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RGK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.39Å1.35Å
CC1doub1.39Å1.37ÅAromatic
CC5sing1.39Å1.37ÅAromatic
OC13doub1.22Å1.25Å
C1C2sing1.38Å1.39ÅAromatic
N1C6doub1.31Å1.35Å
N1C7sing1.35Å1.35Å
C2C3doub1.40Å1.39ÅAromatic
N2C6sing1.37Å1.36Å
N2C13sing1.35Å1.34Å
C3C4sing1.40Å1.41ÅAromatic
C3C6sing1.48Å1.48Å
C4C5doub1.38Å1.40ÅAromatic
C7C8doub1.40Å1.40ÅAromatic
C7C12sing1.41Å1.47ÅAromatic
C8C9sing1.38Å1.36ÅAromatic
C9C10doub1.39Å1.40ÅAromatic
C10C11sing1.38Å1.39ÅAromatic
C11C12doub1.39Å1.39ÅAromatic
C12C13sing1.47Å1.49Å
NHNsing0.97Å1.00Å
NHNAsing0.97Å1.00Å
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
N2HN2sing0.97Å1.00Å
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCC1120.4°120.0°
NCC5119.6°119.9°
CNHN109.5°120.0°
CNHNA109.5°120.0°
C1CC5119.9°120.1°
CC1C2120.4°120.1°
CC1H1119.8°119.9°
CC5C4120.9°120.1°
CC5H5119.6°120.0°
OC13N2119.9°121.2°
OC13C12121.3°121.2°
C1C2C3120.4°119.9°
C2C1H1119.8°120.0°
C1C2H2119.8°120.0°
C6N1C7122.6°121.7°
N1C6N2120.9°123.0°
N1C6C3116.9°118.5°
N1C7C8121.6°121.5°
N1C7C12119.2°119.2°
C2C3C4119.1°119.9°
C2C3C6120.9°120.0°
C3C2H2119.8°120.1°
C6N2C13122.7°120.4°
N2C6C3122.1°118.5°
C6N2HN2118.6°119.7°
N2C13C12118.7°117.5°
C13N2HN2118.6°119.9°
C4C3C6119.7°120.1°
C3C4C5119.2°119.9°
C3C4H4120.4°120.0°
C5C4H4120.4°120.1°
C4C5H5119.5°119.9°
C8C7C12119.2°119.2°
C7C8C9118.1°119.8°
C7C8H8121.0°120.1°
C7C12C11120.4°120.0°
C7C12C13115.6°118.1°
C8C9C10123.3°120.8°
C9C8H8121.0°120.2°
C8C9H9118.4°119.6°
C9C10C11120.7°120.6°
C10C9H9118.3°119.6°
C9C10H10119.6°119.7°
C10C11C12118.3°119.6°
C11C10H10119.7°119.7°
C10C11H11120.9°120.2°
C11C12C13124.0°121.8°
C12C11H11120.9°120.2°
HNNHNA109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCC1C5178.2°179.7°
NCC1C2179.8°180.0°
NCC5C4179.4°179.7°
CNHNHNA120.0°180.0°
NCC1H10.2°0.0°
NCC5H50.6°0.0°
CC1C2H1180.0°180.0°
CC1C2C32.8°0.0°
C1CC5C41.1°0.6°
C1CNHN180.0°0.0°
C1CNHNA60.0°180.0°
CC1C2H2177.2°180.0°
C1CC5H5178.9°179.7°
C5CC1C21.6°0.3°
CC5C4C31.8°0.6°
CC5C4H5180.0°179.7°
C5CNHN1.8°179.7°
C5CNHNA118.2°0.3°
C5CC1H1178.4°179.7°
CC5C4H4178.1°179.7°
OC13N2C6177.8°179.9°
OC13N2C12176.8°179.9°
OC13C12C7178.4°179.9°
OC13C12C111.2°0.1°
OC13N2HN22.2°0.1°
C1C2C3H2180.0°180.0°
C1C2C3C43.5°0.0°
C1C2C3C6177.3°180.0°
N1C6C3C214.3°0.0°
N1C6N2C3175.3°180.0°
N1C6N2C133.5°0.0°
N1C6C3C4159.4°180.0°
C6N1C7C8179.9°180.0°
C6N1C7C120.7°0.1°
N1C6N2HN2176.5°180.0°
C7N1C6N21.0°0.0°
C7N1C6C3176.5°179.9°
N1C7C8C12179.4°180.0°
N1C7C8C9178.0°180.0°
N1C7C12C11177.8°180.0°
N1C7C12C132.6°0.0°
N1C7C8H82.0°0.0°
C2C3C6N2170.3°180.0°
C2C3C4C6173.8°179.9°
C2C3C4C53.0°0.3°
C3C2C1H1177.2°180.0°
C2C3C4H4177.0°180.0°
C6N2C13HN2180.0°180.0°
N2C6C3C416.0°0.1°
C6N2C13C125.4°0.0°
C13N2C6C3178.7°180.0°
N2C13C12C74.8°0.0°
N2C13C12C11175.5°180.0°
C3C4C5H4180.0°179.7°
C4C3C2H2176.5°180.0°
C3C4C5H5178.2°179.7°
C6C3C4C5176.8°179.8°
C6C3C2H22.7°0.0°
C3C6N2HN21.3°0.0°
C6C3C4H43.1°0.1°
C7C8C9H8180.0°180.0°
C7C8C9C100.2°0.0°
C8C7C12C111.6°0.0°
C8C7C12C13178.0°180.0°
C7C8C9H9179.8°180.0°
C12C7C8C91.4°0.0°
C7C12C11C100.2°0.0°
C7C12C11C13179.6°180.0°
C12C7C8H8178.6°180.0°
C7C12C11H11179.8°180.0°
C8C9C10H9180.0°180.0°
C8C9C10C111.6°0.0°
C8C9C10H10178.4°180.0°
C9C10C11H10180.0°180.0°
C9C10C11C121.4°0.0°
C10C9C8H8179.8°180.0°
C9C10C11H11178.6°180.0°
C10C11C12H11180.0°180.0°
C10C11C12C13179.4°180.0°
C11C10C9H9178.3°180.0°
C12C11C10H10178.7°180.0°
C12C13N2HN2174.6°180.0°
C13C12C11H110.6°0.0°
H1C1C2H22.8°0.0°
H4C4C5H51.9°0.0°
H8C8C9H90.2°0.0°
H9C9C10H101.6°0.0°
H10C10C11H111.4°0.0°

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PDB entries from 2024-07-10

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