RHC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O1 | sing | 1.43Å | 1.39Å | |
C1 | C2 | sing | 1.55Å | 1.52Å | |
C1 | O4 | sing | 1.44Å | 1.43Å | |
C1 | H1 | sing | 1.09Å | 1.11Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
C2 | O2 | sing | 1.43Å | 1.41Å | |
C2 | C3 | sing | 1.55Å | 1.53Å | |
C2 | H2 | sing | 1.09Å | 1.11Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C3 | O3 | sing | 1.43Å | 1.43Å | |
C3 | C4 | sing | 1.54Å | 1.52Å | |
C3 | H3 | sing | 1.09Å | 1.12Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.44Å | 1.45Å | |
C4 | C5 | sing | 1.53Å | 1.51Å | |
C4 | H4 | sing | 1.09Å | 1.12Å | |
C5 | SD | sing | 1.81Å | 1.74Å | |
C5 | H51 | sing | 1.09Å | 1.12Å | |
C5 | H52 | sing | 1.09Å | 1.11Å | |
N | CA | sing | 1.47Å | 1.46Å | |
N | HN1 | sing | 1.01Å | 1.02Å | |
N | HN2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | HCA1 | sing | 1.09Å | 1.12Å | |
CB | CG | sing | 1.53Å | 1.50Å | |
CB | HCB1 | sing | 1.09Å | 1.11Å | |
CB | HCB2 | sing | 1.09Å | 1.11Å | |
CG | SD | sing | 1.81Å | 1.79Å | |
CG | HCG1 | sing | 1.09Å | 1.12Å | |
CG | HCG2 | sing | 1.09Å | 1.12Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | OXT | sing | 1.34Å | 1.25Å | |
OXT | HOX1 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | C2 | 110.1° | 110.8° |
O1 | C1 | O4 | 108.9° | 110.6° |
O1 | C1 | H1 | 108.5° | 110.6° |
C1 | O1 | HO1 | 110.1° | 106.9° |
C2 | C1 | O4 | 106.5° | 103.5° |
C2 | C1 | H1 | 110.8° | 110.6° |
C1 | C2 | O2 | 109.1° | 110.9° |
C1 | C2 | C3 | 103.9° | 102.1° |
C1 | C2 | H2 | 114.2° | 110.9° |
O4 | C1 | H1 | 112.0° | 110.6° |
C1 | O4 | C4 | 109.6° | 106.9° |
O2 | C2 | C3 | 112.1° | 110.9° |
O2 | C2 | H2 | 106.3° | 110.8° |
C2 | O2 | HO2 | 109.1° | 106.9° |
C3 | C2 | H2 | 111.3° | 111.0° |
C2 | C3 | O3 | 113.1° | 110.5° |
C2 | C3 | C4 | 103.9° | 104.0° |
C2 | C3 | H3 | 110.7° | 110.5° |
O3 | C3 | C4 | 109.1° | 110.8° |
O3 | C3 | H3 | 105.6° | 110.4° |
C3 | O3 | HO3 | 113.1° | 106.8° |
C4 | C3 | H3 | 114.6° | 110.4° |
C3 | C4 | O4 | 108.0° | 107.5° |
C3 | C4 | C5 | 112.0° | 109.9° |
C3 | C4 | H4 | 108.3° | 109.8° |
O4 | C4 | C5 | 108.1° | 109.9° |
O4 | C4 | H4 | 112.3° | 109.9° |
C5 | C4 | H4 | 108.2° | 109.9° |
C4 | C5 | SD | 110.5° | 109.5° |
C4 | C5 | H51 | 111.9° | 109.5° |
C4 | C5 | H52 | 111.8° | 109.5° |
SD | C5 | H51 | 111.8° | 109.5° |
SD | C5 | H52 | 111.8° | 109.5° |
C5 | SD | CG | 101.1° | 100.1° |
H51 | C5 | H52 | 98.5° | 109.4° |
CA | N | HN1 | 110.2° | 106.7° |
CA | N | HN2 | 112.0° | 106.7° |
N | CA | CB | 110.1° | 109.5° |
N | CA | C | 113.9° | 109.4° |
N | CA | HCA1 | 105.7° | 109.4° |
HN1 | N | HN2 | 111.9° | 106.7° |
CB | CA | C | 108.8° | 109.5° |
CB | CA | HCA1 | 111.1° | 109.5° |
CA | CB | CG | 113.9° | 109.5° |
CA | CB | HCB1 | 110.6° | 109.4° |
CA | CB | HCB2 | 110.5° | 109.4° |
C | CA | HCA1 | 107.2° | 109.5° |
CA | C | O | 117.4° | 120.0° |
CA | C | OXT | 118.3° | 120.0° |
CG | CB | HCB1 | 110.6° | 109.5° |
CG | CB | HCB2 | 110.6° | 109.4° |
CB | CG | SD | 108.3° | 109.6° |
CB | CG | HCG1 | 112.6° | 109.5° |
CB | CG | HCG2 | 112.6° | 109.5° |
HCB1 | CB | HCB2 | 99.7° | 109.5° |
SD | CG | HCG1 | 112.7° | 109.5° |
SD | CG | HCG2 | 112.7° | 109.5° |
HCG1 | CG | HCG2 | 97.7° | 109.4° |
O | C | OXT | 124.3° | 120.0° |
C | OXT | HOX1 | 118.3° | 119.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | C2 | O4 | 118.0° | 118.6° |
O1 | C1 | C2 | H1 | 120.0° | 123.0° |
O1 | C1 | O4 | H1 | 120.0° | 122.8° |
O1 | C1 | C2 | O2 | 93.7° | 86.2° |
O1 | C1 | C2 | C3 | 146.5° | 155.6° |
O1 | C1 | C2 | H2 | 25.1° | 37.4° |
O1 | C1 | O4 | C4 | 139.3° | 158.7° |
C2 | C1 | O4 | H1 | 121.3° | 118.5° |
C2 | C1 | O1 | HO1 | 180.0° | 175.6° |
C1 | C2 | O2 | C3 | 114.6° | 112.7° |
C1 | C2 | O2 | H2 | 123.6° | 123.6° |
C1 | C2 | C3 | H2 | 123.4° | 118.2° |
C1 | C2 | O2 | HO2 | 180.0° | 61.4° |
C1 | C2 | C3 | O3 | 92.8° | 98.0° |
C1 | C2 | C3 | C4 | 25.3° | 21.0° |
C1 | C2 | C3 | H3 | 148.8° | 139.6° |
C2 | C1 | O4 | C4 | 20.5° | 40.0° |
O4 | C1 | O1 | HO1 | 63.5° | 61.4° |
O4 | C1 | C2 | O2 | 148.3° | 155.3° |
O4 | C1 | C2 | C3 | 28.6° | 37.1° |
O4 | C1 | C2 | H2 | 92.9° | 81.2° |
C1 | O4 | C4 | C3 | 4.0° | 26.4° |
C1 | O4 | C4 | C5 | 125.3° | 145.9° |
C1 | O4 | C4 | H4 | 115.4° | 93.1° |
H1 | C1 | O1 | HO1 | 58.6° | 61.4° |
H1 | C1 | C2 | O2 | 26.3° | 36.8° |
H1 | C1 | C2 | C3 | 93.4° | 81.4° |
H1 | C1 | C2 | H2 | 145.1° | 160.4° |
H1 | C1 | O4 | C4 | 100.7° | 78.5° |
O2 | C2 | C3 | H2 | 118.9° | 123.6° |
O2 | C2 | C3 | O3 | 24.9° | 20.2° |
O2 | C2 | C3 | C4 | 143.0° | 139.2° |
O2 | C2 | C3 | H3 | 93.5° | 102.3° |
C3 | C2 | O2 | HO2 | 65.4° | 174.2° |
C2 | C3 | O3 | C4 | 115.0° | 114.8° |
C2 | C3 | O3 | H3 | 121.3° | 122.6° |
C2 | C3 | C4 | H3 | 120.9° | 118.6° |
C2 | C3 | O3 | HO3 | 180.0° | 61.4° |
C2 | C3 | C4 | O4 | 13.9° | 1.9° |
C2 | C3 | C4 | C5 | 105.0° | 121.5° |
C2 | C3 | C4 | H4 | 135.7° | 117.6° |
H2 | C2 | O2 | HO2 | 56.4° | 62.2° |
H2 | C2 | C3 | O3 | 143.8° | 143.8° |
H2 | C2 | C3 | C4 | 98.1° | 97.2° |
H2 | C2 | C3 | H3 | 25.5° | 21.3° |
O3 | C3 | C4 | H3 | 118.2° | 122.7° |
O3 | C3 | C4 | O4 | 107.0° | 120.6° |
O3 | C3 | C4 | C5 | 134.1° | 119.8° |
O3 | C3 | C4 | H4 | 14.8° | 1.2° |
C4 | C3 | O3 | HO3 | 65.0° | 176.1° |
C3 | C4 | O4 | C5 | 121.4° | 119.6° |
C3 | C4 | O4 | H4 | 119.4° | 119.4° |
C3 | C4 | C5 | H4 | 119.4° | 121.0° |
C3 | C4 | C5 | SD | 157.4° | 179.7° |
C3 | C4 | C5 | H51 | 32.2° | 59.7° |
C3 | C4 | C5 | H52 | 77.3° | 60.2° |
H3 | C3 | O3 | HO3 | 58.7° | 61.2° |
H3 | C3 | C4 | O4 | 134.8° | 116.7° |
H3 | C3 | C4 | C5 | 16.0° | 2.8° |
H3 | C3 | C4 | H4 | 103.3° | 123.8° |
O4 | C4 | C5 | H4 | 121.8° | 121.0° |
O4 | C4 | C5 | SD | 83.8° | 61.7° |
O4 | C4 | C5 | H51 | 151.0° | 58.3° |
O4 | C4 | C5 | H52 | 41.5° | 178.3° |
C4 | C5 | SD | H51 | 125.3° | 120.0° |
C4 | C5 | SD | H52 | 125.3° | 120.0° |
C4 | C5 | H51 | H52 | 117.7° | 120.0° |
C4 | C5 | SD | CG | 140.3° | 180.0° |
H4 | C4 | C5 | SD | 38.1° | 59.3° |
H4 | C4 | C5 | H51 | 87.2° | 179.3° |
H4 | C4 | C5 | H52 | 163.4° | 60.7° |
SD | C5 | H51 | H52 | 117.7° | 120.0° |
C5 | SD | CG | CB | 48.3° | 180.0° |
C5 | SD | CG | HCG1 | 76.9° | 60.0° |
C5 | SD | CG | HCG2 | 173.6° | 59.9° |
H51 | C5 | SD | CG | 15.0° | 60.0° |
H52 | C5 | SD | CG | 94.4° | 60.0° |
CA | N | HN1 | HN2 | 125.3° | 113.8° |
N | CA | CB | C | 125.4° | 120.0° |
N | CA | CB | HCA1 | 116.8° | 120.0° |
N | CA | C | HCA1 | 116.5° | 119.9° |
N | CA | CB | CG | 51.8° | 60.0° |
N | CA | CB | HCB1 | 177.1° | 60.0° |
N | CA | CB | HCB2 | 73.4° | 180.0° |
N | CA | C | O | 173.7° | 30.0° |
N | CA | C | OXT | 6.9° | 150.0° |
HN1 | N | CA | CB | 180.0° | 60.0° |
HN1 | N | CA | C | 57.5° | 60.0° |
HN1 | N | CA | HCA1 | 59.9° | 180.0° |
HN2 | N | CA | CB | 54.8° | 53.7° |
HN2 | N | CA | C | 177.2° | 173.8° |
HN2 | N | CA | HCA1 | 65.4° | 66.3° |
CB | CA | C | HCA1 | 120.3° | 120.0° |
CA | CB | CG | HCB1 | 125.3° | 120.0° |
CA | CB | CG | HCB2 | 125.2° | 120.0° |
CA | CB | HCB1 | HCB2 | 116.4° | 119.9° |
CA | CB | CG | SD | 168.0° | 180.0° |
CA | CB | CG | HCG1 | 66.7° | 59.9° |
CA | CB | CG | HCG2 | 42.6° | 60.0° |
CB | CA | C | O | 63.0° | 90.0° |
CB | CA | C | OXT | 116.3° | 90.0° |
C | CA | CB | CG | 73.6° | 180.0° |
C | CA | CB | HCB1 | 51.7° | 60.0° |
C | CA | CB | HCB2 | 161.1° | 60.0° |
CA | C | O | OXT | 179.3° | 180.0° |
CA | C | OXT | HOX1 | 179.9° | 180.0° |
HCA1 | CA | CB | CG | 168.6° | 60.0° |
HCA1 | CA | CB | HCB1 | 66.1° | 180.0° |
HCA1 | CA | CB | HCB2 | 43.3° | 60.0° |
HCA1 | CA | C | O | 57.2° | 150.0° |
HCA1 | CA | C | OXT | 123.4° | 30.1° |
CG | CB | HCB1 | HCB2 | 116.5° | 120.0° |
CB | CG | SD | HCG1 | 125.3° | 120.0° |
CB | CG | SD | HCG2 | 125.3° | 120.0° |
CB | CG | HCG1 | HCG2 | 118.5° | 120.0° |
HCB1 | CB | CG | SD | 42.7° | 60.0° |
HCB1 | CB | CG | HCG1 | 168.0° | 180.0° |
HCB1 | CB | CG | HCG2 | 82.6° | 60.1° |
HCB2 | CB | CG | SD | 66.8° | 60.0° |
HCB2 | CB | CG | HCG1 | 58.5° | 60.0° |
HCB2 | CB | CG | HCG2 | 167.8° | 180.0° |
SD | CG | HCG1 | HCG2 | 118.6° | 119.9° |
O | C | OXT | HOX1 | 0.7° | 0.0° |