RH5
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N01 | C04 | doub | 1.30Å | 1.36Å | |
C08 | C10 | doub | 1.38Å | 1.38Å | Aromatic |
C08 | C07 | sing | 1.40Å | 1.40Å | Aromatic |
C04 | N05 | sing | 1.38Å | 1.29Å | |
C04 | C07 | sing | 1.48Å | 1.49Å | |
C10 | C12 | sing | 1.38Å | 1.39Å | Aromatic |
C07 | C15 | doub | 1.40Å | 1.41Å | Aromatic |
O46 | B45 | sing | 1.42Å | 1.35Å | |
O48 | B45 | sing | 1.43Å | 1.37Å | |
O48 | C30 | sing | 1.43Å | 1.45Å | |
C12 | C30 | sing | 1.51Å | 1.51Å | |
C12 | C13 | doub | 1.38Å | 1.39Å | Aromatic |
B45 | C44 | sing | 1.58Å | 1.54Å | |
C15 | C13 | sing | 1.39Å | 1.39Å | Aromatic |
C15 | O16 | sing | 1.36Å | 1.38Å | |
C30 | C32 | sing | 1.53Å | 1.52Å | |
O16 | C17 | sing | 1.43Å | 1.44Å | |
C44 | C42 | doub | 1.39Å | 1.40Å | Aromatic |
C44 | C35 | sing | 1.40Å | 1.42Å | Aromatic |
C32 | C35 | sing | 1.50Å | 1.51Å | |
C42 | C40 | sing | 1.38Å | 1.39Å | Aromatic |
C28 | N27 | doub | 1.32Å | 1.34Å | Aromatic |
C28 | C20 | sing | 1.38Å | 1.39Å | Aromatic |
C35 | C36 | doub | 1.38Å | 1.40Å | Aromatic |
C17 | C20 | sing | 1.51Å | 1.51Å | |
N27 | C25 | sing | 1.32Å | 1.34Å | Aromatic |
C20 | C21 | doub | 1.39Å | 1.39Å | Aromatic |
C40 | C38 | doub | 1.38Å | 1.38Å | Aromatic |
C25 | C23 | doub | 1.38Å | 1.38Å | Aromatic |
C36 | C38 | sing | 1.38Å | 1.39Å | Aromatic |
C21 | C23 | sing | 1.39Å | 1.38Å | Aromatic |
C10 | H1 | sing | 1.08Å | 1.08Å | |
C13 | H2 | sing | 1.08Å | 1.08Å | |
C17 | H3 | sing | 1.09Å | 1.10Å | |
C17 | H4 | sing | 1.09Å | 1.10Å | |
C21 | H5 | sing | 1.08Å | 1.08Å | |
C28 | H6 | sing | 1.08Å | 1.08Å | |
N01 | H7 | sing | 0.97Å | 1.00Å | |
N05 | H8 | sing | 0.97Å | 1.00Å | |
N05 | H9 | sing | 0.97Å | 1.00Å | |
C08 | H10 | sing | 1.08Å | 1.08Å | |
C23 | H11 | sing | 1.08Å | 1.08Å | |
C25 | H12 | sing | 1.08Å | 1.08Å | |
C30 | H13 | sing | 1.09Å | 1.10Å | |
C32 | H14 | sing | 1.09Å | 1.10Å | |
C32 | H15 | sing | 1.09Å | 1.10Å | |
C36 | H16 | sing | 1.08Å | 1.08Å | |
C38 | H17 | sing | 1.08Å | 1.08Å | |
C40 | H18 | sing | 1.08Å | 1.08Å | |
C42 | H19 | sing | 1.08Å | 1.08Å | |
O46 | H20 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N01 | C04 | N05 | 118.3° | 120.0° |
N01 | C04 | C07 | 120.3° | 120.0° |
C04 | N01 | H7 | 112.0° | 120.0° |
C10 | C08 | C07 | 120.8° | 119.9° |
C08 | C10 | C12 | 121.1° | 120.3° |
C08 | C10 | H1 | 119.5° | 119.8° |
C10 | C08 | H10 | 119.6° | 120.0° |
C08 | C07 | C04 | 117.8° | 120.2° |
C08 | C07 | C15 | 117.8° | 119.7° |
C07 | C08 | H10 | 119.6° | 120.0° |
N05 | C04 | C07 | 121.4° | 120.0° |
C04 | N05 | H8 | 120.0° | 120.0° |
C04 | N05 | H9 | 120.0° | 120.0° |
C04 | C07 | C15 | 124.4° | 120.2° |
C10 | C12 | C30 | 121.4° | 119.8° |
C10 | C12 | C13 | 118.8° | 120.3° |
C12 | C10 | H1 | 119.5° | 119.9° |
C07 | C15 | C13 | 120.9° | 119.7° |
C07 | C15 | O16 | 116.5° | 120.2° |
O46 | B45 | O48 | 116.3° | 122.1° |
O46 | B45 | C44 | 122.3° | 122.1° |
B45 | O46 | H20 | 109.5° | 114.0° |
B45 | O48 | C30 | 120.0° | 111.4° |
O48 | B45 | C44 | 115.2° | 115.9° |
O48 | C30 | C12 | 110.7° | 109.4° |
O48 | C30 | C32 | 106.7° | 110.3° |
O48 | C30 | H13 | 109.1° | 109.2° |
C30 | C12 | C13 | 119.8° | 119.9° |
C12 | C30 | C32 | 113.6° | 109.3° |
C12 | C30 | H13 | 108.3° | 109.4° |
C12 | C13 | C15 | 120.6° | 120.1° |
C12 | C13 | H2 | 119.7° | 119.9° |
B45 | C44 | C42 | 123.1° | 121.1° |
B45 | C44 | C35 | 119.0° | 118.4° |
C13 | C15 | O16 | 122.6° | 120.1° |
C15 | C13 | H2 | 119.7° | 120.0° |
C15 | O16 | C17 | 119.6° | 117.1° |
C30 | C32 | C35 | 110.7° | 111.2° |
C32 | C30 | H13 | 108.2° | 109.3° |
C30 | C32 | H14 | 109.1° | 109.2° |
C30 | C32 | H15 | 109.1° | 109.1° |
O16 | C17 | C20 | 114.0° | 109.5° |
O16 | C17 | H3 | 108.3° | 109.5° |
O16 | C17 | H4 | 108.3° | 109.4° |
C42 | C44 | C35 | 117.8° | 120.6° |
C44 | C42 | C40 | 121.4° | 119.5° |
C44 | C42 | H19 | 119.3° | 120.2° |
C44 | C35 | C32 | 118.9° | 120.3° |
C44 | C35 | C36 | 120.0° | 119.4° |
C32 | C35 | C36 | 121.1° | 120.4° |
C35 | C32 | H14 | 109.2° | 109.1° |
C35 | C32 | H15 | 109.2° | 109.2° |
C42 | C40 | C38 | 120.1° | 119.9° |
C42 | C40 | H18 | 120.0° | 120.0° |
C40 | C42 | H19 | 119.3° | 120.2° |
N27 | C28 | C20 | 124.2° | 120.8° |
C28 | N27 | C25 | 117.2° | 121.7° |
N27 | C28 | H6 | 117.9° | 119.7° |
C28 | C20 | C17 | 121.9° | 120.4° |
C28 | C20 | C21 | 116.9° | 119.2° |
C20 | C28 | H6 | 117.9° | 119.6° |
C35 | C36 | C38 | 120.8° | 120.0° |
C35 | C36 | H16 | 119.6° | 120.0° |
C17 | C20 | C21 | 121.2° | 120.4° |
C20 | C17 | H3 | 108.3° | 109.5° |
C20 | C17 | H4 | 108.4° | 109.5° |
N27 | C25 | C23 | 123.2° | 120.7° |
N27 | C25 | H12 | 118.4° | 119.6° |
C20 | C21 | C23 | 120.1° | 118.4° |
C20 | C21 | H5 | 119.9° | 120.8° |
C40 | C38 | C36 | 120.0° | 120.6° |
C40 | C38 | H17 | 120.0° | 119.7° |
C38 | C40 | H18 | 120.0° | 120.0° |
C25 | C23 | C21 | 118.3° | 119.2° |
C25 | C23 | H11 | 120.9° | 120.4° |
C23 | C25 | H12 | 118.4° | 119.7° |
C38 | C36 | H16 | 119.6° | 120.0° |
C36 | C38 | H17 | 120.0° | 119.7° |
C23 | C21 | H5 | 119.9° | 120.8° |
C21 | C23 | H11 | 120.9° | 120.4° |
H3 | C17 | H4 | 109.5° | 109.4° |
H8 | N05 | H9 | 120.0° | 120.1° |
H14 | C32 | H15 | 109.5° | 109.1° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N01 | C04 | C07 | C08 | 33.0° | 174.1° |
N01 | C04 | N05 | C07 | 180.0° | 179.9° |
N01 | C04 | C07 | C15 | 146.1° | 6.1° |
N01 | C04 | N05 | H8 | 180.0° | 0.0° |
N01 | C04 | N05 | H9 | 0.0° | 180.0° |
C10 | C08 | C07 | H10 | 180.0° | 179.5° |
C10 | C08 | C07 | C04 | 179.3° | 179.8° |
C08 | C10 | C12 | H1 | 180.0° | 179.7° |
C10 | C08 | C07 | C15 | 0.1° | 0.5° |
C08 | C10 | C12 | C30 | 179.5° | 179.7° |
C08 | C10 | C12 | C13 | 0.9° | 0.2° |
C08 | C07 | C04 | N05 | 146.9° | 5.8° |
C08 | C07 | C04 | C15 | 179.2° | 179.7° |
C07 | C08 | C10 | C12 | 0.4° | 0.5° |
C08 | C07 | C15 | C13 | 0.1° | 0.3° |
C08 | C07 | C15 | O16 | 179.2° | 179.8° |
C07 | C08 | C10 | H1 | 179.6° | 179.8° |
N05 | C04 | C07 | C15 | 33.9° | 173.9° |
N05 | C04 | N01 | H7 | 180.0° | 175.4° |
C04 | N05 | H8 | H9 | 180.0° | 179.9° |
C04 | C07 | C15 | C13 | 179.2° | 180.0° |
C04 | C07 | C15 | O16 | 1.7° | 0.1° |
C07 | C04 | N01 | H7 | 0.0° | 4.5° |
C07 | C04 | N05 | H8 | 0.0° | 180.0° |
C07 | C04 | N05 | H9 | 180.0° | 0.1° |
C04 | C07 | C08 | H10 | 0.7° | 0.2° |
C10 | C12 | C30 | O48 | 26.6° | 40.9° |
C10 | C12 | C30 | C13 | 179.6° | 180.0° |
C10 | C12 | C13 | C15 | 0.9° | 0.0° |
C10 | C12 | C30 | C32 | 146.7° | 80.0° |
C10 | C12 | C13 | H2 | 179.1° | 180.0° |
C12 | C10 | C08 | H10 | 179.6° | 180.0° |
C10 | C12 | C30 | H13 | 93.0° | 160.4° |
C07 | C15 | C13 | C12 | 0.4° | 0.0° |
C07 | C15 | C13 | O16 | 179.0° | 179.9° |
C07 | C15 | O16 | C17 | 164.0° | 180.0° |
C07 | C15 | C13 | H2 | 179.6° | 179.9° |
C15 | C07 | C08 | H10 | 179.9° | 179.9° |
O46 | B45 | O48 | C44 | 153.0° | 179.9° |
O46 | B45 | O48 | C30 | 179.6° | 138.7° |
O46 | B45 | C44 | C42 | 32.2° | 8.4° |
O46 | B45 | C44 | C35 | 145.2° | 171.3° |
B45 | O48 | C30 | C12 | 177.1° | 174.1° |
B45 | O48 | C30 | C32 | 58.8° | 65.6° |
O48 | B45 | C44 | C42 | 176.6° | 171.5° |
O48 | B45 | C44 | C35 | 5.9° | 8.8° |
B45 | O48 | C30 | H13 | 57.9° | 54.5° |
O48 | B45 | O46 | H20 | 0.0° | 0.0° |
O48 | C30 | C12 | C32 | 120.1° | 120.9° |
O48 | C30 | C12 | H13 | 119.6° | 119.5° |
O48 | C30 | C12 | C13 | 153.8° | 139.1° |
C30 | O48 | B45 | C44 | 26.7° | 41.3° |
O48 | C30 | C32 | H13 | 117.3° | 120.0° |
O48 | C30 | C32 | C35 | 57.3° | 55.8° |
O48 | C30 | C32 | H14 | 177.6° | 176.2° |
O48 | C30 | C32 | H15 | 62.9° | 64.6° |
C30 | C12 | C13 | C15 | 179.5° | 180.0° |
C12 | C30 | C32 | H13 | 120.3° | 119.7° |
C12 | C30 | C32 | C35 | 179.7° | 176.1° |
C30 | C12 | C10 | H1 | 0.5° | 0.0° |
C30 | C12 | C13 | H2 | 0.5° | 0.1° |
C12 | C30 | C32 | H14 | 60.1° | 63.5° |
C12 | C30 | C32 | H15 | 59.5° | 55.7° |
C12 | C13 | C15 | H2 | 180.0° | 180.0° |
C12 | C13 | C15 | O16 | 178.7° | 179.9° |
C13 | C12 | C30 | C32 | 33.7° | 100.0° |
C13 | C12 | C10 | H1 | 179.1° | 180.0° |
C13 | C12 | C30 | H13 | 86.6° | 19.6° |
B45 | C44 | C42 | C35 | 177.5° | 179.7° |
B45 | C44 | C35 | C32 | 2.2° | 0.6° |
B45 | C44 | C42 | C40 | 177.0° | 179.6° |
B45 | C44 | C35 | C36 | 177.0° | 179.5° |
B45 | C44 | C42 | H19 | 3.1° | 0.4° |
C44 | B45 | O46 | H20 | 150.9° | 180.0° |
C13 | C15 | O16 | C17 | 15.1° | 0.1° |
C15 | O16 | C17 | C20 | 62.1° | 180.0° |
O16 | C15 | C13 | H2 | 1.3° | 0.0° |
C15 | O16 | C17 | H3 | 58.6° | 59.9° |
C15 | O16 | C17 | H4 | 177.3° | 60.0° |
C30 | C32 | C35 | C44 | 30.2° | 23.2° |
C30 | C32 | C35 | H14 | 120.2° | 120.5° |
C30 | C32 | C35 | H15 | 120.2° | 120.4° |
C30 | C32 | C35 | C36 | 150.6° | 156.9° |
C30 | C32 | H14 | H15 | 119.4° | 119.2° |
O16 | C17 | C20 | C28 | 26.1° | 90.3° |
O16 | C17 | C20 | H3 | 120.7° | 120.1° |
O16 | C17 | C20 | H4 | 120.6° | 120.0° |
O16 | C17 | C20 | C21 | 154.7° | 90.0° |
O16 | C17 | H3 | H4 | 117.9° | 119.9° |
C42 | C44 | C35 | C32 | 179.8° | 179.7° |
C44 | C42 | C40 | H19 | 180.0° | 180.0° |
C42 | C44 | C35 | C36 | 0.6° | 0.2° |
C44 | C42 | C40 | C38 | 0.1° | 0.0° |
C44 | C42 | C40 | H18 | 179.9° | 180.0° |
C44 | C35 | C32 | C36 | 179.2° | 179.9° |
C35 | C44 | C42 | C40 | 0.5° | 0.1° |
C44 | C35 | C36 | C38 | 0.2° | 0.0° |
C44 | C35 | C32 | H14 | 150.4° | 143.7° |
C44 | C35 | C32 | H15 | 90.0° | 97.2° |
C44 | C35 | C36 | H16 | 179.7° | 179.9° |
C35 | C44 | C42 | H19 | 179.4° | 179.9° |
C32 | C35 | C36 | C38 | 179.4° | 179.9° |
C35 | C32 | C30 | H13 | 60.0° | 64.2° |
C35 | C32 | H14 | H15 | 119.5° | 119.2° |
C32 | C35 | C36 | H16 | 0.5° | 0.3° |
C42 | C40 | C38 | H18 | 180.0° | 179.9° |
C42 | C40 | C38 | C36 | 0.2° | 0.2° |
C42 | C40 | C38 | H17 | 179.7° | 179.9° |
N27 | C28 | C20 | H6 | 180.0° | 179.9° |
N27 | C28 | C20 | C17 | 179.2° | 179.9° |
N27 | C28 | C20 | C21 | 1.5° | 0.2° |
C28 | N27 | C25 | C23 | 0.5° | 0.4° |
C28 | N27 | C25 | H12 | 179.5° | 179.9° |
C28 | C20 | C17 | C21 | 179.3° | 179.7° |
C20 | C28 | N27 | C25 | 1.0° | 0.1° |
C28 | C20 | C21 | C23 | 1.6° | 0.3° |
C28 | C20 | C17 | H3 | 146.8° | 29.8° |
C28 | C20 | C17 | H4 | 94.5° | 149.7° |
C28 | C20 | C21 | H5 | 178.4° | 179.8° |
C35 | C36 | C38 | C40 | 0.2° | 0.1° |
C35 | C36 | C38 | H16 | 180.0° | 179.9° |
C36 | C35 | C32 | H14 | 30.4° | 36.4° |
C36 | C35 | C32 | H15 | 89.2° | 82.7° |
C35 | C36 | C38 | H17 | 179.8° | 179.9° |
C17 | C20 | C21 | C23 | 179.1° | 180.0° |
C20 | C17 | H3 | H4 | 118.0° | 120.0° |
C17 | C20 | C21 | H5 | 0.9° | 0.1° |
C17 | C20 | C28 | H6 | 0.8° | 0.0° |
N27 | C25 | C23 | H12 | 180.0° | 179.6° |
N27 | C25 | C23 | C21 | 0.7° | 0.3° |
C25 | N27 | C28 | H6 | 179.0° | 179.9° |
N27 | C25 | C23 | H11 | 179.3° | 179.6° |
C20 | C21 | C23 | C25 | 1.2° | 0.1° |
C20 | C21 | C23 | H5 | 180.0° | 179.9° |
C21 | C20 | C17 | H3 | 34.0° | 149.9° |
C21 | C20 | C17 | H4 | 84.7° | 30.0° |
C21 | C20 | C28 | H6 | 178.5° | 179.7° |
C20 | C21 | C23 | H11 | 178.8° | 180.0° |
C40 | C38 | C36 | H17 | 180.0° | 179.9° |
C40 | C38 | C36 | H16 | 179.8° | 180.0° |
C38 | C40 | C42 | H19 | 179.8° | 180.0° |
C25 | C23 | C21 | H11 | 180.0° | 180.0° |
C25 | C23 | C21 | H5 | 178.8° | 180.0° |
C36 | C38 | C40 | H18 | 179.8° | 179.9° |
C21 | C23 | C25 | H12 | 179.3° | 180.0° |
H1 | C10 | C08 | H10 | 0.4° | 0.2° |
H5 | C21 | C23 | H11 | 1.2° | 0.1° |
H11 | C23 | C25 | H12 | 0.7° | 0.0° |
H13 | C30 | C32 | H14 | 60.3° | 56.2° |
H13 | C30 | C32 | H15 | 179.8° | 175.3° |
H16 | C36 | C38 | H17 | 0.2° | 0.0° |
H17 | C38 | C40 | H18 | 0.3° | 0.0° |
H18 | C40 | C42 | H19 | 0.2° | 0.0° |