RHA
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O1 | sing | 1.43Å | 1.39Å | |
C1 | C2 | sing | 1.53Å | 1.49Å | |
C1 | O5 | sing | 1.43Å | 1.45Å | |
C1 | H1 | sing | 1.09Å | 1.12Å | |
O1 | P | sing | 1.61Å | 1.52Å | |
C2 | O2 | sing | 1.43Å | 1.48Å | |
C2 | C3 | sing | 1.53Å | 1.48Å | |
C2 | H2 | sing | 1.09Å | 1.12Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C3 | O3 | sing | 1.43Å | 1.42Å | |
C3 | C4 | sing | 1.53Å | 1.52Å | |
C3 | H3 | sing | 1.09Å | 1.11Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.43Å | 1.40Å | |
C4 | C5 | sing | 1.53Å | 1.54Å | |
C4 | H4 | sing | 1.09Å | 1.12Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | O5 | sing | 1.43Å | 1.46Å | |
C5 | C6 | sing | 1.53Å | 1.53Å | |
C5 | H5 | sing | 1.09Å | 1.11Å | |
C6 | H61 | sing | 1.09Å | 1.11Å | |
C6 | H62 | sing | 1.09Å | 1.12Å | |
C6 | H63 | sing | 1.09Å | 1.12Å | |
P | O1P | doub | 1.48Å | 1.55Å | |
P | O2P | sing | 1.61Å | 1.46Å | |
P | O3P | sing | 1.61Å | 1.42Å | |
O2P | HOP2 | sing | 0.97Å | 0.95Å | |
O3P | HOP3 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | C2 | 97.0° | 109.4° |
O1 | C1 | O5 | 111.4° | 109.5° |
O1 | C1 | H1 | 117.4° | 109.4° |
C1 | O1 | P | 130.2° | 106.8° |
C2 | C1 | O5 | 112.9° | 109.8° |
C2 | C1 | H1 | 115.9° | 109.4° |
C1 | C2 | O2 | 113.8° | 109.6° |
C1 | C2 | C3 | 105.7° | 109.0° |
C1 | C2 | H2 | 107.1° | 109.6° |
O5 | C1 | H1 | 102.7° | 109.4° |
C1 | O5 | C5 | 116.8° | 107.6° |
O1 | P | O1P | 116.0° | 109.4° |
O1 | P | O2P | 113.7° | 109.5° |
O1 | P | O3P | 105.6° | 109.6° |
O2 | C2 | C3 | 102.3° | 109.6° |
O2 | C2 | H2 | 110.2° | 109.5° |
C2 | O2 | HO2 | 113.8° | 106.8° |
C3 | C2 | H2 | 117.8° | 109.6° |
C2 | C3 | O3 | 100.5° | 109.6° |
C2 | C3 | C4 | 105.4° | 108.6° |
C2 | C3 | H3 | 119.1° | 109.6° |
O3 | C3 | C4 | 114.0° | 109.7° |
O3 | C3 | H3 | 111.1° | 109.6° |
C3 | O3 | HO3 | 100.6° | 106.8° |
C4 | C3 | H3 | 106.8° | 109.7° |
C3 | C4 | O4 | 111.4° | 109.5° |
C3 | C4 | C5 | 108.7° | 109.0° |
C3 | C4 | H4 | 109.8° | 109.6° |
O4 | C4 | C5 | 112.8° | 109.5° |
O4 | C4 | H4 | 105.5° | 109.6° |
C4 | O4 | HO4 | 111.5° | 106.8° |
C5 | C4 | H4 | 108.4° | 109.7° |
C4 | C5 | O5 | 105.6° | 109.7° |
C4 | C5 | C6 | 116.8° | 109.4° |
C4 | C5 | H5 | 108.9° | 109.5° |
O5 | C5 | C6 | 113.9° | 109.4° |
O5 | C5 | H5 | 112.1° | 109.4° |
C6 | C5 | H5 | 99.6° | 109.4° |
C5 | C6 | H61 | 116.8° | 109.4° |
C5 | C6 | H62 | 109.5° | 109.5° |
C5 | C6 | H63 | 109.6° | 109.5° |
H61 | C6 | H62 | 109.6° | 109.4° |
H61 | C6 | H63 | 109.6° | 109.5° |
H62 | C6 | H63 | 100.6° | 109.5° |
O1P | P | O2P | 107.1° | 109.4° |
O1P | P | O3P | 103.5° | 109.5° |
O2P | P | O3P | 110.3° | 109.5° |
P | O2P | HOP2 | 113.6° | 106.8° |
P | O3P | HOP3 | 105.7° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | C2 | O5 | 116.8° | 120.1° |
O1 | C1 | C2 | H1 | 125.1° | 119.8° |
O1 | C1 | O5 | H1 | 126.5° | 119.9° |
O1 | C1 | C2 | O2 | 170.4° | 178.8° |
O1 | C1 | C2 | C3 | 58.9° | 58.8° |
O1 | C1 | C2 | H2 | 67.5° | 61.1° |
O1 | C1 | O5 | C5 | 56.2° | 52.4° |
C1 | O1 | P | O1P | 47.9° | 60.0° |
C1 | O1 | P | O2P | 172.8° | 180.0° |
C1 | O1 | P | O3P | 66.2° | 60.0° |
C2 | C1 | O5 | H1 | 125.5° | 120.1° |
C2 | C1 | O1 | P | 105.2° | 149.6° |
C1 | C2 | O2 | C3 | 113.5° | 119.6° |
C1 | C2 | O2 | H2 | 120.4° | 120.2° |
C1 | C2 | C3 | H2 | 119.6° | 119.9° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
C1 | C2 | C3 | O3 | 174.1° | 173.6° |
C1 | C2 | C3 | C4 | 67.2° | 53.8° |
C1 | C2 | C3 | H3 | 52.5° | 66.1° |
C2 | C1 | O5 | C5 | 51.7° | 67.7° |
O5 | C1 | O1 | P | 136.8° | 90.1° |
O5 | C1 | C2 | O2 | 53.6° | 58.7° |
O5 | C1 | C2 | C3 | 57.8° | 61.3° |
O5 | C1 | C2 | H2 | 175.7° | 178.8° |
C1 | O5 | C5 | C4 | 50.1° | 67.7° |
C1 | O5 | C5 | C6 | 179.5° | 172.3° |
C1 | O5 | C5 | H5 | 68.4° | 52.4° |
H1 | C1 | O1 | P | 18.8° | 29.8° |
H1 | C1 | C2 | O2 | 64.5° | 61.4° |
H1 | C1 | C2 | C3 | 175.9° | 178.7° |
H1 | C1 | C2 | H2 | 57.6° | 58.7° |
H1 | C1 | O5 | C5 | 177.3° | 172.3° |
O1 | P | O1P | O2P | 128.2° | 119.9° |
O1 | P | O1P | O3P | 115.2° | 120.1° |
O1 | P | O2P | O3P | 118.4° | 120.1° |
O1 | P | O2P | HOP2 | 180.0° | 180.0° |
O1 | P | O3P | HOP3 | 180.0° | 60.0° |
O2 | C2 | C3 | H2 | 121.0° | 120.2° |
O2 | C2 | C3 | O3 | 66.6° | 53.7° |
O2 | C2 | C3 | C4 | 52.2° | 66.1° |
O2 | C2 | C3 | H3 | 171.9° | 174.0° |
C3 | C2 | O2 | HO2 | 66.6° | 179.5° |
C2 | C3 | O3 | C4 | 112.2° | 119.2° |
C2 | C3 | O3 | H3 | 127.1° | 120.3° |
C2 | C3 | C4 | H3 | 127.6° | 119.8° |
C2 | C3 | O3 | HO3 | 180.0° | 60.0° |
C2 | C3 | C4 | O4 | 163.6° | 173.6° |
C2 | C3 | C4 | C5 | 71.5° | 53.9° |
C2 | C3 | C4 | H4 | 47.0° | 66.1° |
H2 | C2 | O2 | HO2 | 59.6° | 60.2° |
H2 | C2 | C3 | O3 | 54.4° | 66.5° |
H2 | C2 | C3 | C4 | 173.2° | 173.7° |
H2 | C2 | C3 | H3 | 67.1° | 53.9° |
O3 | C3 | C4 | H3 | 123.2° | 120.4° |
O3 | C3 | C4 | O4 | 54.3° | 66.6° |
O3 | C3 | C4 | C5 | 179.2° | 173.7° |
O3 | C3 | C4 | H4 | 62.3° | 53.6° |
C4 | C3 | O3 | HO3 | 67.8° | 179.2° |
C3 | C4 | O4 | C5 | 122.6° | 119.4° |
C3 | C4 | O4 | H4 | 119.2° | 120.2° |
C3 | C4 | C5 | H4 | 119.4° | 119.9° |
C3 | C4 | O4 | HO4 | 179.9° | 180.0° |
C3 | C4 | C5 | O5 | 59.4° | 61.4° |
C3 | C4 | C5 | C6 | 172.9° | 178.6° |
C3 | C4 | C5 | H5 | 61.2° | 58.7° |
H3 | C3 | O3 | HO3 | 52.9° | 60.4° |
H3 | C3 | C4 | O4 | 68.8° | 53.9° |
H3 | C3 | C4 | C5 | 56.1° | 65.9° |
H3 | C3 | C4 | H4 | 174.6° | 174.1° |
O4 | C4 | C5 | H4 | 116.5° | 120.3° |
O4 | C4 | C5 | O5 | 176.5° | 178.8° |
O4 | C4 | C5 | C6 | 48.8° | 58.8° |
O4 | C4 | C5 | H5 | 62.9° | 61.1° |
C5 | C4 | O4 | HO4 | 57.4° | 60.5° |
C4 | C5 | O5 | C6 | 129.4° | 120.0° |
C4 | C5 | O5 | H5 | 118.5° | 120.2° |
C4 | C5 | C6 | H5 | 117.0° | 120.0° |
C4 | C5 | C6 | H61 | 180.0° | 179.9° |
C4 | C5 | C6 | H62 | 54.7° | 60.1° |
C4 | C5 | C6 | H63 | 54.7° | 59.9° |
H4 | C4 | O4 | HO4 | 60.8° | 59.8° |
H4 | C4 | C5 | O5 | 60.0° | 58.5° |
H4 | C4 | C5 | C6 | 67.7° | 61.5° |
H4 | C4 | C5 | H5 | 179.4° | 178.6° |
O5 | C5 | C6 | H5 | 119.5° | 119.9° |
O5 | C5 | C6 | H61 | 56.5° | 59.9° |
O5 | C5 | C6 | H62 | 68.8° | 60.1° |
O5 | C5 | C6 | H63 | 178.2° | 179.9° |
C5 | C6 | H61 | H62 | 125.2° | 120.0° |
C5 | C6 | H61 | H63 | 125.3° | 120.0° |
C5 | C6 | H62 | H63 | 115.3° | 120.0° |
H5 | C5 | C6 | H61 | 63.0° | 60.0° |
H5 | C5 | C6 | H62 | 171.7° | 179.9° |
H5 | C5 | C6 | H63 | 62.3° | 60.0° |
H61 | C6 | H62 | H63 | 115.4° | 120.0° |
O1P | P | O2P | O3P | 112.0° | 120.0° |
O1P | P | O2P | HOP2 | 50.5° | 60.1° |
O1P | P | O3P | HOP3 | 57.6° | 180.0° |
O2P | P | O3P | HOP3 | 56.8° | 60.1° |
O3P | P | O2P | HOP2 | 61.5° | 59.9° |