Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

RL2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O7doub1.21Å1.23Å
C1O6sing1.34Å1.34Å
C1C2sing1.51Å1.51Å
O6HO6sing0.97Å0.95Å
C2C3sing1.53Å1.54Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C3O8sing1.43Å1.43Å
C3C4sing1.51Å1.51Å
C3H31sing1.09Å1.10Å
O8HO8sing0.97Å0.95Å
C4O9doub1.21Å1.23Å
C4N5sing1.35Å1.37Å
N5C10sing1.46Å1.50Å
N5HN5sing0.97Å1.00Å
C10C12sing1.53Å1.54Å
C10C11sing1.51Å1.52Å
C10H101sing1.09Å1.10Å
C12C13sing1.53Å1.55Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C13C14sing1.51Å1.50Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C14C15doub1.38Å1.41ÅAromatic
C14C19sing1.38Å1.40ÅAromatic
C15C16sing1.38Å1.40ÅAromatic
C15H151sing1.08Å1.08Å
C16C17doub1.38Å1.40ÅAromatic
C16H161sing1.08Å1.08Å
C17C18sing1.38Å1.40ÅAromatic
C17H171sing1.08Å1.08Å
C18C19doub1.38Å1.40ÅAromatic
C18H181sing1.08Å1.08Å
C19H191sing1.08Å1.08Å
C11N20sing1.35Å1.37Å
C11O26doub1.21Å1.24Å
N20C21sing1.47Å1.48Å
N20H20sing0.97Å1.00Å
C21C22sing1.53Å1.54Å
C21H211sing1.09Å1.10Å
C21H212sing1.09Å1.10Å
C22C23sing1.53Å1.55Å
C22H221sing1.09Å1.10Å
C22H222sing1.09Å1.10Å
C23C25sing1.53Å1.53Å
C23C24sing1.53Å1.53Å
C23H231sing1.09Å1.10Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C25H253sing1.09Å1.10Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C24H243sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O7C1O6118.2°120.0°
O7C1C2123.9°120.0°
O6C1C2117.2°120.0°
C1O6HO6109.5°117.0°
C1C2C3108.8°109.5°
C1C2H21109.7°109.4°
C1C2H22109.7°109.5°
C3C2H21109.7°109.5°
C3C2H22109.7°109.5°
C2C3O8110.0°109.5°
C2C3C4113.5°109.5°
C2C3H31106.2°109.5°
H21C2H22109.2°109.5°
O8C3C4109.3°109.5°
O8C3H31110.7°109.5°
C3O8HO8109.5°113.9°
C4C3H31106.9°109.5°
C3C4O9120.3°120.0°
C3C4N5120.1°120.0°
O9C4N5119.6°120.0°
C4N5C10124.3°120.0°
C4N5HN5117.9°120.0°
C10N5HN5117.8°120.0°
N5C10C12109.7°109.4°
N5C10C11111.0°109.5°
N5C10H101108.4°109.5°
C12C10C11110.0°109.5°
C12C10H101109.6°109.4°
C10C12C13112.7°109.5°
C10C12H121108.4°109.5°
C10C12H122108.4°109.5°
C11C10H101108.2°109.5°
C10C11N20116.4°120.0°
C10C11O26121.6°120.0°
C13C12H121108.4°109.4°
C13C12H122108.4°109.5°
C12C13C14113.5°109.5°
C12C13H131108.2°109.4°
C12C13H132108.2°109.5°
H121C12H122110.5°109.5°
C14C13H131108.2°109.5°
C14C13H132108.2°109.5°
C13C14C15120.9°120.0°
C13C14C19119.1°120.0°
H131C13H132110.8°109.4°
C15C14C19119.5°120.0°
C14C15C16120.2°120.0°
C14C15H151119.9°120.0°
C14C19C18120.8°120.0°
C14C19H191119.6°120.0°
C16C15H151119.9°120.0°
C15C16C17119.9°120.0°
C15C16H161120.1°120.0°
C17C16H161120.0°120.0°
C16C17C18120.5°120.0°
C16C17H171119.7°120.0°
C18C17H171119.8°120.0°
C17C18C19119.1°120.0°
C17C18H181120.5°120.0°
C19C18H181120.5°120.0°
C18C19H191119.6°120.0°
N20C11O26120.9°120.0°
C11N20C21122.2°120.0°
C11N20H20118.9°120.0°
C21N20H20118.9°120.0°
N20C21C22111.6°109.5°
N20C21H211108.8°109.5°
N20C21H212108.8°109.5°
C22C21H211108.8°109.5°
C22C21H212108.8°109.4°
C21C22C23111.9°109.5°
C21C22H221108.7°109.5°
C21C22H222108.7°109.4°
H211C21H212110.2°109.5°
C23C22H221108.7°109.5°
C23C22H222108.7°109.5°
C22C23C25112.9°109.5°
C22C23C24110.5°109.5°
C22C23H231106.6°109.5°
H221C22H222110.3°109.5°
C25C23C24110.3°109.5°
C25C23H231106.8°109.5°
C23C25H251109.5°109.5°
C23C25H252109.5°109.5°
C23C25H253109.5°109.5°
C24C23H231109.5°109.4°
C23C24H241109.5°109.5°
C23C24H242109.4°109.5°
C23C24H243109.4°109.5°
H251C25H252109.5°109.5°
H251C25H253109.5°109.4°
H252C25H253109.5°109.4°
H241C24H242109.5°109.4°
H241C24H243109.4°109.5°
H242C24H243109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O7C1O6C2171.1°180.0°
O7C1O6HO60.0°0.0°
O7C1C2C358.7°0.0°
O7C1C2H2161.3°119.9°
O7C1C2H22178.7°120.1°
O6C1C2C3130.7°180.0°
O6C1C2H21109.3°60.0°
O6C1C2H2210.7°60.0°
C2C1O6HO6171.1°180.0°
C1C2C3H21120.0°120.0°
C1C2C3H22120.0°120.0°
C1C2H21H22120.3°120.0°
C1C2C3O862.4°65.0°
C1C2C3C4174.7°175.0°
C1C2C3H3157.4°55.0°
C3C2H21H22120.3°120.0°
C2C3O8C4125.3°120.0°
C2C3O8H31117.1°120.0°
C2C3C4H31116.8°120.0°
C2C3O8HO8180.0°60.0°
C2C3C4O991.2°115.0°
C2C3C4N586.3°64.7°
H21C2C3O8177.6°55.0°
H21C2C3C454.7°65.0°
H21C2C3H3162.6°174.9°
H22C2C3O857.6°175.0°
H22C2C3C465.3°55.0°
H22C2C3H31177.4°65.0°
O8C3C4H31119.9°120.0°
O8C3C4O9145.5°5.0°
O8C3C4N537.0°175.3°
C4C3O8HO854.7°60.0°
C3C4O9N5177.5°179.7°
C3C4N5C10173.6°179.7°
C3C4N5HN56.4°0.2°
H31C3O8HO862.9°180.0°
H31C3C4O925.6°125.0°
H31C3C4N5156.9°55.3°
O9C4N5C109.0°0.0°
O9C4N5HN5171.1°179.9°
C4N5C10HN5180.0°179.9°
C4N5C10C12158.2°85.0°
C4N5C10C1180.1°155.0°
C4N5C10H10138.6°34.9°
N5C10C12C11122.4°120.0°
N5C10C12H101118.9°120.0°
N5C10C11H101118.8°120.0°
N5C10C12C1361.8°65.0°
N5C10C12H12158.2°55.0°
N5C10C12H122178.2°175.0°
N5C10C11N20145.8°180.0°
N5C10C11O2646.5°0.0°
HN5N5C10C1221.9°95.1°
HN5N5C10C1199.8°24.9°
HN5N5C10H101141.5°145.0°
C12C10C11H101119.6°120.0°
C10C12C13H121120.0°120.0°
C10C12C13H122120.0°120.0°
C10C12H121H122118.7°120.0°
C10C12C13C1472.7°180.0°
C10C12C13H13147.3°60.0°
C10C12C13H132167.3°60.0°
C12C10C11N2092.6°60.0°
C12C10C11O2675.1°120.0°
C11C10C12C13175.8°175.0°
C11C10C12H12164.2°65.0°
C11C10C12H12255.8°55.0°
C10C11N20O26167.7°180.0°
C10C11N20C21169.0°180.0°
C10C11N20H2011.0°0.0°
H101C10C12C1357.1°55.0°
H101C10C12H121177.1°175.0°
H101C10C12H12263.0°65.0°
H101C10C11N2027.0°60.0°
H101C10C11O26165.3°120.0°
C13C12H121H122118.7°120.0°
C12C13C14H131120.0°119.9°
C12C13C14H132120.0°120.0°
C12C13H131H132118.4°119.9°
C12C13C14C1592.7°90.0°
C12C13C14C1978.5°90.3°
H121C12C13C14167.3°60.0°
H121C12C13H13172.7°180.0°
H121C12C13H13247.3°60.0°
H122C12C13C1447.3°59.9°
H122C12C13H131167.3°60.1°
H122C12C13H13272.7°180.0°
C14C13H131H132118.4°120.1°
C13C14C15C19171.2°179.7°
C13C14C15C16169.7°180.0°
C13C14C15H15110.3°0.0°
C13C14C19C18169.3°180.0°
C13C14C19H19110.7°0.1°
H131C13C14C1527.2°29.9°
H131C13C14C19161.5°149.7°
H132C13C14C15147.3°150.0°
H132C13C14C1941.5°29.7°
C14C15C16H151180.0°180.0°
C14C15C16C170.0°0.1°
C14C15C16H161180.0°180.0°
C15C14C19C182.1°0.3°
C15C14C19H191177.9°179.7°
C19C14C15C161.5°0.3°
C19C14C15H151178.5°179.7°
C14C19C18C171.1°0.0°
C14C19C18H191180.0°180.0°
C14C19C18H181178.9°180.0°
C15C16C17H161180.0°179.9°
C15C16C17C181.1°0.2°
C15C16C17H171179.0°180.0°
H151C15C16C17180.0°179.9°
H151C15C16H1610.0°0.0°
C16C17C18H171180.0°179.8°
C16C17C18C190.5°0.2°
C16C17C18H181179.5°179.7°
H161C16C17C18179.0°179.7°
H161C16C17H1711.0°0.1°
C17C18C19H181180.0°180.0°
C17C18C19H191178.9°180.0°
H171C17C18C19179.5°180.0°
H171C17C18H1810.5°0.1°
H181C18C19H1911.1°0.1°
C11N20C21H20180.0°180.0°
C11N20C21C22174.3°180.0°
C11N20C21H21154.3°60.0°
C11N20C21H21265.8°60.0°
O26C11N20C2123.3°0.0°
O26C11N20H20156.8°180.0°
N20C21C22H211120.0°120.0°
N20C21C22H212120.0°120.0°
N20C21H211H212119.2°120.0°
N20C21C22C23149.7°180.0°
N20C21C22H22129.7°59.9°
N20C21C22H22290.3°60.0°
H20N20C21C225.8°0.0°
H20N20C21H211125.8°120.0°
H20N20C21H212114.2°119.9°
C22C21H211H212119.1°120.0°
C21C22C23H221120.0°120.1°
C21C22C23H222120.0°119.9°
C21C22H221H222119.0°119.9°
C21C22C23C2554.4°65.0°
C21C22C23C24178.5°175.0°
C21C22C23H23162.6°55.1°
H211C21C22C2390.3°60.0°
H211C21C22H221149.7°180.0°
H211C21C22H22229.7°60.0°
H212C21C22C2329.7°60.1°
H212C21C22H22190.3°60.0°
H212C21C22H222149.7°180.0°
C23C22H221H222119.0°120.0°
C22C23C25C24124.2°120.0°
C22C23C25H231116.9°120.0°
C22C23C24H231117.2°120.0°
C22C23C25H251180.0°60.0°
C22C23C25H25260.0°180.0°
C22C23C25H25360.0°60.0°
C22C23C24H241180.0°60.0°
C22C23C24H24260.0°60.0°
C22C23C24H24360.0°179.9°
H221C22C23C25174.4°175.0°
H221C22C23C2461.5°55.0°
H221C22C23H23157.4°65.0°
H222C22C23C2565.6°55.0°
H222C22C23C2458.5°65.1°
H222C22C23H231177.4°175.0°
C25C23C24H231117.3°120.0°
C23C25H251H252120.0°120.0°
C23C25H251H253120.0°120.0°
C23C25H252H253120.0°120.0°
C25C23C24H24154.4°60.1°
C25C23C24H242174.4°180.0°
C25C23C24H24365.6°60.0°
C24C23C25H25155.8°60.0°
C24C23C25H25264.2°60.0°
C24C23C25H253175.8°180.0°
C23C24H241H242120.0°120.0°
C23C24H241H243119.9°120.1°
C23C24H242H243120.0°120.0°
H231C23C25H25163.1°180.0°
H231C23C25H252176.9°60.0°
H231C23C25H25356.9°60.0°
H231C23C24H24162.9°179.9°
H231C23C24H24257.1°60.0°
H231C23C24H243177.2°60.0°
H251C25H252H253120.0°120.0°
H241C24H242H243120.0°120.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon