RSX
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O1 | P1 | doub | 1.48Å | 1.47Å | |
| C3 | P1 | sing | 1.82Å | 1.83Å | |
| P1 | O2 | sing | 1.61Å | 1.50Å | |
| P1 | O3 | sing | 1.61Å | 1.51Å | |
| O3 | HO3 | sing | 0.97Å | 0.95Å | |
| O2 | HO2 | sing | 0.97Å | 0.95Å | |
| P2 | C3 | sing | 1.82Å | 1.81Å | |
| C4 | C3 | sing | 1.54Å | 1.55Å | |
| C3 | C2 | sing | 1.54Å | 1.54Å | |
| O4 | P2 | doub | 1.48Å | 1.53Å | |
| O6 | P2 | sing | 1.61Å | 1.54Å | |
| P2 | O5 | sing | 1.61Å | 1.53Å | |
| O5 | HO5 | sing | 0.97Å | 0.95Å | |
| O6 | HO6 | sing | 0.97Å | 0.95Å | |
| C4 | C5 | sing | 1.56Å | 1.52Å | |
| C4 | H4 | sing | 1.09Å | 1.10Å | |
| C4 | H4A | sing | 1.09Å | 1.10Å | |
| N1 | C5 | sing | 1.47Å | 1.46Å | |
| C5 | C1 | sing | 1.54Å | 1.52Å | |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C1 | C2 | sing | 1.53Å | 1.54Å | |
| C2 | H2 | sing | 1.09Å | 1.10Å | |
| C2 | H2A | sing | 1.09Å | 1.10Å | |
| C1 | C9 | sing | 1.51Å | 1.54Å | |
| C1 | H1 | sing | 1.09Å | 1.10Å | |
| C8 | C9 | sing | 1.53Å | 1.53Å | |
| C9 | H9 | sing | 1.09Å | 1.10Å | |
| C9 | H9A | sing | 1.09Å | 1.10Å | |
| C7 | C8 | sing | 1.53Å | 1.50Å | |
| C8 | H8 | sing | 1.09Å | 1.10Å | |
| C8 | H8A | sing | 1.09Å | 1.10Å | |
| N1 | C7 | sing | 1.47Å | 1.46Å | |
| C7 | H7 | sing | 1.09Å | 1.10Å | |
| C7 | H7A | sing | 1.09Å | 1.10Å | |
| N1 | HN1 | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1 | P1 | C3 | 107.1° | 109.5° |
| O1 | P1 | O2 | 111.6° | 109.5° |
| O1 | P1 | O3 | 115.0° | 109.4° |
| C3 | P1 | O2 | 107.4° | 109.5° |
| C3 | P1 | O3 | 106.5° | 109.5° |
| P1 | C3 | P2 | 110.4° | 110.0° |
| P1 | C3 | C4 | 109.8° | 110.0° |
| P1 | C3 | C2 | 109.0° | 110.1° |
| O2 | P1 | O3 | 108.9° | 109.5° |
| P1 | O2 | HO2 | 109.5° | 114.0° |
| P1 | O3 | HO3 | 109.5° | 114.0° |
| P2 | C3 | C4 | 109.3° | 110.1° |
| P2 | C3 | C2 | 112.2° | 110.1° |
| C3 | P2 | O4 | 110.5° | 109.4° |
| C3 | P2 | O6 | 109.2° | 109.5° |
| C3 | P2 | O5 | 113.8° | 109.5° |
| C4 | C3 | C2 | 106.1° | 106.5° |
| C3 | C4 | C5 | 106.7° | 103.9° |
| C3 | C4 | H4 | 110.4° | 110.6° |
| C3 | C4 | H4A | 111.0° | 110.5° |
| C3 | C2 | C1 | 106.1° | 106.0° |
| C3 | C2 | H2 | 110.6° | 110.1° |
| C3 | C2 | H2A | 111.3° | 110.1° |
| O4 | P2 | O6 | 102.0° | 109.4° |
| O4 | P2 | O5 | 106.6° | 109.5° |
| O6 | P2 | O5 | 114.1° | 109.5° |
| P2 | O6 | HO6 | 109.5° | 114.0° |
| P2 | O5 | HO5 | 109.5° | 114.0° |
| C5 | C4 | H4 | 110.4° | 110.5° |
| C5 | C4 | H4A | 111.0° | 110.5° |
| C4 | C5 | N1 | 109.4° | 106.6° |
| C4 | C5 | C1 | 104.0° | 101.7° |
| C4 | C5 | H5 | 113.8° | 112.4° |
| H4 | C4 | H4A | 107.4° | 110.6° |
| N1 | C5 | C1 | 111.6° | 110.7° |
| N1 | C5 | H5 | 106.5° | 112.6° |
| C5 | N1 | C7 | 120.9° | 112.7° |
| C5 | N1 | HN1 | 105.8° | 111.0° |
| C1 | C5 | H5 | 111.7° | 112.2° |
| C5 | C1 | C2 | 107.0° | 104.9° |
| C5 | C1 | C9 | 113.9° | 112.7° |
| C5 | C1 | H1 | 109.8° | 109.1° |
| C1 | C2 | H2 | 110.6° | 110.1° |
| C1 | C2 | H2A | 111.4° | 110.3° |
| C2 | C1 | C9 | 113.8° | 112.3° |
| C2 | C1 | H1 | 109.9° | 109.0° |
| H2 | C2 | H2A | 106.9° | 110.2° |
| C9 | C1 | H1 | 102.3° | 108.6° |
| C1 | C9 | C8 | 115.4° | 110.9° |
| C1 | C9 | H9 | 107.5° | 109.1° |
| C1 | C9 | H9A | 106.2° | 109.2° |
| C8 | C9 | H9 | 107.6° | 109.3° |
| C8 | C9 | H9A | 106.2° | 109.2° |
| C9 | C8 | C7 | 113.2° | 108.2° |
| C9 | C8 | H8 | 108.3° | 109.7° |
| C9 | C8 | H8A | 107.4° | 109.7° |
| H9 | C9 | H9A | 114.2° | 109.2° |
| C7 | C8 | H8 | 108.3° | 109.8° |
| C7 | C8 | H8A | 107.4° | 109.8° |
| C8 | C7 | N1 | 110.1° | 108.6° |
| C8 | C7 | H7 | 109.3° | 109.6° |
| C8 | C7 | H7A | 109.1° | 109.7° |
| H8 | C8 | H8A | 112.4° | 109.7° |
| N1 | C7 | H7 | 109.2° | 109.6° |
| N1 | C7 | H7A | 109.1° | 109.7° |
| C7 | N1 | HN1 | 105.8° | 111.0° |
| H7 | C7 | H7A | 110.0° | 109.6° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1 | P1 | C3 | O2 | 120.0° | 120.1° |
| O1 | P1 | C3 | O3 | 123.5° | 119.9° |
| O1 | P1 | O2 | O3 | 128.0° | 120.0° |
| O1 | P1 | O3 | HO3 | 130.8° | 60.0° |
| O1 | P1 | O2 | HO2 | 51.8° | 179.9° |
| O1 | P1 | C3 | P2 | 64.6° | 51.5° |
| O1 | P1 | C3 | C4 | 56.0° | 173.0° |
| O1 | P1 | C3 | C2 | 171.8° | 70.0° |
| C3 | P1 | O2 | O3 | 114.9° | 120.0° |
| C3 | P1 | O3 | HO3 | 110.8° | 180.0° |
| C3 | P1 | O2 | HO2 | 65.2° | 60.0° |
| P1 | C3 | P2 | C4 | 120.8° | 121.4° |
| P1 | C3 | P2 | C2 | 121.8° | 121.5° |
| P1 | C3 | C4 | C2 | 117.6° | 119.3° |
| P1 | C3 | P2 | O4 | 55.2° | 55.8° |
| P1 | C3 | P2 | O6 | 166.6° | 175.7° |
| P1 | C3 | P2 | O5 | 64.7° | 64.3° |
| P1 | C3 | C4 | C5 | 136.9° | 143.5° |
| P1 | C3 | C4 | H4 | 16.9° | 24.9° |
| P1 | C3 | C4 | H4A | 102.0° | 97.9° |
| P1 | C3 | C2 | C1 | 118.2° | 119.0° |
| P1 | C3 | C2 | H2 | 121.8° | 122.0° |
| P1 | C3 | C2 | H2A | 3.1° | 0.2° |
| O2 | P1 | O3 | HO3 | 4.7° | 60.0° |
| O2 | P1 | C3 | P2 | 55.4° | 68.5° |
| O2 | P1 | C3 | C4 | 175.9° | 52.9° |
| O2 | P1 | C3 | C2 | 68.3° | 170.0° |
| O3 | P1 | O2 | HO2 | 179.9° | 60.0° |
| O3 | P1 | C3 | P2 | 171.9° | 171.5° |
| O3 | P1 | C3 | C4 | 67.5° | 67.1° |
| O3 | P1 | C3 | C2 | 48.3° | 50.0° |
| P2 | C3 | C4 | C2 | 121.2° | 119.3° |
| C3 | P2 | O4 | O6 | 115.9° | 120.0° |
| C3 | P2 | O4 | O5 | 124.1° | 120.1° |
| C3 | P2 | O6 | O5 | 128.5° | 120.1° |
| C3 | P2 | O5 | HO5 | 174.5° | 59.9° |
| C3 | P2 | O6 | HO6 | 123.2° | 179.9° |
| P2 | C3 | C4 | C5 | 101.9° | 95.1° |
| P2 | C3 | C4 | H4 | 138.2° | 146.3° |
| P2 | C3 | C4 | H4A | 19.2° | 23.5° |
| P2 | C3 | C2 | C1 | 119.2° | 119.6° |
| P2 | C3 | C2 | H2 | 0.8° | 0.5° |
| P2 | C3 | C2 | H2A | 119.5° | 121.2° |
| C4 | C3 | P2 | O4 | 65.6° | 177.2° |
| C4 | C3 | P2 | O6 | 45.8° | 62.9° |
| C4 | C3 | P2 | O5 | 174.5° | 57.2° |
| C3 | C4 | C5 | H4 | 120.0° | 118.6° |
| C3 | C4 | C5 | H4A | 121.1° | 118.6° |
| C3 | C4 | H4 | H4A | 121.1° | 122.8° |
| C3 | C4 | C5 | N1 | 88.4° | 76.9° |
| C3 | C4 | C5 | C1 | 30.9° | 39.1° |
| C3 | C4 | C5 | H5 | 152.6° | 159.3° |
| C4 | C3 | C2 | C1 | 0.1° | 0.3° |
| C4 | C3 | C2 | H2 | 120.1° | 118.8° |
| C4 | C3 | C2 | H2A | 121.2° | 119.5° |
| C2 | C3 | P2 | O4 | 177.0° | 65.7° |
| C2 | C3 | P2 | O6 | 71.6° | 54.2° |
| C2 | C3 | P2 | O5 | 57.1° | 174.2° |
| C2 | C3 | C4 | C5 | 19.3° | 24.2° |
| C2 | C3 | C4 | H4 | 100.7° | 94.4° |
| C2 | C3 | C4 | H4A | 140.4° | 142.8° |
| C3 | C2 | C1 | C5 | 19.1° | 25.1° |
| C3 | C2 | C1 | H2 | 120.0° | 119.1° |
| C3 | C2 | C1 | H2A | 121.3° | 119.1° |
| C3 | C2 | H2 | H2A | 121.4° | 121.7° |
| C3 | C2 | C1 | C9 | 145.9° | 147.9° |
| C3 | C2 | C1 | H1 | 100.0° | 91.7° |
| O4 | P2 | O6 | O5 | 114.6° | 120.0° |
| O4 | P2 | O5 | HO5 | 52.4° | 179.9° |
| O4 | P2 | O6 | HO6 | 6.3° | 60.0° |
| O6 | P2 | O5 | HO5 | 59.4° | 60.1° |
| O5 | P2 | O6 | HO6 | 108.2° | 60.0° |
| C5 | C4 | H4 | H4A | 121.1° | 122.8° |
| C4 | C5 | N1 | C1 | 114.5° | 109.8° |
| C4 | C5 | N1 | H5 | 123.3° | 123.7° |
| C4 | C5 | C1 | H5 | 123.1° | 120.3° |
| C4 | C5 | C1 | C2 | 30.9° | 39.7° |
| C4 | C5 | C1 | C9 | 157.7° | 162.3° |
| C4 | C5 | C1 | H1 | 88.3° | 77.0° |
| C4 | C5 | N1 | C7 | 163.4° | 166.0° |
| C4 | C5 | N1 | HN1 | 76.6° | 68.8° |
| H4 | C4 | C5 | N1 | 151.6° | 164.5° |
| H4 | C4 | C5 | C1 | 89.1° | 79.5° |
| H4 | C4 | C5 | H5 | 32.6° | 40.7° |
| H4A | C4 | C5 | N1 | 32.6° | 41.7° |
| H4A | C4 | C5 | C1 | 151.9° | 157.7° |
| H4A | C4 | C5 | H5 | 86.3° | 82.1° |
| N1 | C5 | C1 | H5 | 119.1° | 126.7° |
| N1 | C5 | C1 | C2 | 86.9° | 73.3° |
| N1 | C5 | C1 | C9 | 39.8° | 49.3° |
| N1 | C5 | C1 | H1 | 153.9° | 170.0° |
| C5 | N1 | C7 | C8 | 53.0° | 63.7° |
| C5 | N1 | C7 | HN1 | 120.0° | 125.2° |
| C5 | N1 | C7 | H7 | 173.0° | 176.6° |
| C5 | N1 | C7 | H7A | 66.8° | 56.2° |
| C5 | C1 | C2 | C9 | 126.8° | 122.8° |
| C5 | C1 | C2 | H1 | 119.2° | 116.8° |
| C5 | C1 | C2 | H2 | 100.9° | 94.0° |
| C5 | C1 | C2 | H2A | 140.4° | 144.2° |
| C5 | C1 | C9 | H1 | 118.4° | 121.0° |
| C5 | C1 | C9 | C8 | 40.7° | 51.0° |
| C5 | C1 | C9 | H9 | 160.7° | 171.5° |
| C5 | C1 | C9 | H9A | 76.6° | 69.3° |
| C1 | C5 | N1 | C7 | 48.9° | 56.1° |
| C1 | C5 | N1 | HN1 | 168.9° | 178.7° |
| H5 | C5 | C1 | C2 | 154.0° | 160.0° |
| H5 | C5 | C1 | C9 | 79.3° | 77.4° |
| H5 | C5 | C1 | H1 | 34.8° | 43.3° |
| H5 | C5 | N1 | C7 | 73.3° | 70.4° |
| H5 | C5 | N1 | HN1 | 46.7° | 54.8° |
| C1 | C2 | H2 | H2A | 121.4° | 121.8° |
| C2 | C1 | C9 | H1 | 118.5° | 120.7° |
| C2 | C1 | C9 | C8 | 82.3° | 67.2° |
| C2 | C1 | C9 | H9 | 37.6° | 53.2° |
| C2 | C1 | C9 | H9A | 160.3° | 172.5° |
| H2 | C2 | C1 | C9 | 25.9° | 28.8° |
| H2 | C2 | C1 | H1 | 140.0° | 149.3° |
| H2A | C2 | C1 | C9 | 92.8° | 93.0° |
| H2A | C2 | C1 | H1 | 21.3° | 27.5° |
| C1 | C9 | C8 | H9 | 120.0° | 120.3° |
| C1 | C9 | C8 | H9A | 117.4° | 120.3° |
| C1 | C9 | H9 | H9A | 117.6° | 119.3° |
| C1 | C9 | C8 | C7 | 45.1° | 57.0° |
| C1 | C9 | C8 | H8 | 74.9° | 62.7° |
| C1 | C9 | C8 | H8A | 163.5° | 176.8° |
| H1 | C1 | C9 | C8 | 159.2° | 172.1° |
| H1 | C1 | C9 | H9 | 80.8° | 67.5° |
| H1 | C1 | C9 | H9A | 41.9° | 51.8° |
| C8 | C9 | H9 | H9A | 117.6° | 119.3° |
| C9 | C8 | C7 | H8 | 120.0° | 119.7° |
| C9 | C8 | C7 | H8A | 118.4° | 119.7° |
| C9 | C8 | H8 | H8A | 118.5° | 120.6° |
| C9 | C8 | C7 | N1 | 47.9° | 62.6° |
| C9 | C8 | C7 | H7 | 167.9° | 177.7° |
| C9 | C8 | C7 | H7A | 71.9° | 57.3° |
| H9 | C9 | C8 | C7 | 165.1° | 177.4° |
| H9 | C9 | C8 | H8 | 45.1° | 57.7° |
| H9 | C9 | C8 | H8A | 76.5° | 62.9° |
| H9A | C9 | C8 | C7 | 72.2° | 63.3° |
| H9A | C9 | C8 | H8 | 167.8° | 177.0° |
| H9A | C9 | C8 | H8A | 46.1° | 56.5° |
| C7 | C8 | H8 | H8A | 118.5° | 120.7° |
| C8 | C7 | N1 | H7 | 120.0° | 119.7° |
| C8 | C7 | N1 | H7A | 119.7° | 119.9° |
| C8 | C7 | H7 | H7A | 119.7° | 120.4° |
| C8 | C7 | N1 | HN1 | 173.0° | 171.1° |
| H8 | C8 | C7 | N1 | 72.1° | 57.1° |
| H8 | C8 | C7 | H7 | 47.9° | 62.6° |
| H8 | C8 | C7 | H7A | 168.2° | 177.0° |
| H8A | C8 | C7 | N1 | 166.3° | 177.7° |
| H8A | C8 | C7 | H7 | 73.7° | 58.0° |
| H8A | C8 | C7 | H7A | 46.5° | 62.3° |
| N1 | C7 | H7 | H7A | 119.7° | 120.5° |
| H7 | C7 | N1 | HN1 | 67.0° | 51.4° |
| H7A | C7 | N1 | HN1 | 53.2° | 69.0° |
