RQ3
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O2 | sing | 1.34Å | 1.26Å | |
C1 | O3 | doub | 1.21Å | 1.25Å | |
C1 | C4 | sing | 1.51Å | 1.50Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C4 | C5 | sing | 1.53Å | 1.53Å | |
C4 | C6 | sing | 1.53Å | 1.55Å | |
C4 | O7 | sing | 1.43Å | 1.45Å | |
C5 | H51 | sing | 1.09Å | 1.11Å | |
C5 | H52 | sing | 1.09Å | 1.11Å | |
C5 | H53 | sing | 1.09Å | 1.12Å | |
C6 | H61 | sing | 1.09Å | 1.11Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
C6 | H63 | sing | 1.09Å | 1.11Å | |
O7 | C8 | sing | 1.36Å | 1.49Å | |
C8 | C9 | doub | 1.39Å | 1.39Å | Aromatic |
C8 | C12 | sing | 1.39Å | 1.40Å | Aromatic |
C9 | C10 | sing | 1.38Å | 1.38Å | Aromatic |
C9 | H91 | sing | 1.08Å | 1.10Å | |
C10 | C11 | doub | 1.38Å | 1.38Å | Aromatic |
C10 | H101 | sing | 1.08Å | 1.10Å | |
C11 | C13 | sing | 1.38Å | 1.39Å | Aromatic |
C11 | C14 | sing | 1.51Å | 1.43Å | |
C12 | C13 | doub | 1.38Å | 1.40Å | Aromatic |
C12 | H121 | sing | 1.08Å | 1.10Å | |
C13 | H131 | sing | 1.08Å | 1.10Å | |
C14 | C15 | sing | 1.51Å | 1.54Å | |
C14 | H141 | sing | 1.09Å | 1.11Å | |
C14 | H142 | sing | 1.09Å | 1.11Å | |
C15 | O16 | doub | 1.21Å | 1.23Å | |
C15 | N17 | sing | 1.35Å | 1.33Å | |
N17 | C18 | sing | 1.40Å | 1.38Å | |
N17 | H171 | sing | 0.97Å | 1.02Å | |
C18 | C19 | doub | 1.39Å | 1.40Å | Aromatic |
C18 | C22 | sing | 1.39Å | 1.39Å | Aromatic |
C19 | C20 | sing | 1.38Å | 1.39Å | Aromatic |
C19 | H191 | sing | 1.08Å | 1.10Å | |
C20 | C21 | doub | 1.38Å | 1.39Å | Aromatic |
C20 | C24 | sing | 1.51Å | 1.50Å | |
C21 | C23 | sing | 1.38Å | 1.39Å | Aromatic |
C21 | H211 | sing | 1.08Å | 1.10Å | |
C22 | C23 | doub | 1.38Å | 1.37Å | Aromatic |
C22 | H221 | sing | 1.08Å | 1.10Å | |
C23 | C25 | sing | 1.51Å | 1.50Å | |
C24 | H241 | sing | 1.09Å | 1.12Å | |
C24 | H242 | sing | 1.09Å | 1.11Å | |
C24 | H243 | sing | 1.09Å | 1.12Å | |
C25 | H251 | sing | 1.09Å | 1.11Å | |
C25 | H252 | sing | 1.09Å | 1.12Å | |
C25 | H253 | sing | 1.09Å | 1.12Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | C1 | O3 | 122.2° | 120.0° |
O2 | C1 | C4 | 118.5° | 120.0° |
C1 | O2 | HO2 | 122.2° | 119.9° |
O3 | C1 | C4 | 119.4° | 120.0° |
C1 | C4 | C5 | 108.0° | 109.5° |
C1 | C4 | C6 | 110.5° | 109.5° |
C1 | C4 | O7 | 108.6° | 109.5° |
C5 | C4 | C6 | 108.8° | 109.5° |
C5 | C4 | O7 | 108.5° | 109.5° |
C4 | C5 | H51 | 108.0° | 109.5° |
C4 | C5 | H52 | 112.7° | 109.5° |
C4 | C5 | H53 | 112.7° | 109.5° |
C6 | C4 | O7 | 112.3° | 109.5° |
C4 | C6 | H61 | 110.5° | 109.4° |
C4 | C6 | H62 | 111.8° | 109.5° |
C4 | C6 | H63 | 111.8° | 109.5° |
C4 | O7 | C8 | 126.1° | 106.8° |
H51 | C5 | H52 | 112.8° | 109.4° |
H51 | C5 | H53 | 112.7° | 109.5° |
H52 | C5 | H53 | 97.7° | 109.5° |
H61 | C6 | H62 | 111.8° | 109.5° |
H61 | C6 | H63 | 111.9° | 109.5° |
H62 | C6 | H63 | 98.6° | 109.5° |
O7 | C8 | C9 | 118.1° | 120.1° |
O7 | C8 | C12 | 122.5° | 120.1° |
C9 | C8 | C12 | 119.4° | 119.8° |
C8 | C9 | C10 | 120.4° | 120.0° |
C8 | C9 | H91 | 120.3° | 120.0° |
C8 | C12 | C13 | 119.6° | 120.0° |
C8 | C12 | H121 | 120.1° | 120.0° |
C10 | C9 | H91 | 119.3° | 120.0° |
C9 | C10 | C11 | 120.5° | 120.0° |
C9 | C10 | H101 | 119.7° | 120.0° |
C11 | C10 | H101 | 119.7° | 119.9° |
C10 | C11 | C13 | 120.2° | 120.1° |
C10 | C11 | C14 | 119.4° | 120.0° |
C13 | C11 | C14 | 120.5° | 120.0° |
C11 | C13 | C12 | 119.9° | 120.0° |
C11 | C13 | H131 | 119.5° | 120.0° |
C11 | C14 | C15 | 113.8° | 109.5° |
C11 | C14 | H141 | 110.7° | 109.5° |
C11 | C14 | H142 | 110.7° | 109.5° |
C13 | C12 | H121 | 120.3° | 120.0° |
C12 | C13 | H131 | 120.6° | 120.0° |
C15 | C14 | H141 | 110.6° | 109.5° |
C15 | C14 | H142 | 110.6° | 109.5° |
C14 | C15 | O16 | 120.2° | 120.0° |
C14 | C15 | N17 | 116.4° | 120.0° |
H141 | C14 | H142 | 99.6° | 109.4° |
O16 | C15 | N17 | 121.7° | 120.0° |
C15 | N17 | C18 | 125.9° | 120.0° |
C15 | N17 | H171 | 114.9° | 120.0° |
C18 | N17 | H171 | 119.2° | 120.0° |
N17 | C18 | C19 | 120.6° | 120.1° |
N17 | C18 | C22 | 119.0° | 120.0° |
C19 | C18 | C22 | 119.8° | 119.9° |
C18 | C19 | C20 | 119.9° | 120.0° |
C18 | C19 | H191 | 120.8° | 120.0° |
C18 | C22 | C23 | 120.3° | 119.9° |
C18 | C22 | H221 | 120.5° | 120.1° |
C20 | C19 | H191 | 119.3° | 120.0° |
C19 | C20 | C21 | 119.6° | 120.0° |
C19 | C20 | C24 | 120.1° | 120.0° |
C21 | C20 | C24 | 120.2° | 120.0° |
C20 | C21 | C23 | 120.2° | 120.2° |
C20 | C21 | H211 | 119.7° | 119.9° |
C20 | C24 | H241 | 120.1° | 109.5° |
C20 | C24 | H242 | 108.4° | 109.5° |
C20 | C24 | H243 | 108.4° | 109.5° |
C23 | C21 | H211 | 120.1° | 120.0° |
C21 | C23 | C22 | 120.2° | 120.1° |
C21 | C23 | C25 | 120.4° | 120.0° |
C23 | C22 | H221 | 119.2° | 120.0° |
C22 | C23 | C25 | 119.3° | 120.0° |
C23 | C25 | H251 | 120.5° | 109.5° |
C23 | C25 | H252 | 108.3° | 109.5° |
C23 | C25 | H253 | 108.3° | 109.5° |
H241 | C24 | H242 | 108.4° | 109.5° |
H241 | C24 | H243 | 108.3° | 109.5° |
H242 | C24 | H243 | 101.6° | 109.4° |
H251 | C25 | H252 | 108.3° | 109.5° |
H251 | C25 | H253 | 108.3° | 109.5° |
H252 | C25 | H253 | 101.6° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | C1 | O3 | C4 | 178.6° | 179.9° |
O2 | C1 | C4 | C5 | 86.1° | 60.0° |
O2 | C1 | C4 | C6 | 155.0° | 60.0° |
O2 | C1 | C4 | O7 | 31.4° | 180.0° |
O3 | C1 | O2 | HO2 | 180.0° | 0.1° |
O3 | C1 | C4 | C5 | 95.3° | 120.0° |
O3 | C1 | C4 | C6 | 23.6° | 120.0° |
O3 | C1 | C4 | O7 | 147.2° | 0.1° |
C4 | C1 | O2 | HO2 | 1.4° | 180.0° |
C1 | C4 | C5 | C6 | 120.0° | 120.0° |
C1 | C4 | C5 | O7 | 117.6° | 120.0° |
C1 | C4 | C6 | O7 | 121.5° | 120.0° |
C1 | C4 | C5 | H51 | 180.0° | 67.1° |
C1 | C4 | C5 | H52 | 54.7° | 173.0° |
C1 | C4 | C5 | H53 | 54.7° | 53.0° |
C1 | C4 | C6 | H61 | 180.0° | 66.9° |
C1 | C4 | C6 | H62 | 54.8° | 53.1° |
C1 | C4 | C6 | H63 | 54.7° | 173.1° |
C1 | C4 | O7 | C8 | 73.0° | 177.3° |
C5 | C4 | C6 | O7 | 120.1° | 120.0° |
C4 | C5 | H51 | H52 | 125.3° | 119.9° |
C4 | C5 | H51 | H53 | 125.2° | 120.1° |
C4 | C5 | H52 | H53 | 118.7° | 120.1° |
C5 | C4 | C6 | H61 | 61.6° | 173.1° |
C5 | C4 | C6 | H62 | 173.2° | 66.9° |
C5 | C4 | C6 | H63 | 63.7° | 53.1° |
C5 | C4 | O7 | C8 | 169.8° | 62.7° |
C6 | C4 | C5 | H51 | 60.0° | 172.9° |
C6 | C4 | C5 | H52 | 65.3° | 53.0° |
C6 | C4 | C5 | H53 | 174.7° | 67.0° |
C4 | C6 | H61 | H62 | 125.2° | 120.0° |
C4 | C6 | H61 | H63 | 125.2° | 120.0° |
C4 | C6 | H62 | H63 | 117.7° | 120.0° |
C6 | C4 | O7 | C8 | 49.6° | 57.3° |
O7 | C4 | C5 | H51 | 62.4° | 52.9° |
O7 | C4 | C5 | H52 | 172.3° | 67.0° |
O7 | C4 | C5 | H53 | 62.8° | 173.0° |
O7 | C4 | C6 | H61 | 58.5° | 53.1° |
O7 | C4 | C6 | H62 | 66.7° | 173.1° |
O7 | C4 | C6 | H63 | 176.2° | 66.9° |
C4 | O7 | C8 | C9 | 153.6° | 90.2° |
C4 | O7 | C8 | C12 | 27.3° | 89.8° |
H51 | C5 | H52 | H53 | 118.7° | 120.0° |
H61 | C6 | H62 | H63 | 117.8° | 120.0° |
O7 | C8 | C9 | C12 | 179.2° | 180.0° |
O7 | C8 | C9 | C10 | 179.1° | 179.9° |
O7 | C8 | C9 | H91 | 0.8° | 0.1° |
O7 | C8 | C12 | C13 | 179.1° | 179.7° |
O7 | C8 | C12 | H121 | 0.8° | 0.0° |
C8 | C9 | C10 | H91 | 180.0° | 180.0° |
C8 | C9 | C10 | C11 | 0.1° | 0.0° |
C8 | C9 | C10 | H101 | 180.0° | 180.0° |
C9 | C8 | C12 | C13 | 0.0° | 0.3° |
C9 | C8 | C12 | H121 | 180.0° | 180.0° |
C12 | C8 | C9 | C10 | 0.0° | 0.0° |
C12 | C8 | C9 | H91 | 180.0° | 180.0° |
C8 | C12 | C13 | C11 | 0.0° | 0.5° |
C8 | C12 | C13 | H121 | 179.9° | 179.7° |
C8 | C12 | C13 | H131 | 180.0° | 180.0° |
C9 | C10 | C11 | H101 | 180.0° | 180.0° |
C9 | C10 | C11 | C13 | 0.2° | 0.3° |
C9 | C10 | C11 | C14 | 179.2° | 180.0° |
H91 | C9 | C10 | C11 | 179.9° | 180.0° |
H91 | C9 | C10 | H101 | 0.0° | 0.0° |
C10 | C11 | C13 | C14 | 179.3° | 179.8° |
C10 | C11 | C13 | C12 | 0.1° | 0.5° |
C10 | C11 | C13 | H131 | 179.9° | 180.0° |
C10 | C11 | C14 | C15 | 78.0° | 90.0° |
C10 | C11 | C14 | H141 | 156.7° | 30.1° |
C10 | C11 | C14 | H142 | 47.3° | 150.0° |
H101 | C10 | C11 | C13 | 179.9° | 179.7° |
H101 | C10 | C11 | C14 | 0.8° | 0.0° |
C11 | C13 | C12 | H131 | 180.0° | 179.5° |
C11 | C13 | C12 | H121 | 179.9° | 179.8° |
C13 | C11 | C14 | C15 | 101.3° | 90.2° |
C13 | C11 | C14 | H141 | 23.9° | 149.7° |
C13 | C11 | C14 | H142 | 133.4° | 29.7° |
C14 | C11 | C13 | C12 | 179.2° | 179.7° |
C14 | C11 | C13 | H131 | 0.8° | 0.2° |
C11 | C14 | C15 | H141 | 125.3° | 120.1° |
C11 | C14 | C15 | H142 | 125.3° | 120.0° |
C11 | C14 | H141 | H142 | 116.5° | 120.0° |
C11 | C14 | C15 | O16 | 2.6° | 0.0° |
C11 | C14 | C15 | N17 | 163.1° | 180.0° |
H121 | C12 | C13 | H131 | 0.1° | 0.3° |
C15 | C14 | H141 | H142 | 116.5° | 120.0° |
C14 | C15 | O16 | N17 | 164.9° | 180.0° |
C14 | C15 | N17 | C18 | 179.8° | 175.4° |
C14 | C15 | N17 | H171 | 0.3° | 4.6° |
H141 | C14 | C15 | O16 | 122.7° | 120.1° |
H141 | C14 | C15 | N17 | 71.6° | 59.9° |
H142 | C14 | C15 | O16 | 127.9° | 120.0° |
H142 | C14 | C15 | N17 | 37.9° | 60.0° |
O16 | C15 | N17 | C18 | 14.7° | 4.6° |
O16 | C15 | N17 | H171 | 165.2° | 175.4° |
C15 | N17 | C18 | H171 | 180.0° | 180.0° |
C15 | N17 | C18 | C19 | 39.2° | 145.7° |
C15 | N17 | C18 | C22 | 150.7° | 34.1° |
N17 | C18 | C19 | C22 | 170.0° | 179.8° |
N17 | C18 | C19 | C20 | 169.8° | 179.7° |
N17 | C18 | C19 | H191 | 10.2° | 0.2° |
N17 | C18 | C22 | C23 | 169.9° | 180.0° |
N17 | C18 | C22 | H221 | 10.1° | 0.1° |
H171 | N17 | C18 | C19 | 140.8° | 34.3° |
H171 | N17 | C18 | C22 | 29.3° | 145.9° |
C18 | C19 | C20 | H191 | 180.0° | 179.5° |
C18 | C19 | C20 | C21 | 0.0° | 0.5° |
C18 | C19 | C20 | C24 | 179.7° | 179.8° |
C19 | C18 | C22 | C23 | 0.3° | 0.2° |
C19 | C18 | C22 | H221 | 179.7° | 179.8° |
C22 | C18 | C19 | C20 | 0.2° | 0.5° |
C22 | C18 | C19 | H191 | 179.8° | 180.0° |
C18 | C22 | C23 | C21 | 0.1° | 0.0° |
C18 | C22 | C23 | H221 | 180.0° | 179.9° |
C18 | C22 | C23 | C25 | 179.7° | 180.0° |
C19 | C20 | C21 | C24 | 179.7° | 179.7° |
C19 | C20 | C21 | C23 | 0.2° | 0.3° |
C19 | C20 | C21 | H211 | 179.8° | 179.7° |
C19 | C20 | C24 | H241 | 180.0° | 90.3° |
C19 | C20 | C24 | H242 | 54.8° | 29.7° |
C19 | C20 | C24 | H243 | 54.7° | 149.7° |
H191 | C19 | C20 | C21 | 180.0° | 180.0° |
H191 | C19 | C20 | C24 | 0.3° | 0.3° |
C20 | C21 | C23 | H211 | 180.0° | 180.0° |
C20 | C21 | C23 | C22 | 0.2° | 0.0° |
C20 | C21 | C23 | C25 | 179.5° | 180.0° |
C21 | C20 | C24 | H241 | 0.3° | 90.0° |
C21 | C20 | C24 | H242 | 125.5° | 150.0° |
C21 | C20 | C24 | H243 | 125.0° | 30.0° |
C24 | C20 | C21 | C23 | 179.5° | 180.0° |
C24 | C20 | C21 | H211 | 0.5° | 0.0° |
C20 | C24 | H241 | H242 | 125.3° | 120.0° |
C20 | C24 | H241 | H243 | 125.3° | 120.0° |
C20 | C24 | H242 | H243 | 114.1° | 120.0° |
C21 | C23 | C22 | C25 | 179.7° | 180.0° |
C21 | C23 | C22 | H221 | 179.9° | 179.9° |
C21 | C23 | C25 | H251 | 180.0° | 90.0° |
C21 | C23 | C25 | H252 | 54.7° | 150.0° |
C21 | C23 | C25 | H253 | 54.7° | 30.0° |
H211 | C21 | C23 | C22 | 179.8° | 179.9° |
H211 | C21 | C23 | C25 | 0.5° | 0.0° |
C22 | C23 | C25 | H251 | 0.3° | 89.9° |
C22 | C23 | C25 | H252 | 125.6° | 30.1° |
C22 | C23 | C25 | H253 | 125.0° | 150.0° |
H221 | C22 | C23 | C25 | 0.3° | 0.1° |
C23 | C25 | H251 | H252 | 125.3° | 120.0° |
C23 | C25 | H251 | H253 | 125.3° | 120.0° |
C23 | C25 | H252 | H253 | 113.9° | 120.0° |
H241 | C24 | H242 | H243 | 114.0° | 120.0° |
H251 | C25 | H252 | H253 | 113.9° | 120.0° |