Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

RM8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.49Å
N1C2sing1.37Å1.37ÅAromatic
N1C9sing1.38Å1.37ÅAromatic
C2C3doub1.34Å1.39ÅAromatic
N2C10sing1.47Å1.52Å
N2C11sing1.47Å1.52Å
N2C14sing1.47Å1.52Å
C3C4sing1.46Å1.43ÅAromatic
C3C10sing1.51Å1.49Å
N3C12sing1.47Å1.47Å
N3C13sing1.47Å1.47Å
N3C15sing1.39Å1.41Å
C4C5doub1.40Å1.42ÅAromatic
C4C9sing1.41Å1.40ÅAromatic
N4C15doub1.32Å1.37ÅAromatic
N4C19sing1.32Å1.36ÅAromatic
C5C6sing1.37Å1.40ÅAromatic
C6C7doub1.39Å1.40ÅAromatic
C7C8sing1.38Å1.40ÅAromatic
C8C9doub1.39Å1.41ÅAromatic
C11C12sing1.53Å1.52Å
C13C14sing1.53Å1.53Å
C15C16sing1.39Å1.41ÅAromatic
C16C17doub1.38Å1.40ÅAromatic
C17C18sing1.39Å1.39ÅAromatic
C18C19doub1.38Å1.38ÅAromatic
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C1H1Bsing1.09Å1.10Å
N1HN1sing0.97Å1.00Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C16H16sing1.08Å1.08Å
C17H17sing1.08Å1.08Å
C18H18sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2N1121.2°125.0°
C1C2C3131.2°125.0°
C2C1H1109.5°109.5°
C2C1H1A109.4°109.5°
C2C1H1B109.5°109.4°
C2N1C9110.7°109.8°
N1C2C3107.6°110.0°
C2N1HN1124.6°125.1°
N1C9C4107.1°107.2°
N1C9C8130.4°133.5°
C9N1HN1124.7°125.1°
C2C3C4107.2°107.0°
C2C3C10126.9°126.5°
C10N2C11112.8°111.0°
C10N2C14113.7°111.0°
N2C10C3117.4°109.5°
N2C10H10106.9°109.5°
N2C10H10A106.9°109.5°
C11N2C14113.0°110.9°
N2C11C12109.5°109.4°
N2C11H11109.5°109.5°
N2C11H11A109.4°109.5°
N2C14C13110.1°109.3°
N2C14H14109.3°109.5°
N2C14H14A109.3°109.5°
C4C3C10125.9°126.6°
C3C4C5134.2°134.0°
C3C4C9107.3°106.0°
C3C10H10106.9°109.5°
C3C10H10A106.9°109.4°
C12N3C13116.8°110.9°
C12N3C15117.2°111.0°
N3C12C11110.5°109.4°
N3C12H12109.1°109.5°
N3C12H12A109.1°109.5°
C13N3C15119.8°111.0°
N3C13C14110.4°109.4°
N3C13H13109.1°109.5°
N3C13H13A109.2°109.5°
N3C15N4120.3°119.7°
N3C15C16120.9°119.7°
C5C4C9118.5°119.9°
C4C5C6119.6°119.8°
C4C5H5120.2°120.1°
C4C9C8122.5°119.3°
C15N4C19119.9°121.7°
N4C15C16118.8°120.5°
N4C19C18123.7°120.9°
N4C19H19118.2°119.6°
C5C6C7120.6°120.5°
C6C5H5120.2°120.1°
C5C6H6119.7°119.8°
C6C7C8120.8°120.7°
C7C6H6119.7°119.8°
C6C7H7119.6°119.6°
C7C8C9118.0°119.8°
C8C7H7119.6°119.7°
C7C8H8121.0°120.1°
C9C8H8121.0°120.1°
C12C11H11109.5°109.5°
C12C11H11A109.5°109.5°
C11C12H12109.1°109.5°
C11C12H12A109.1°109.5°
C14C13H13109.1°109.5°
C14C13H13A109.1°109.5°
C13C14H14109.3°109.5°
C13C14H14A109.3°109.5°
C15C16C17120.0°119.1°
C15C16H16120.0°120.4°
C16C17C18120.4°118.5°
C17C16H16120.0°120.5°
C16C17H17119.8°120.8°
C17C18C19117.2°119.3°
C18C17H17119.8°120.7°
C17C18H18121.4°120.3°
C19C18H18121.4°120.4°
C18C19H19118.2°119.5°
H1C1H1A109.5°109.5°
H1C1H1B109.5°109.5°
H1AC1H1B109.5°109.5°
H10C10H10A111.9°109.5°
H11C11H11A109.5°109.5°
H12C12H12A109.8°109.5°
H13C13H13A109.8°109.5°
H14C14H14A109.6°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2N1C3179.6°180.0°
C1C2N1C9179.9°180.0°
C1C2C3C4179.6°180.0°
C1C2C3C100.6°0.0°
C2C1H1H1A120.0°120.0°
C2C1H1H1B120.0°120.0°
C2C1H1AH1B120.0°120.0°
C1C2N1HN10.2°0.3°
C2N1C9HN1180.0°179.7°
N1C2C3C40.1°0.0°
N1C2C3C10179.9°180.0°
C2N1C9C40.3°0.0°
C2N1C9C8179.9°180.0°
N1C2C1H189.8°90.0°
N1C2C1H1A150.2°149.9°
N1C2C1H1B30.2°29.9°
C9N1C2C30.3°0.0°
N1C9C4C30.3°0.0°
N1C9C4C5179.7°180.0°
N1C9C4C8179.8°180.0°
N1C9C8C7179.9°180.0°
N1C9C8H80.1°0.1°
C2C3C10N289.3°90.0°
C2C3C4C10179.8°180.0°
C2C3C4C5179.4°179.9°
C2C3C4C90.1°0.0°
C3C2C1H189.7°90.0°
C3C2C1H1A30.3°30.0°
C3C2C1H1B150.3°150.0°
C3C2N1HN1179.8°179.7°
C2C3C10H1030.7°30.0°
C2C3C10H10A150.7°150.0°
C10N2C11C14130.8°123.8°
N2C10C3C490.9°90.0°
N2C10C3H10120.0°120.0°
N2C10C3H10A120.0°120.0°
C10N2C11C12172.9°176.8°
C10N2C14C13173.8°176.8°
N2C10H10H10A116.7°120.0°
C10N2C11H1167.1°63.2°
C10N2C11H11A52.9°56.8°
C10N2C14H1453.8°56.9°
C10N2C14H14A66.2°63.3°
C11N2C10C362.5°170.0°
N2C11C12N352.8°58.4°
N2C11C12H11120.0°119.9°
N2C11C12H11A120.0°119.9°
C11N2C14C1355.8°59.3°
C11N2C10H10177.5°50.0°
C11N2C10H10A57.5°70.0°
N2C11H11H11A120.0°120.0°
N2C11C12H1267.2°61.5°
N2C11C12H12A172.8°178.4°
C11N2C14H14175.8°179.3°
C11N2C14H14A64.2°60.6°
C14N2C10C368.0°66.2°
N2C14C13N351.6°58.4°
C14N2C11C1256.2°59.4°
N2C14C13H14120.0°120.0°
N2C14C13H14A120.0°119.9°
C14N2C10H1052.0°173.8°
C14N2C10H10A172.0°53.8°
C14N2C11H1163.8°60.6°
C14N2C11H11A176.2°179.3°
N2C14C13H13171.6°178.4°
N2C14C13H13A68.4°61.6°
N2C14H14H14A119.7°120.1°
C3C4C5C9179.3°179.9°
C3C4C5C6179.7°179.9°
C3C4C9C8180.0°180.0°
C3C4C5H50.2°0.1°
C4C3C10H10149.1°150.0°
C4C3C10H10A29.1°30.0°
C10C3C4C50.4°0.1°
C10C3C4C9179.7°180.0°
C3C10H10H10A116.8°120.0°
C12N3C13C15151.6°123.9°
C12N3C15N422.9°0.0°
N3C12C11H12120.0°119.9°
N3C12C11H12A120.0°120.0°
C12N3C13C1453.3°59.3°
C12N3C15C16157.1°179.9°
N3C12C11H1167.2°61.5°
N3C12C11H11A172.8°178.3°
N3C12H12H12A119.6°120.1°
C12N3C13H13173.3°179.3°
C12N3C13H13A66.6°60.7°
C13N3C15N4128.5°123.8°
C13N3C12C1154.2°59.3°
N3C13C14H13120.0°120.0°
N3C13C14H13A120.0°120.0°
C13N3C15C1651.4°56.1°
C13N3C12H1265.8°60.6°
C13N3C12H12A174.2°179.3°
N3C13H13H13A119.6°120.1°
N3C13C14H14171.7°178.4°
N3C13C14H14A68.4°61.5°
N3C15N4C16179.9°179.9°
N3C15N4C19179.9°180.0°
C15N3C12C11153.5°176.8°
C15N3C13C14155.1°176.8°
N3C15C16C17179.9°180.0°
C15N3C12H1286.5°63.3°
C15N3C12H12A33.5°56.8°
C15N3C13H1335.1°56.8°
C15N3C13H13A84.9°63.2°
N3C15C16H160.1°0.1°
C4C5C6H5180.0°180.0°
C4C5C6C70.4°0.0°
C5C4C9C80.5°0.1°
C4C5C6H6179.6°179.9°
C9C4C5C60.5°0.0°
C4C9C8C70.5°0.0°
C4C9N1HN1179.7°179.7°
C9C4C5H5179.5°180.0°
C4C9C8H8179.6°179.9°
N4C15C16C170.1°0.1°
C15N4C19C180.2°0.1°
N4C15C16H16179.9°180.0°
C15N4C19H19179.8°180.0°
C19N4C15C160.2°0.1°
N4C19C18C170.1°0.0°
N4C19C18H19180.0°180.0°
N4C19C18H18179.9°179.9°
C5C6C7H6180.0°179.9°
C5C6C7C80.3°0.0°
C5C6C7H7179.7°179.9°
C6C7C8H7180.0°180.0°
C6C7C8C90.3°0.0°
C7C6C5H5179.6°180.0°
C6C7C8H8179.7°180.0°
C7C8C9H8180.0°180.0°
C8C7C6H6179.7°180.0°
C8C9N1HN10.0°0.3°
C9C8C7H7179.7°180.0°
C12C11H11H11A120.0°120.1°
C11C12H12H12A119.6°120.1°
C14C13H13H13A119.6°120.0°
C13C14H14H14A119.8°120.0°
C15C16C17H16180.0°179.9°
C15C16C17C180.4°0.1°
C15C16C17H17179.6°180.0°
C16C17C18H17180.0°180.0°
C16C17C18C190.3°0.0°
C16C17C18H18179.7°179.9°
C17C18C19H18180.0°180.0°
C18C17C16H16179.6°180.0°
C17C18C19H19179.9°180.0°
C19C18C17H17179.7°180.0°
H1C1H1AH1B120.0°120.0°
H5C5C6H60.4°0.1°
H6C6C7H70.3°0.0°
H7C7C8H80.3°0.0°
H11C11C12H12172.8°178.5°
H11C11C12H12A52.8°58.4°
H11AC11C12H1252.8°58.4°
H11AC11C12H12A67.2°61.7°
H13C13C14H1468.3°61.7°
H13C13C14H14A51.6°58.4°
H13AC13C14H1451.7°58.3°
H13AC13C14H14A171.6°178.4°
H16C16C17H170.4°0.0°
H17C17C18H180.3°0.0°
H18C18C19H190.1°0.0°

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon