RNK
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C08 | S10 | sing | 1.76Å | 1.72Å | Aromatic |
C08 | C06 | doub | 1.33Å | 1.35Å | Aromatic |
S10 | C11 | sing | 1.76Å | 1.73Å | Aromatic |
C06 | C05 | sing | 1.38Å | 1.43Å | Aromatic |
C11 | C05 | doub | 1.33Å | 1.37Å | Aromatic |
C11 | C12 | sing | 1.51Å | 1.52Å | |
C05 | C01 | sing | 1.51Å | 1.50Å | |
C12 | N15 | sing | 1.46Å | 1.45Å | |
CL2 | C28 | sing | 1.74Å | 1.71Å | |
N15 | C17 | sing | 1.38Å | 1.35Å | |
C17 | C28 | doub | 1.38Å | 1.38Å | |
C17 | C18 | sing | 1.41Å | 1.44Å | |
C28 | C26 | sing | 1.40Å | 1.43Å | |
C26 | O27 | doub | 1.22Å | 1.23Å | |
C26 | N21 | sing | 1.35Å | 1.38Å | |
C18 | N20 | doub | 1.30Å | 1.29Å | |
N21 | N20 | sing | 1.40Å | 1.36Å | |
N21 | C22 | sing | 1.47Å | 1.46Å | |
C22 | H1 | sing | 1.09Å | 1.10Å | |
C22 | H2 | sing | 1.09Å | 1.10Å | |
C22 | H3 | sing | 1.09Å | 1.10Å | |
C01 | H4 | sing | 1.09Å | 1.10Å | |
C01 | H5 | sing | 1.09Å | 1.10Å | |
C01 | H6 | sing | 1.09Å | 1.10Å | |
C06 | H7 | sing | 1.08Å | 1.08Å | |
C08 | H8 | sing | 1.08Å | 1.08Å | |
C12 | H9 | sing | 1.09Å | 1.10Å | |
C12 | H10 | sing | 1.09Å | 1.10Å | |
N15 | H11 | sing | 0.97Å | 1.00Å | |
C18 | H12 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
S10 | C08 | C06 | 111.6° | 109.6° |
C08 | S10 | C11 | 91.9° | 91.0° |
S10 | C08 | H8 | 124.2° | 125.2° |
C08 | C06 | C05 | 113.2° | 115.0° |
C08 | C06 | H7 | 123.4° | 122.5° |
C06 | C08 | H8 | 124.2° | 125.3° |
S10 | C11 | C05 | 111.0° | 109.6° |
S10 | C11 | C12 | 120.5° | 125.2° |
C06 | C05 | C11 | 112.2° | 114.9° |
C06 | C05 | C01 | 123.2° | 122.6° |
C05 | C06 | H7 | 123.4° | 122.5° |
C05 | C11 | C12 | 128.5° | 125.2° |
C11 | C05 | C01 | 124.5° | 122.6° |
C11 | C12 | N15 | 113.5° | 109.5° |
C11 | C12 | H9 | 108.5° | 109.4° |
C11 | C12 | H10 | 108.5° | 109.5° |
C05 | C01 | H4 | 109.5° | 109.4° |
C05 | C01 | H5 | 109.4° | 109.5° |
C05 | C01 | H6 | 109.5° | 109.5° |
C12 | N15 | C17 | 124.6° | 120.0° |
N15 | C12 | H9 | 108.4° | 109.5° |
N15 | C12 | H10 | 108.4° | 109.5° |
C12 | N15 | H11 | 105.5° | 120.0° |
CL2 | C28 | C17 | 120.1° | 120.5° |
CL2 | C28 | C26 | 116.8° | 120.4° |
N15 | C17 | C28 | 124.2° | 120.3° |
N15 | C17 | C18 | 121.2° | 120.3° |
C17 | N15 | H11 | 105.6° | 120.0° |
C28 | C17 | C18 | 114.6° | 119.4° |
C17 | C28 | C26 | 123.0° | 119.1° |
C17 | C18 | N20 | 124.9° | 120.4° |
C17 | C18 | H12 | 117.5° | 119.8° |
C28 | C26 | O27 | 124.3° | 120.2° |
C28 | C26 | N21 | 114.2° | 119.5° |
O27 | C26 | N21 | 121.4° | 120.2° |
C26 | N21 | N20 | 125.3° | 120.5° |
C26 | N21 | C22 | 119.9° | 119.7° |
C18 | N20 | N21 | 117.9° | 121.1° |
N20 | C18 | H12 | 117.5° | 119.8° |
N20 | N21 | C22 | 114.8° | 119.8° |
N21 | C22 | H1 | 109.5° | 109.5° |
N21 | C22 | H2 | 109.5° | 109.4° |
N21 | C22 | H3 | 109.5° | 109.4° |
H1 | C22 | H2 | 109.5° | 109.5° |
H1 | C22 | H3 | 109.5° | 109.5° |
H2 | C22 | H3 | 109.4° | 109.4° |
H4 | C01 | H5 | 109.5° | 109.5° |
H4 | C01 | H6 | 109.5° | 109.4° |
H5 | C01 | H6 | 109.5° | 109.5° |
H9 | C12 | H10 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
S10 | C08 | C06 | H8 | 180.0° | 179.8° |
S10 | C08 | C06 | C05 | 0.2° | 0.0° |
C08 | S10 | C11 | C05 | 0.2° | 0.3° |
C08 | S10 | C11 | C12 | 179.6° | 180.0° |
S10 | C08 | C06 | H7 | 179.9° | 180.0° |
C06 | C08 | S10 | C11 | 0.2° | 0.2° |
C08 | C06 | C05 | H7 | 180.0° | 180.0° |
C08 | C06 | C05 | C11 | 0.0° | 0.3° |
C08 | C06 | C05 | C01 | 179.1° | 179.9° |
S10 | C11 | C05 | C06 | 0.1° | 0.4° |
S10 | C11 | C05 | C12 | 179.3° | 179.7° |
S10 | C11 | C05 | C01 | 179.0° | 179.9° |
S10 | C11 | C12 | N15 | 55.6° | 90.0° |
C11 | S10 | C08 | H8 | 179.8° | 179.9° |
S10 | C11 | C12 | H9 | 176.2° | 30.0° |
S10 | C11 | C12 | H10 | 65.0° | 150.0° |
C06 | C05 | C11 | C01 | 179.1° | 179.7° |
C06 | C05 | C11 | C12 | 179.4° | 179.9° |
C06 | C05 | C01 | H4 | 89.5° | 90.0° |
C06 | C05 | C01 | H5 | 150.5° | 150.0° |
C06 | C05 | C01 | H6 | 30.5° | 29.9° |
C05 | C06 | C08 | H8 | 179.9° | 179.8° |
C05 | C11 | C12 | N15 | 125.2° | 89.6° |
C11 | C05 | C01 | H4 | 89.5° | 90.3° |
C11 | C05 | C01 | H5 | 30.5° | 29.7° |
C11 | C05 | C01 | H6 | 150.5° | 149.7° |
C11 | C05 | C06 | H7 | 180.0° | 179.8° |
C05 | C11 | C12 | H9 | 4.6° | 150.4° |
C05 | C11 | C12 | H10 | 114.3° | 30.4° |
C12 | C11 | C05 | C01 | 0.3° | 0.3° |
C11 | C12 | N15 | H9 | 120.6° | 120.0° |
C11 | C12 | N15 | H10 | 120.6° | 120.0° |
C11 | C12 | N15 | C17 | 56.9° | 180.0° |
C11 | C12 | H9 | H10 | 118.2° | 120.0° |
C11 | C12 | N15 | H11 | 179.0° | 0.1° |
C05 | C01 | H4 | H5 | 120.0° | 120.0° |
C05 | C01 | H4 | H6 | 120.0° | 120.0° |
C05 | C01 | H5 | H6 | 120.0° | 120.1° |
C01 | C05 | C06 | H7 | 0.9° | 0.1° |
C12 | N15 | C17 | H11 | 122.1° | 179.9° |
C12 | N15 | C17 | C28 | 156.4° | 180.0° |
C12 | N15 | C17 | C18 | 25.0° | 0.2° |
N15 | C12 | H9 | H10 | 118.1° | 120.0° |
CL2 | C28 | C17 | N15 | 2.1° | 0.2° |
CL2 | C28 | C17 | C26 | 174.9° | 180.0° |
CL2 | C28 | C17 | C18 | 179.2° | 180.0° |
CL2 | C28 | C26 | O27 | 2.0° | 0.0° |
CL2 | C28 | C26 | N21 | 178.6° | 180.0° |
N15 | C17 | C28 | C18 | 178.7° | 179.8° |
N15 | C17 | C28 | C26 | 177.0° | 179.8° |
N15 | C17 | C18 | N20 | 178.5° | 179.7° |
C17 | N15 | C12 | H9 | 63.7° | 60.0° |
C17 | N15 | C12 | H10 | 177.5° | 59.9° |
N15 | C17 | C18 | H12 | 1.6° | 0.2° |
C17 | C28 | C26 | O27 | 177.1° | 180.0° |
C17 | C28 | C26 | N21 | 3.5° | 0.0° |
C28 | C17 | C18 | N20 | 2.7° | 0.0° |
C28 | C17 | N15 | H11 | 81.6° | 0.0° |
C28 | C17 | C18 | H12 | 177.2° | 180.0° |
C18 | C17 | C28 | C26 | 4.2° | 0.0° |
C17 | C18 | N20 | H12 | 180.0° | 180.0° |
C17 | C18 | N20 | N21 | 0.5° | 0.0° |
C18 | C17 | N15 | H11 | 97.1° | 179.7° |
C28 | C26 | O27 | N21 | 179.4° | 180.0° |
C28 | C26 | N21 | N20 | 1.1° | 0.0° |
C28 | C26 | N21 | C22 | 179.7° | 180.0° |
O27 | C26 | N21 | N20 | 179.5° | 180.0° |
O27 | C26 | N21 | C22 | 0.8° | 0.0° |
C26 | N21 | N20 | C18 | 0.4° | 0.0° |
C26 | N21 | N20 | C22 | 178.7° | 180.0° |
C26 | N21 | C22 | H1 | 178.8° | 90.0° |
C26 | N21 | C22 | H2 | 61.2° | 150.0° |
C26 | N21 | C22 | H3 | 58.8° | 30.0° |
C18 | N20 | N21 | C22 | 178.4° | 180.0° |
N20 | N21 | C22 | H1 | 0.0° | 90.0° |
N20 | N21 | C22 | H2 | 120.0° | 30.1° |
N20 | N21 | C22 | H3 | 120.0° | 150.0° |
N21 | N20 | C18 | H12 | 179.5° | 180.0° |
N21 | C22 | H1 | H2 | 120.0° | 120.0° |
N21 | C22 | H1 | H3 | 120.0° | 120.0° |
N21 | C22 | H2 | H3 | 120.0° | 119.9° |
H1 | C22 | H2 | H3 | 120.0° | 120.0° |
H4 | C01 | H5 | H6 | 120.0° | 120.0° |
H7 | C06 | C08 | H8 | 0.1° | 0.2° |
H9 | C12 | N15 | H11 | 58.4° | 120.0° |
H10 | C12 | N15 | H11 | 60.4° | 120.0° |