RF9
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.48Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.51Å | |
| O | C | doub | 1.21Å | 1.25Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CG | CD | sing | 1.53Å | 1.52Å | |
| CD | CE | sing | 1.53Å | 1.52Å | |
| CE | NZ | sing | 1.47Å | 1.48Å | |
| NZ | CX1 | sing | 1.47Å | 1.48Å | |
| O3 | CX2 | doub | 1.21Å | 1.26Å | |
| CX1 | CX2 | sing | 1.51Å | 1.50Å | |
| CX1 | C1 | sing | 1.53Å | 1.53Å | |
| CX2 | O2 | sing | 1.34Å | 1.26Å | |
| C | OXT | sing | 1.34Å | 1.32Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | H5 | sing | 1.09Å | 1.10Å | |
| CB | H6 | sing | 1.09Å | 1.10Å | |
| CG | H7 | sing | 1.09Å | 1.10Å | |
| CG | H8 | sing | 1.09Å | 1.10Å | |
| CD | H9 | sing | 1.09Å | 1.10Å | |
| CD | H10 | sing | 1.09Å | 1.10Å | |
| CE | H11 | sing | 1.09Å | 1.10Å | |
| CE | H12 | sing | 1.09Å | 1.10Å | |
| NZ | H13 | sing | 1.01Å | 1.00Å | |
| C1 | H15 | sing | 1.09Å | 1.10Å | |
| C1 | H16 | sing | 1.09Å | 1.10Å | |
| C1 | H17 | sing | 1.09Å | 1.10Å | |
| CX1 | H18 | sing | 1.09Å | 1.10Å | |
| O2 | H19 | sing | 0.97Å | 0.95Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N | CA | CB | 111.4° | 109.5° |
| N | CA | C | 106.2° | 109.5° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.5° | 111.0° |
| N | CA | HA | 109.5° | 109.4° |
| CB | CA | C | 111.9° | 109.5° |
| CA | CB | CG | 110.8° | 109.5° |
| CB | CA | HA | 108.7° | 109.4° |
| CA | CB | H5 | 109.1° | 109.4° |
| CA | CB | H6 | 109.2° | 109.5° |
| CA | C | O | 119.5° | 119.9° |
| CA | C | OXT | 115.4° | 120.0° |
| C | CA | HA | 109.0° | 109.5° |
| O | C | OXT | 119.3° | 120.1° |
| CB | CG | CD | 115.3° | 109.5° |
| CG | CB | H5 | 109.2° | 109.5° |
| CG | CB | H6 | 109.1° | 109.5° |
| CB | CG | H7 | 108.0° | 109.5° |
| CB | CG | H8 | 108.0° | 109.5° |
| CG | CD | CE | 115.0° | 109.5° |
| CD | CG | H7 | 108.0° | 109.5° |
| CD | CG | H8 | 108.0° | 109.5° |
| CG | CD | H9 | 108.1° | 109.5° |
| CG | CD | H10 | 108.1° | 109.5° |
| CD | CE | NZ | 110.7° | 109.5° |
| CE | CD | H9 | 108.1° | 109.5° |
| CE | CD | H10 | 108.1° | 109.4° |
| CD | CE | H11 | 109.1° | 109.5° |
| CD | CE | H12 | 109.2° | 109.4° |
| CE | NZ | CX1 | 115.1° | 111.0° |
| NZ | CE | H11 | 109.1° | 109.5° |
| NZ | CE | H12 | 109.1° | 109.5° |
| CE | NZ | H13 | 108.0° | 111.0° |
| NZ | CX1 | CX2 | 114.5° | 109.5° |
| NZ | CX1 | C1 | 109.7° | 109.5° |
| CX1 | NZ | H13 | 108.1° | 110.9° |
| NZ | CX1 | H18 | 109.1° | 109.5° |
| O3 | CX2 | CX1 | 118.2° | 120.0° |
| O3 | CX2 | O2 | 123.7° | 120.0° |
| CX2 | CX1 | C1 | 105.9° | 109.5° |
| CX1 | CX2 | O2 | 118.0° | 120.0° |
| CX2 | CX1 | H18 | 108.9° | 109.5° |
| CX1 | C1 | H15 | 109.5° | 109.4° |
| CX1 | C1 | H16 | 109.5° | 109.5° |
| CX1 | C1 | H17 | 109.5° | 109.5° |
| C1 | CX1 | H18 | 108.6° | 109.4° |
| CX2 | O2 | H19 | 109.5° | 116.9° |
| C | OXT | HXT | 109.5° | 117.0° |
| H | N | H2 | 109.5° | 111.0° |
| H5 | CB | H6 | 109.5° | 109.4° |
| H7 | CG | H8 | 109.5° | 109.5° |
| H9 | CD | H10 | 109.5° | 109.5° |
| H11 | CE | H12 | 109.5° | 109.4° |
| H15 | C1 | H16 | 109.5° | 109.4° |
| H15 | C1 | H17 | 109.4° | 109.5° |
| H16 | C1 | H17 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N | CA | CB | C | 118.8° | 120.1° |
| N | CA | CB | HA | 120.8° | 119.9° |
| N | CA | C | HA | 117.9° | 119.9° |
| N | CA | C | O | 53.3° | 20.1° |
| N | CA | CB | CG | 152.8° | 64.9° |
| N | CA | C | OXT | 99.7° | 160.0° |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | CB | H5 | 87.0° | 55.0° |
| N | CA | CB | H6 | 32.6° | 175.0° |
| CB | CA | C | HA | 120.3° | 120.0° |
| CB | CA | C | O | 68.5° | 100.0° |
| CA | CB | CG | H5 | 120.2° | 120.0° |
| CA | CB | CG | H6 | 120.2° | 120.1° |
| CA | CB | CG | CD | 141.6° | 180.0° |
| CB | CA | C | OXT | 138.5° | 80.0° |
| CB | CA | N | H | 180.0° | 176.0° |
| CB | CA | N | H2 | 60.0° | 60.1° |
| CA | CB | H5 | H6 | 119.4° | 120.0° |
| CA | CB | CG | H7 | 97.5° | 60.0° |
| CA | CB | CG | H8 | 20.8° | 60.0° |
| CA | C | O | OXT | 151.9° | 179.9° |
| C | CA | CB | CG | 34.0° | 175.0° |
| C | CA | N | H | 57.9° | 63.9° |
| C | CA | N | H2 | 62.1° | 60.0° |
| C | CA | CB | H5 | 154.2° | 65.0° |
| C | CA | CB | H6 | 86.2° | 54.9° |
| CA | C | OXT | HXT | 153.1° | 180.0° |
| O | C | CA | HA | 171.2° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| CB | CG | CD | H7 | 120.9° | 120.0° |
| CB | CG | CD | H8 | 120.8° | 120.0° |
| CB | CG | CD | CE | 102.3° | 180.0° |
| CG | CB | CA | HA | 86.5° | 55.0° |
| CG | CB | H5 | H6 | 119.4° | 120.0° |
| CB | CG | H7 | H8 | 117.3° | 120.0° |
| CB | CG | CD | H9 | 136.9° | 60.0° |
| CB | CG | CD | H10 | 18.5° | 60.0° |
| CG | CD | CE | H9 | 120.8° | 120.0° |
| CG | CD | CE | H10 | 120.8° | 120.0° |
| CG | CD | CE | NZ | 112.6° | 180.0° |
| CD | CG | CB | H5 | 21.4° | 60.0° |
| CD | CG | CB | H6 | 98.2° | 59.9° |
| CD | CG | H7 | H8 | 117.4° | 120.0° |
| CG | CD | H9 | H10 | 117.5° | 120.0° |
| CG | CD | CE | H11 | 127.2° | 59.9° |
| CG | CD | CE | H12 | 7.5° | 60.0° |
| CD | CE | NZ | H11 | 120.2° | 120.0° |
| CD | CE | NZ | H12 | 120.2° | 120.0° |
| CD | CE | NZ | CX1 | 116.5° | 180.0° |
| CE | CD | CG | H7 | 18.6° | 60.0° |
| CE | CD | CG | H8 | 136.9° | 60.0° |
| CE | CD | H9 | H10 | 117.5° | 120.0° |
| CD | CE | H11 | H12 | 119.4° | 120.0° |
| CD | CE | NZ | H13 | 122.7° | 56.0° |
| CE | NZ | CX1 | H13 | 120.8° | 124.0° |
| CE | NZ | CX1 | CX2 | 108.4° | 155.0° |
| CE | NZ | CX1 | C1 | 132.7° | 85.0° |
| NZ | CE | CD | H9 | 8.2° | 60.0° |
| NZ | CE | CD | H10 | 126.5° | 60.0° |
| NZ | CE | H11 | H12 | 119.4° | 120.0° |
| CE | NZ | CX1 | H18 | 13.9° | 35.0° |
| NZ | CX1 | CX2 | O3 | 70.5° | 0.0° |
| NZ | CX1 | CX2 | C1 | 121.0° | 120.0° |
| NZ | CX1 | CX2 | H18 | 122.4° | 120.0° |
| NZ | CX1 | C1 | H18 | 119.1° | 120.0° |
| NZ | CX1 | CX2 | O2 | 112.1° | 180.0° |
| CX1 | NZ | CE | H11 | 3.7° | 60.0° |
| CX1 | NZ | CE | H12 | 123.3° | 60.0° |
| NZ | CX1 | C1 | H15 | 180.0° | 60.0° |
| NZ | CX1 | C1 | H16 | 60.0° | 59.9° |
| NZ | CX1 | C1 | H17 | 60.0° | 180.0° |
| O3 | CX2 | CX1 | O2 | 177.4° | 180.0° |
| O3 | CX2 | CX1 | C1 | 168.5° | 120.0° |
| O3 | CX2 | CX1 | H18 | 51.9° | 120.0° |
| O3 | CX2 | O2 | H19 | 0.0° | 0.1° |
| CX2 | CX1 | C1 | H18 | 116.8° | 120.0° |
| CX2 | CX1 | NZ | H13 | 12.4° | 31.0° |
| CX2 | CX1 | C1 | H15 | 56.0° | 60.0° |
| CX2 | CX1 | C1 | H16 | 64.1° | 180.0° |
| CX2 | CX1 | C1 | H17 | 175.9° | 60.0° |
| CX1 | CX2 | O2 | H19 | 177.2° | 180.0° |
| C1 | CX1 | CX2 | O2 | 8.9° | 60.0° |
| C1 | CX1 | NZ | H13 | 106.5° | 151.0° |
| CX1 | C1 | H15 | H16 | 120.0° | 120.0° |
| CX1 | C1 | H15 | H17 | 120.0° | 120.0° |
| CX1 | C1 | H16 | H17 | 120.0° | 120.0° |
| O2 | CX2 | CX1 | H18 | 125.5° | 59.9° |
| OXT | C | CA | HA | 18.2° | 40.0° |
| H | N | CA | HA | 59.7° | 56.1° |
| H2 | N | CA | HA | 179.7° | 180.0° |
| HA | CA | CB | H5 | 33.8° | 175.0° |
| HA | CA | CB | H6 | 153.3° | 65.1° |
| H5 | CB | CG | H7 | 142.3° | 180.0° |
| H5 | CB | CG | H8 | 99.4° | 60.0° |
| H6 | CB | CG | H7 | 22.7° | 60.0° |
| H6 | CB | CG | H8 | 141.0° | 180.0° |
| H7 | CG | CD | H9 | 102.2° | 180.0° |
| H7 | CG | CD | H10 | 139.4° | 60.0° |
| H8 | CG | CD | H9 | 16.1° | 60.0° |
| H8 | CG | CD | H10 | 102.3° | 180.0° |
| H9 | CD | CE | H11 | 112.0° | 179.9° |
| H9 | CD | CE | H12 | 128.3° | 60.0° |
| H10 | CD | CE | H11 | 6.4° | 60.0° |
| H10 | CD | CE | H12 | 113.3° | 180.0° |
| H11 | CE | NZ | H13 | 117.2° | 176.0° |
| H12 | CE | NZ | H13 | 2.5° | 64.0° |
| H13 | NZ | CX1 | H18 | 134.7° | 89.0° |
| H15 | C1 | H16 | H17 | 120.0° | 120.0° |
| H15 | C1 | CX1 | H18 | 60.9° | 180.0° |
| H16 | C1 | CX1 | H18 | 179.1° | 60.1° |
| H17 | C1 | CX1 | H18 | 59.1° | 60.0° |
