RER
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C1 | C2 | sing | 1.53Å | 1.50Å | |
| C1 | O5 | sing | 1.43Å | 1.33Å | |
| C1 | O1 | sing | 1.43Å | 1.58Å | |
| C2 | C3 | sing | 1.53Å | 1.52Å | |
| C3 | N3 | sing | 1.47Å | 1.54Å | |
| C3 | C3A | sing | 1.53Å | 1.45Å | |
| C3 | C4 | sing | 1.53Å | 1.49Å | |
| C4 | O4 | sing | 1.43Å | 1.50Å | |
| C4 | C5 | sing | 1.53Å | 1.52Å | |
| C5 | O5 | sing | 1.43Å | 1.45Å | |
| C5 | C5A | sing | 1.53Å | 1.52Å | |
| C1 | H1 | sing | 1.09Å | 1.10Å | |
| C2 | H21C | sing | 1.09Å | 1.10Å | |
| C2 | H22C | sing | 1.09Å | 1.10Å | |
| O1 | HO1 | sing | 0.97Å | 0.95Å | |
| N3 | H31N | sing | 1.01Å | 1.00Å | |
| N3 | H32N | sing | 1.01Å | 1.00Å | |
| C3A | H3A1 | sing | 1.09Å | 1.10Å | |
| C3A | H3A2 | sing | 1.09Å | 1.10Å | |
| C3A | H3A3 | sing | 1.09Å | 1.10Å | |
| C4 | H4 | sing | 1.09Å | 1.10Å | |
| O4 | HO4 | sing | 0.97Å | 0.95Å | |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C5A | H5A1 | sing | 1.09Å | 1.10Å | |
| C5A | H5A2 | sing | 1.09Å | 1.10Å | |
| C5A | H5A3 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | C1 | O5 | 123.5° | 109.4° |
| C2 | C1 | O1 | 100.9° | 109.5° |
| C1 | C2 | C3 | 108.9° | 109.2° |
| C2 | C1 | H1 | 106.1° | 109.5° |
| C1 | C2 | H21C | 109.6° | 109.6° |
| C1 | C2 | H22C | 109.8° | 109.5° |
| O5 | C1 | O1 | 108.8° | 109.5° |
| C1 | O5 | C5 | 113.6° | 114.1° |
| O5 | C1 | H1 | 97.8° | 109.5° |
| O1 | C1 | H1 | 121.5° | 109.5° |
| C1 | O1 | HO1 | 109.5° | 114.0° |
| C2 | C3 | N3 | 105.1° | 109.5° |
| C2 | C3 | C3A | 115.4° | 109.5° |
| C2 | C3 | C4 | 110.0° | 109.0° |
| C3 | C2 | H21C | 109.7° | 109.6° |
| C3 | C2 | H22C | 109.8° | 109.5° |
| N3 | C3 | C3A | 105.2° | 109.5° |
| N3 | C3 | C4 | 107.2° | 109.6° |
| C3 | N3 | H31N | 109.5° | 111.0° |
| C3 | N3 | H32N | 109.5° | 111.0° |
| C3A | C3 | C4 | 113.1° | 109.6° |
| C3 | C3A | H3A1 | 109.5° | 109.4° |
| C3 | C3A | H3A2 | 109.5° | 109.4° |
| C3 | C3A | H3A3 | 109.4° | 109.5° |
| C3 | C4 | O4 | 99.5° | 109.5° |
| C3 | C4 | C5 | 110.8° | 109.2° |
| C3 | C4 | H4 | 116.6° | 109.5° |
| O4 | C4 | C5 | 114.0° | 109.5° |
| O4 | C4 | H4 | 113.6° | 109.5° |
| C4 | O4 | HO4 | 109.5° | 114.0° |
| C4 | C5 | O5 | 105.6° | 109.4° |
| C4 | C5 | C5A | 115.5° | 109.5° |
| C5 | C4 | H4 | 102.8° | 109.6° |
| C4 | C5 | H5 | 107.1° | 109.4° |
| O5 | C5 | C5A | 106.4° | 109.5° |
| O5 | C5 | H5 | 116.1° | 109.5° |
| C5A | C5 | H5 | 106.4° | 109.5° |
| C5 | C5A | H5A1 | 109.5° | 109.4° |
| C5 | C5A | H5A2 | 109.5° | 109.5° |
| C5 | C5A | H5A3 | 109.5° | 109.5° |
| H21C | C2 | H22C | 109.1° | 109.5° |
| H31N | N3 | H32N | 109.5° | 110.9° |
| H3A1 | C3A | H3A2 | 109.5° | 109.5° |
| H3A1 | C3A | H3A3 | 109.4° | 109.4° |
| H3A2 | C3A | H3A3 | 109.5° | 109.6° |
| H5A1 | C5A | H5A2 | 109.5° | 109.4° |
| H5A1 | C5A | H5A3 | 109.4° | 109.4° |
| H5A2 | C5A | H5A3 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | C1 | O5 | O1 | 117.6° | 120.0° |
| C2 | C1 | O5 | H1 | 115.2° | 120.0° |
| C2 | C1 | O1 | H1 | 116.7° | 120.1° |
| C1 | C2 | C3 | H21C | 120.0° | 120.0° |
| C1 | C2 | C3 | H22C | 120.2° | 119.9° |
| C1 | C2 | C3 | N3 | 157.0° | 176.9° |
| C1 | C2 | C3 | C3A | 87.7° | 63.0° |
| C1 | C2 | C3 | C4 | 41.8° | 57.0° |
| C2 | C1 | O5 | C5 | 46.0° | 61.1° |
| C1 | C2 | H21C | H22C | 120.2° | 120.1° |
| C2 | C1 | O1 | HO1 | 27.7° | 180.0° |
| O5 | C1 | O1 | H1 | 112.1° | 120.0° |
| O5 | C1 | C2 | C3 | 37.2° | 57.6° |
| C1 | O5 | C5 | C4 | 55.7° | 61.1° |
| C1 | O5 | C5 | C5A | 179.0° | 178.9° |
| O5 | C1 | C2 | H21C | 82.8° | 62.4° |
| O5 | C1 | C2 | H22C | 157.4° | 177.5° |
| O5 | C1 | O1 | HO1 | 158.8° | 60.1° |
| C1 | O5 | C5 | H5 | 62.8° | 58.8° |
| O1 | C1 | C2 | C3 | 84.1° | 62.3° |
| O1 | C1 | O5 | C5 | 71.6° | 58.8° |
| O1 | C1 | C2 | H21C | 156.0° | 177.7° |
| O1 | C1 | C2 | H22C | 36.1° | 57.5° |
| C2 | C3 | N3 | C3A | 122.3° | 120.2° |
| C2 | C3 | N3 | C4 | 117.1° | 119.6° |
| C2 | C3 | C3A | C4 | 128.0° | 119.6° |
| C2 | C3 | C4 | O4 | 60.0° | 62.9° |
| C2 | C3 | C4 | C5 | 60.3° | 56.9° |
| C3 | C2 | C1 | H1 | 148.4° | 177.6° |
| C3 | C2 | H21C | H22C | 120.2° | 120.1° |
| C2 | C3 | N3 | H31N | 110.5° | 60.1° |
| C2 | C3 | N3 | H32N | 9.5° | 176.1° |
| C2 | C3 | C3A | H3A1 | 72.5° | 69.7° |
| C2 | C3 | C3A | H3A2 | 167.5° | 170.3° |
| C2 | C3 | C3A | H3A3 | 47.5° | 50.2° |
| C2 | C3 | C4 | H4 | 177.4° | 177.0° |
| N3 | C3 | C3A | C4 | 116.7° | 120.2° |
| N3 | C3 | C4 | O4 | 53.8° | 56.9° |
| N3 | C3 | C4 | C5 | 174.1° | 176.8° |
| N3 | C3 | C2 | H21C | 37.0° | 56.9° |
| N3 | C3 | C2 | H22C | 82.8° | 63.3° |
| C3 | N3 | H31N | H32N | 120.0° | 123.9° |
| N3 | C3 | C3A | H3A1 | 172.2° | 170.1° |
| N3 | C3 | C3A | H3A2 | 52.2° | 50.1° |
| N3 | C3 | C3A | H3A3 | 67.8° | 70.0° |
| N3 | C3 | C4 | H4 | 68.8° | 63.2° |
| C3A | C3 | C4 | O4 | 169.2° | 177.2° |
| C3A | C3 | C4 | C5 | 70.5° | 63.0° |
| C3A | C3 | C2 | H21C | 152.4° | 177.1° |
| C3A | C3 | C2 | H22C | 32.5° | 56.9° |
| C3A | C3 | N3 | H31N | 127.2° | 60.1° |
| C3A | C3 | N3 | H32N | 112.8° | 63.7° |
| C3 | C3A | H3A1 | H3A2 | 120.0° | 119.9° |
| C3 | C3A | H3A1 | H3A3 | 120.0° | 120.0° |
| C3 | C3A | H3A2 | H3A3 | 120.0° | 120.0° |
| C3A | C3 | C4 | H4 | 46.7° | 57.1° |
| C3 | C4 | O4 | C5 | 118.0° | 119.7° |
| C3 | C4 | O4 | H4 | 124.7° | 120.1° |
| C3 | C4 | C5 | H4 | 125.4° | 120.0° |
| C3 | C4 | C5 | O5 | 65.4° | 57.6° |
| C3 | C4 | C5 | C5A | 177.4° | 177.6° |
| C4 | C3 | C2 | H21C | 78.2° | 63.0° |
| C4 | C3 | C2 | H22C | 162.0° | 176.8° |
| C4 | C3 | N3 | H31N | 6.6° | 179.6° |
| C4 | C3 | N3 | H32N | 126.6° | 56.5° |
| C4 | C3 | C3A | H3A1 | 55.5° | 49.8° |
| C4 | C3 | C3A | H3A2 | 64.5° | 70.1° |
| C4 | C3 | C3A | H3A3 | 175.5° | 169.8° |
| C3 | C4 | O4 | HO4 | 65.0° | 179.9° |
| C3 | C4 | C5 | H5 | 59.0° | 62.4° |
| O4 | C4 | C5 | H4 | 123.4° | 120.2° |
| O4 | C4 | C5 | O5 | 45.9° | 62.3° |
| O4 | C4 | C5 | C5A | 71.4° | 57.7° |
| O4 | C4 | C5 | H5 | 170.3° | 177.7° |
| C4 | C5 | O5 | C5A | 123.2° | 120.0° |
| C4 | C5 | O5 | H5 | 118.6° | 119.9° |
| C4 | C5 | C5A | H5 | 118.8° | 120.0° |
| C5 | C4 | O4 | HO4 | 177.0° | 60.4° |
| C4 | C5 | C5A | H5A1 | 161.9° | 60.0° |
| C4 | C5 | C5A | H5A2 | 78.1° | 179.9° |
| C4 | C5 | C5A | H5A3 | 41.9° | 60.0° |
| O5 | C5 | C5A | H5 | 124.4° | 120.1° |
| C5 | O5 | C1 | H1 | 161.3° | 178.9° |
| O5 | C5 | C4 | H4 | 169.3° | 177.5° |
| O5 | C5 | C5A | H5A1 | 81.3° | 179.9° |
| O5 | C5 | C5A | H5A2 | 38.7° | 60.1° |
| O5 | C5 | C5A | H5A3 | 158.8° | 60.0° |
| C5A | C5 | C4 | H4 | 52.1° | 62.4° |
| C5 | C5A | H5A1 | H5A2 | 120.0° | 120.0° |
| C5 | C5A | H5A1 | H5A3 | 120.0° | 120.0° |
| C5 | C5A | H5A2 | H5A3 | 120.0° | 120.1° |
| H1 | C1 | C2 | H21C | 28.4° | 57.6° |
| H1 | C1 | C2 | H22C | 91.4° | 62.6° |
| H1 | C1 | O1 | HO1 | 89.0° | 59.9° |
| H3A1 | C3A | H3A2 | H3A3 | 120.0° | 120.0° |
| H4 | C4 | O4 | HO4 | 59.7° | 59.8° |
| H4 | C4 | C5 | H5 | 66.3° | 57.6° |
| H5 | C5 | C5A | H5A1 | 43.1° | 60.0° |
| H5 | C5 | C5A | H5A2 | 163.1° | 60.0° |
| H5 | C5 | C5A | H5A3 | 76.8° | 180.0° |
| H5A1 | C5A | H5A2 | H5A3 | 120.0° | 120.0° |
