RN8
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C6 | C4 | doub | 1.38Å | 1.40Å | Aromatic |
C11 | C4 | sing | 1.40Å | 1.41Å | Aromatic |
C4 | H4 | sing | 1.08Å | 1.08Å | |
C12 | C5 | doub | 1.40Å | 1.41Å | Aromatic |
C5 | C3 | sing | 1.38Å | 1.41Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C12 | C6 | sing | 1.40Å | 1.41Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C13 | C7 | sing | 1.51Å | 1.50Å | |
C7 | C1 | sing | 1.53Å | 1.54Å | |
C7 | H7 | sing | 1.09Å | 1.10Å | |
C7 | H7A | sing | 1.09Å | 1.10Å | |
C14 | C8 | sing | 1.51Å | 1.51Å | |
C8 | C2 | sing | 1.53Å | 1.52Å | |
C8 | H8 | sing | 1.09Å | 1.10Å | |
C8 | H8A | sing | 1.09Å | 1.10Å | |
C16 | C10 | sing | 1.43Å | 1.42Å | |
C10 | N24 | trip | 1.14Å | 1.15Å | |
S29 | C13 | sing | 1.70Å | 1.68Å | Aromatic |
C15 | C13 | doub | 1.36Å | 1.37Å | Aromatic |
C17 | C15 | sing | 1.44Å | 1.47Å | Aromatic |
C15 | C9 | sing | 1.43Å | 1.43Å | |
C19 | C17 | doub | 1.37Å | 1.37Å | Aromatic |
C11 | C17 | sing | 1.48Å | 1.46Å | Aromatic |
C22 | C20 | sing | 1.46Å | 1.54Å | |
C20 | S30 | sing | 1.75Å | 1.72Å | Aromatic |
C20 | C18 | doub | 1.37Å | 1.37Å | Aromatic |
O27 | C21 | doub | 1.22Å | 1.26Å | |
O25 | C21 | sing | 1.35Å | 1.28Å | |
C21 | C19 | sing | 1.46Å | 1.55Å | |
O28 | C22 | doub | 1.22Å | 1.27Å | |
O26 | C22 | sing | 1.35Å | 1.28Å | |
O26 | HO26 | sing | 0.97Å | 0.95Å | |
S30 | C14 | sing | 1.70Å | 1.70Å | Aromatic |
C16 | C14 | doub | 1.36Å | 1.37Å | Aromatic |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C2 | H2A | sing | 1.09Å | 1.10Å | |
C2 | H2B | sing | 1.09Å | 1.10Å | |
C12 | C18 | sing | 1.48Å | 1.47Å | Aromatic |
C18 | C16 | sing | 1.44Å | 1.47Å | Aromatic |
C3 | C11 | doub | 1.40Å | 1.41Å | Aromatic |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C9 | N23 | trip | 1.14Å | 1.15Å | |
C19 | S29 | sing | 1.75Å | 1.73Å | Aromatic |
O25 | HO25 | sing | 0.97Å | 0.95Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C1 | H1A | sing | 1.09Å | 1.10Å | |
C1 | H1B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C6 | C4 | C11 | 121.9° | 120.0° |
C6 | C4 | H4 | 119.0° | 120.0° |
C4 | C6 | C12 | 119.3° | 120.0° |
C4 | C6 | H6 | 120.3° | 120.0° |
C11 | C4 | H4 | 119.1° | 120.0° |
C4 | C11 | C17 | 111.8° | 120.0° |
C4 | C11 | C3 | 119.3° | 120.0° |
C12 | C5 | C3 | 121.3° | 120.0° |
C12 | C5 | H5 | 119.4° | 120.0° |
C5 | C12 | C6 | 119.3° | 120.0° |
C5 | C12 | C18 | 117.3° | 120.0° |
C3 | C5 | H5 | 119.4° | 120.0° |
C5 | C3 | C11 | 118.8° | 120.0° |
C5 | C3 | H3 | 120.6° | 120.0° |
C12 | C6 | H6 | 120.3° | 120.0° |
C6 | C12 | C18 | 122.6° | 120.0° |
C13 | C7 | C1 | 112.9° | 109.5° |
C13 | C7 | H7 | 108.4° | 109.5° |
C13 | C7 | H7A | 108.4° | 109.4° |
C7 | C13 | S29 | 120.6° | 124.2° |
C7 | C13 | C15 | 129.8° | 124.2° |
C1 | C7 | H7 | 108.4° | 109.5° |
C1 | C7 | H7A | 108.3° | 109.5° |
C7 | C1 | H1 | 109.5° | 109.5° |
C7 | C1 | H1A | 109.5° | 109.5° |
C7 | C1 | H1B | 109.5° | 109.5° |
H7 | C7 | H7A | 110.6° | 109.5° |
C14 | C8 | C2 | 110.8° | 109.4° |
C14 | C8 | H8 | 109.0° | 109.4° |
C14 | C8 | H8A | 109.0° | 109.5° |
C8 | C14 | S30 | 122.9° | 124.2° |
C8 | C14 | C16 | 126.9° | 124.2° |
C2 | C8 | H8 | 109.0° | 109.4° |
C2 | C8 | H8A | 109.0° | 109.5° |
C8 | C2 | H2 | 109.5° | 109.5° |
C8 | C2 | H2A | 109.4° | 109.4° |
C8 | C2 | H2B | 109.5° | 109.4° |
H8 | C8 | H8A | 109.9° | 109.5° |
C16 | C10 | N24 | 175.2° | 180.0° |
C10 | C16 | C14 | 118.6° | 123.3° |
C10 | C16 | C18 | 125.6° | 123.3° |
S29 | C13 | C15 | 109.6° | 111.6° |
C13 | S29 | C19 | 93.8° | 92.8° |
C13 | C15 | C17 | 116.1° | 113.3° |
C13 | C15 | C9 | 117.4° | 123.3° |
C17 | C15 | C9 | 126.4° | 123.3° |
C15 | C17 | C19 | 107.5° | 112.2° |
C15 | C17 | C11 | 118.7° | 123.9° |
C15 | C9 | N23 | 179.4° | 180.0° |
C19 | C17 | C11 | 132.7° | 123.9° |
C17 | C19 | C21 | 127.9° | 125.0° |
C17 | C19 | S29 | 112.9° | 110.1° |
C17 | C11 | C3 | 128.2° | 120.0° |
C22 | C20 | S30 | 117.2° | 125.0° |
C22 | C20 | C18 | 128.2° | 124.9° |
C20 | C22 | O28 | 114.0° | 120.0° |
C20 | C22 | O26 | 114.6° | 120.0° |
S30 | C20 | C18 | 114.5° | 110.1° |
C20 | S30 | C14 | 92.2° | 92.8° |
C20 | C18 | C12 | 133.8° | 123.9° |
C20 | C18 | C16 | 107.2° | 112.2° |
O27 | C21 | O25 | 128.7° | 120.0° |
O27 | C21 | C19 | 115.4° | 120.0° |
O25 | C21 | C19 | 115.6° | 120.0° |
C21 | O25 | HO25 | 109.5° | 114.0° |
C21 | C19 | S29 | 118.9° | 124.9° |
O28 | C22 | O26 | 131.3° | 120.0° |
C22 | O26 | HO26 | 109.5° | 114.0° |
S30 | C14 | C16 | 110.2° | 111.6° |
C14 | C16 | C18 | 115.6° | 113.4° |
H2 | C2 | H2A | 109.5° | 109.5° |
H2 | C2 | H2B | 109.4° | 109.4° |
H2A | C2 | H2B | 109.5° | 109.5° |
C12 | C18 | C16 | 118.0° | 123.9° |
C11 | C3 | H3 | 120.6° | 120.0° |
H1 | C1 | H1A | 109.4° | 109.4° |
H1 | C1 | H1B | 109.5° | 109.5° |
H1A | C1 | H1B | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C6 | C4 | C11 | H4 | 180.0° | 179.8° |
C4 | C6 | C12 | C5 | 4.4° | 0.0° |
C4 | C6 | C12 | H6 | 180.0° | 180.0° |
C6 | C4 | C11 | C17 | 173.5° | 179.8° |
C4 | C6 | C12 | C18 | 173.8° | 180.0° |
C6 | C4 | C11 | C3 | 2.8° | 0.3° |
C4 | C11 | C3 | C5 | 4.1° | 0.0° |
C11 | C4 | C6 | C12 | 1.5° | 0.2° |
C11 | C4 | C6 | H6 | 178.5° | 179.7° |
C4 | C11 | C17 | C15 | 107.6° | 115.0° |
C4 | C11 | C17 | C19 | 58.6° | 65.0° |
C4 | C11 | C17 | C3 | 169.7° | 180.0° |
C4 | C11 | C3 | H3 | 175.9° | 179.7° |
H4 | C4 | C6 | C12 | 178.5° | 180.0° |
H4 | C4 | C6 | H6 | 1.5° | 0.0° |
H4 | C4 | C11 | C17 | 6.5° | 0.0° |
H4 | C4 | C11 | C3 | 177.2° | 180.0° |
C12 | C5 | C3 | H5 | 180.0° | 179.7° |
C5 | C12 | C6 | C18 | 169.5° | 180.0° |
C5 | C12 | C6 | H6 | 175.6° | 180.0° |
C5 | C12 | C18 | C20 | 50.9° | 65.0° |
C5 | C12 | C18 | C16 | 116.0° | 115.0° |
C12 | C5 | C3 | C11 | 1.2° | 0.3° |
C12 | C5 | C3 | H3 | 178.8° | 180.0° |
C3 | C5 | C12 | C6 | 3.1° | 0.3° |
C5 | C3 | C11 | C17 | 173.1° | 180.0° |
C3 | C5 | C12 | C18 | 173.1° | 179.7° |
C5 | C3 | C11 | H3 | 180.0° | 179.7° |
H5 | C5 | C12 | C6 | 176.9° | 180.0° |
H5 | C5 | C12 | C18 | 6.9° | 0.0° |
H5 | C5 | C3 | C11 | 178.8° | 180.0° |
H5 | C5 | C3 | H3 | 1.2° | 0.3° |
C6 | C12 | C18 | C20 | 139.5° | 115.0° |
C6 | C12 | C18 | C16 | 53.7° | 65.0° |
H6 | C6 | C12 | C18 | 6.2° | 0.0° |
C13 | C7 | C1 | H7 | 120.0° | 120.0° |
C13 | C7 | C1 | H7A | 120.0° | 120.0° |
C13 | C7 | H7 | H7A | 118.6° | 119.9° |
C7 | C13 | S29 | C15 | 179.1° | 179.7° |
C7 | C13 | C15 | C17 | 178.1° | 180.0° |
C7 | C13 | C15 | C9 | 0.9° | 0.0° |
C7 | C13 | S29 | C19 | 180.0° | 179.9° |
C13 | C7 | C1 | H1 | 180.0° | 180.0° |
C13 | C7 | C1 | H1A | 60.0° | 60.0° |
C13 | C7 | C1 | H1B | 60.0° | 60.0° |
C1 | C7 | H7 | H7A | 118.6° | 120.1° |
C1 | C7 | C13 | S29 | 40.2° | 90.3° |
C1 | C7 | C13 | C15 | 138.7° | 90.0° |
C7 | C1 | H1 | H1A | 120.0° | 120.0° |
C7 | C1 | H1 | H1B | 120.0° | 120.0° |
C7 | C1 | H1A | H1B | 120.0° | 120.0° |
H7 | C7 | C13 | S29 | 79.8° | 29.7° |
H7 | C7 | C13 | C15 | 101.3° | 150.0° |
H7 | C7 | C1 | H1 | 60.0° | 60.0° |
H7 | C7 | C1 | H1A | 180.0° | 180.0° |
H7 | C7 | C1 | H1B | 60.0° | 60.0° |
H7A | C7 | C13 | S29 | 160.2° | 149.7° |
H7A | C7 | C13 | C15 | 18.7° | 30.0° |
H7A | C7 | C1 | H1 | 60.0° | 60.0° |
H7A | C7 | C1 | H1A | 60.0° | 60.0° |
H7A | C7 | C1 | H1B | 180.0° | 179.9° |
C14 | C8 | C2 | H8 | 120.0° | 119.9° |
C14 | C8 | C2 | H8A | 120.0° | 120.1° |
C14 | C8 | H8 | H8A | 119.4° | 120.1° |
C8 | C14 | C16 | C10 | 0.9° | 0.0° |
C8 | C14 | S30 | C20 | 179.6° | 180.0° |
C8 | C14 | S30 | C16 | 179.5° | 179.9° |
C14 | C8 | C2 | H2 | 180.0° | 59.9° |
C14 | C8 | C2 | H2A | 60.0° | 180.0° |
C14 | C8 | C2 | H2B | 60.0° | 60.0° |
C8 | C14 | C16 | C18 | 177.1° | 180.0° |
C2 | C8 | H8 | H8A | 119.5° | 120.0° |
C2 | C8 | C14 | S30 | 89.5° | 90.0° |
C2 | C8 | C14 | C16 | 91.0° | 90.1° |
C8 | C2 | H2 | H2A | 120.0° | 120.0° |
C8 | C2 | H2 | H2B | 120.0° | 120.0° |
C8 | C2 | H2A | H2B | 120.0° | 120.0° |
H8 | C8 | C14 | S30 | 30.5° | 29.9° |
H8 | C8 | C14 | C16 | 148.9° | 150.0° |
H8 | C8 | C2 | H2 | 60.0° | 60.0° |
H8 | C8 | C2 | H2A | 180.0° | 60.1° |
H8 | C8 | C2 | H2B | 60.0° | 179.9° |
H8A | C8 | C14 | S30 | 150.5° | 150.0° |
H8A | C8 | C14 | C16 | 28.9° | 30.0° |
H8A | C8 | C2 | H2 | 60.0° | 180.0° |
H8A | C8 | C2 | H2A | 60.0° | 60.0° |
H8A | C8 | C2 | H2B | 180.0° | 60.0° |
C10 | C16 | C18 | C20 | 179.9° | 180.0° |
C10 | C16 | C14 | S30 | 178.6° | 180.0° |
C10 | C16 | C14 | C18 | 176.2° | 180.0° |
C10 | C16 | C18 | C12 | 9.8° | 0.0° |
N24 | C10 | C16 | C14 | 112.8° | 178.9° |
N24 | C10 | C16 | C18 | 62.9° | 1.0° |
S29 | C13 | C15 | C17 | 2.9° | 0.2° |
S29 | C13 | C15 | C9 | 178.2° | 179.7° |
C13 | S29 | C19 | C17 | 1.4° | 0.3° |
C13 | S29 | C19 | C21 | 176.5° | 179.9° |
C13 | C15 | C17 | C9 | 178.9° | 180.0° |
C13 | C15 | C17 | C19 | 3.8° | 0.0° |
C13 | C15 | C17 | C11 | 173.2° | 180.0° |
C13 | C15 | C9 | N23 | 59.7° | 130.1° |
C15 | C13 | S29 | C19 | 0.9° | 0.3° |
C15 | C17 | C19 | C11 | 167.4° | 180.0° |
C15 | C17 | C19 | C21 | 177.5° | 180.0° |
C15 | C17 | C11 | C3 | 62.0° | 65.0° |
C17 | C15 | C9 | N23 | 121.4° | 50.0° |
C15 | C17 | C19 | S29 | 2.9° | 0.3° |
C9 | C15 | C17 | C19 | 177.3° | 180.0° |
C9 | C15 | C17 | C11 | 7.9° | 0.0° |
C17 | C19 | C21 | O27 | 12.0° | 0.0° |
C17 | C19 | C21 | O25 | 174.1° | 180.0° |
C17 | C19 | C21 | S29 | 174.3° | 179.7° |
C19 | C17 | C11 | C3 | 131.7° | 115.1° |
C11 | C17 | C19 | C21 | 15.1° | 0.0° |
C17 | C11 | C3 | H3 | 6.9° | 0.2° |
C11 | C17 | C19 | S29 | 170.3° | 179.7° |
C22 | C20 | S30 | C18 | 176.6° | 179.7° |
C20 | C22 | O28 | O26 | 177.4° | 180.0° |
C20 | C22 | O26 | HO26 | 177.4° | 180.0° |
C22 | C20 | S30 | C14 | 179.3° | 179.7° |
C22 | C20 | C18 | C12 | 11.8° | 0.3° |
C22 | C20 | C18 | C16 | 179.7° | 179.7° |
S30 | C20 | C22 | O28 | 137.3° | 180.0° |
S30 | C20 | C22 | O26 | 40.6° | 0.1° |
C20 | S30 | C14 | C16 | 0.0° | 0.0° |
S30 | C20 | C18 | C12 | 172.0° | 180.0° |
S30 | C20 | C18 | C16 | 4.2° | 0.0° |
C18 | C20 | C22 | O28 | 38.8° | 0.3° |
C18 | C20 | C22 | O26 | 143.4° | 179.7° |
C18 | C20 | S30 | C14 | 2.6° | 0.0° |
C20 | C18 | C16 | C14 | 4.2° | 0.0° |
C20 | C18 | C12 | C16 | 166.8° | 180.0° |
O27 | C21 | O25 | C19 | 173.0° | 180.0° |
O27 | C21 | C19 | S29 | 162.3° | 179.7° |
O27 | C21 | O25 | HO25 | 0.0° | 0.1° |
O25 | C21 | C19 | S29 | 11.6° | 0.3° |
C19 | C21 | O25 | HO25 | 173.0° | 180.0° |
O28 | C22 | O26 | HO26 | 0.0° | 0.0° |
S30 | C14 | C16 | C18 | 2.4° | 0.0° |
C14 | C16 | C18 | C12 | 174.3° | 180.0° |
H2 | C2 | H2A | H2B | 120.0° | 120.0° |
H1 | C1 | H1A | H1B | 120.0° | 119.9° |