
N04C05C06H1265.3°60.0°
N04C05C06H1354.0°60.0°
C11C16C15C140.1°0.5°
C11C16C15H18180.0°179.2°
C11C16C15H2179.9°179.4°
C16C11C12H17179.9°179.5°
N04C03C02H8120.1°120.0°
N04C03C02H9120.2°120.1°
N04C03C02C01179.1°180.0°
N04C03C02H658.7°60.0°
N04C03C02H760.6°59.9°
N04C03H8H9119.6°120.0°
C03N04C05H10124.8°34.9°
C03N04C05H115.0°155.0°
C17C14C15C16180.0°180.0°
C17C14C13H10.0°0.0°
C17C14C15H20.0°0.0°
C14C17O18H19180.0°180.0°
C15C14C17O1819.5°0.0°
C14C15C16H2180.0°180.0°
C15C14C13H1179.9°180.0°
C14C15C16H18180.0°179.7°
C03C02C01H6120.4°120.0°
C03C02C01H7120.4°120.1°
C03C02C01H3180.0°59.9°
C03C02C01H460.0°60.0°
C03C02C01H560.0°180.0°
C03C02H6H7118.9°120.0°
C02C03H8H9119.6°120.0°
C02C01H3H4120.0°120.0°
C02C01H3H5120.0°120.1°
C02C01H4H5120.0°120.0°
C01C02H6H7118.8°120.0°
C01C02C03H860.8°60.1°
C01C02C03H958.9°59.9°
H1C13C12H170.0°0.3°
H2C15C16H180.1°0.3°
H3C01H4H5120.0°120.0°
H3C01C02H659.6°60.0°
H3C01C02H759.6°NaN°
H4C01C02H6179.7°NaN°
H4C01C02H760.4°60.0°
H5C01C02H660.4°60.1°
H5C01C02H7179.6°59.9°
H6C02C03H8178.8°NaN°
H6C02C03H961.4°60.0°
H7C02C03H859.6°60.0°
H7C02C03H9179.3°180.0°
H10C05C06H12174.6°60.0°
H10C05C06H1366.1°180.0°
H11C05C06H1254.9°180.0°
H11C05C06H13174.1°60.0°
H12C06C07H1459.6°179.9°
H12C06C07H1560.4°60.0°
H12C06C07H16179.6°60.0°
H13C06C07H1459.6°59.9°
H13C06C07H15179.7°180.0°
H13C06C07H1660.4°60.0°
H14C07H15H16120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon