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SummaryGeometryRelated PDB entries

RDU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O01C02sing1.43Å1.37Å
C02C03sing1.53Å1.56Å
O22C03sing1.43Å1.36Å
O22C21sing1.43Å1.36Å
C03C04sing1.53Å1.60Å
C25C21sing1.53Å1.57Å
C25C24sing1.54Å1.54Å
C21C23sing1.53Å1.58Å
C21C20sing1.53Å1.55Å
C24C23sing1.54Å1.51Å
C04N05sing1.47Å1.49Å
C20N05sing1.47Å1.50Å
N05C06sing1.38Å1.48Å
C13C12doub1.38Å1.39ÅAromatic
C13C08sing1.39Å1.42ÅAromatic
C12C11sing1.39Å1.39ÅAromatic
C06C07doub1.40Å1.48ÅAromatic
C06N19sing1.33Å1.36ÅAromatic
C08C07sing1.47Å1.51ÅAromatic
C08C09doub1.40Å1.44ÅAromatic
C07C16sing1.40Å1.44ÅAromatic
N19C18doub1.32Å1.36ÅAromatic
C11F14sing1.35Å1.35Å
C11C10doub1.38Å1.38ÅAromatic
C09C10sing1.39Å1.40ÅAromatic
C09N15sing1.38Å1.40ÅAromatic
C18N17sing1.32Å1.33ÅAromatic
C16N15sing1.37Å1.39ÅAromatic
C16N17doub1.33Å1.36ÅAromatic
C18H181sing1.08Å1.08Å
C13H131sing1.08Å1.08Å
C12H121sing1.08Å1.08Å
C10H101sing1.08Å1.08Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C02H022sing1.09Å1.10Å
C02H021sing1.09Å1.10Å
C03H031sing1.09Å1.10Å
C04H042sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C23H231sing1.09Å1.10Å
C23H232sing1.09Å1.10Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
N15H151sing0.97Å1.00Å
O01H011sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O01C02C03109.8°109.5°
O01C02H022109.4°109.5°
O01C02H021109.4°109.5°
C02O01H011109.5°114.0°
C02C03O22103.3°109.5°
C02C03C04109.5°109.5°
C03C02H022109.4°109.4°
C03C02H021109.4°109.5°
C02C03H031108.9°109.5°
C03O22C21120.3°113.4°
O22C03C04114.6°109.3°
O22C03H031111.8°109.5°
O22C21C25113.1°113.5°
O22C21C23107.2°113.6°
O22C21C20111.7°112.8°
C03C04N05117.4°109.6°
C04C03H031108.5°109.5°
C03C04H042107.4°109.5°
C03C04H041107.5°109.4°
C21C25C2491.4°86.9°
C25C21C2386.0°87.5°
C25C21C20122.7°113.5°
C21C25H251113.8°113.6°
C21C25H252113.8°113.6°
C25C24C2389.5°87.2°
C25C24H241114.2°113.6°
C25C24H242114.2°113.6°
C24C25H251113.8°113.6°
C24C25H252113.8°113.6°
C23C21C20112.6°113.5°
C21C23C2492.4°86.9°
C21C23H231113.6°113.6°
C21C23H232113.6°113.6°
C21C20N05115.0°109.0°
C21C20H201108.1°109.6°
C21C20H202108.1°109.6°
C24C23H231113.5°113.6°
C24C23H232113.5°113.7°
C23C24H241114.2°113.6°
C23C24H242114.2°113.6°
C04N05C20112.0°110.7°
C04N05C06120.7°111.0°
N05C04H042107.5°109.5°
N05C04H041107.4°109.5°
C20N05C06116.6°111.0°
N05C20H201108.1°109.5°
N05C20H202108.1°109.6°
N05C06C07124.7°120.8°
N05C06N19116.5°120.7°
C12C13C08124.0°119.9°
C13C12C11118.2°120.2°
C12C13H131118.0°120.0°
C13C12H121120.9°119.9°
C13C08C07138.7°133.7°
C13C08C09113.9°120.1°
C08C13H131118.0°120.1°
C12C11F14117.8°119.7°
C12C11C10122.9°120.5°
C11C12H121120.9°119.9°
C07C06N19118.8°118.5°
C06C07C08142.1°134.6°
C06C07C16113.6°118.8°
C06N19C18119.9°120.9°
C07C08C09107.4°106.2°
C08C07C16104.3°106.6°
C08C09C10123.6°119.3°
C08C09N15107.8°108.3°
C07C16N15110.4°108.4°
C07C16N17126.2°118.4°
N19C18N17127.1°122.6°
N19C18H181116.4°118.7°
F14C11C10119.3°119.8°
C11C10C09117.2°120.1°
C11C10H101121.4°120.0°
C10C09N15128.5°132.3°
C09C10H101121.4°119.9°
C09N15C16110.1°110.4°
C09N15H151124.9°124.8°
C18N17C16114.3°120.8°
N17C18H181116.5°118.7°
N15C16N17123.4°133.1°
C16N15H151125.0°124.8°
H201C20H202109.5°109.5°
H022C02H021109.5°109.5°
H042C04H041109.5°109.4°
H231C23H232109.5°113.0°
H241C24H242109.4°112.9°
H251C25H252109.5°113.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C02C03H022120.0°120.0°
O01C02C03H021120.1°120.0°
O01C02C03O22160.2°65.2°
O01C02C03C0477.2°175.0°
O01C02H022H021119.9°120.0°
O01C02C03H03141.2°54.9°
C02C03O22C04119.1°120.0°
C02C03O22H031116.9°120.1°
C02C03O22C21110.2°176.2°
C02C03C04H031118.7°120.1°
C02C03C04N05147.4°178.6°
C03C02H022H021119.8°120.0°
C02C03C04H04291.4°61.4°
C02C03C04H04126.3°58.5°
C03C02O01H011180.0°180.0°
O22C03C04H031125.7°120.0°
C03O22C21C25166.5°76.4°
C03O22C21C2373.4°174.4°
C03O22C21C2050.3°54.6°
O22C03C04N0531.9°58.6°
O22C03C02H02279.8°54.8°
O22C03C02H02140.1°174.8°
O22C03C04H042153.1°178.7°
O22C03C04H04189.2°61.4°
C21O22C03C048.8°56.2°
O22C21C25C23107.0°114.8°
O22C21C25C20138.7°130.6°
O22C21C25C24113.0°140.0°
O22C21C23C20123.1°130.7°
O22C21C23C24119.1°139.9°
O22C21C20N0554.1°53.0°
O22C21C20H201175.0°66.9°
O22C21C20H20266.6°172.9°
C21O22C03H031132.8°63.7°
O22C21C23H231123.9°105.6°
O22C21C23H2322.1°25.4°
O22C21C25H2513.8°25.5°
O22C21C25H252130.1°105.6°
C03C04N05H042121.1°120.1°
C03C04N05H041121.1°120.0°
C03C04N05C2025.2°60.2°
C03C04N05C06168.5°176.0°
C04C03C02H02242.8°65.0°
C04C03C02H021162.7°55.0°
C03C04H042H041116.4°119.9°
C21C25C24H251116.8°114.5°
C21C25C24H252116.8°114.5°
C25C21C23C20123.9°114.6°
C21C25C24C236.3°25.2°
C25C21C20N05166.7°78.0°
C25C21C20H20145.8°162.2°
C25C21C20H20272.6°41.9°
C25C21C23H231123.1°139.7°
C25C21C23H232110.9°89.3°
C21C25C24H241122.8°89.4°
C21C25C24H242110.2°139.7°
C21C25H251H252128.5°131.4°
C24C25C21C20108.3°89.4°
C25C24C23H241116.5°114.6°
C25C24C23H242116.5°114.6°
C25C24C23H231123.3°139.7°
C25C24C23H232110.8°89.3°
C25C24H241H242129.5°131.3°
C24C25H251H252128.6°131.3°
C21C23C24H231117.0°114.5°
C21C23C24H232117.0°114.4°
C23C21C20N0566.4°175.9°
C23C21C20H20154.4°64.2°
C23C21C20H202172.8°56.0°
C21C23H231H232128.1°131.3°
C21C23C24H241122.7°89.4°
C21C23C24H242110.2°139.7°
C23C21C25H251110.8°89.2°
C23C21C25H252122.9°139.7°
C20C21C23C24117.7°89.4°
C21C20N05C0414.9°56.4°
C21C20N05H201120.8°119.9°
C21C20N05H202120.8°119.9°
C21C20N05C06130.1°179.9°
C21C20H201H202117.5°120.3°
C20C21C23H2310.7°25.1°
C20C21C23H232125.2°156.0°
C20C21C25H251134.8°156.1°
C20C21C25H2528.5°25.0°
C24C23H231H232128.1°131.4°
C23C24H241H242129.5°131.1°
C23C24C25H251110.6°89.4°
C23C24C25H252123.1°139.6°
C04N05C20C06145.0°123.8°
C04N05C06C070.4°115.4°
C04N05C06N19178.9°63.8°
C04N05C20H201135.7°63.6°
C04N05C20H202105.9°176.3°
N05C04C03H03193.8°61.4°
N05C04H042H041116.4°120.0°
C20N05C06C07142.2°121.0°
C20N05C06N1937.1°59.8°
N05C20H201H202117.5°120.2°
C20N05C04H042146.3°179.7°
C20N05C04H04196.0°59.8°
N05C06C07N19179.3°179.2°
N05C06C07C080.9°0.7°
N05C06C07C16179.7°180.0°
N05C06N19C18179.6°179.8°
C06N05C20H2019.3°60.2°
C06N05C20H202109.1°59.9°
C06N05C04H04270.3°55.9°
C06N05C04H04147.4°64.0°
C12C13C08H131180.0°179.9°
C13C12C11H121180.0°179.9°
C12C13C08C07180.0°180.0°
C12C13C08C090.1°0.1°
C13C12C11F14179.8°180.0°
C13C12C11C100.4°0.1°
C08C13C12C110.3°0.1°
C13C08C07C060.4°0.0°
C13C08C07C09179.9°179.9°
C13C08C07C16179.9°179.3°
C13C08C09C100.5°0.0°
C13C08C09N15179.9°178.9°
C08C13C12H121179.7°180.0°
C12C11F14C10179.8°180.0°
C12C11C10C090.1°0.0°
C11C12C13H131179.7°180.0°
C12C11C10H101179.9°179.9°
C06C07C08C16179.5°179.4°
C06C07C08C09179.4°180.0°
C07C06N19C180.2°0.5°
C06C07C16N15179.7°179.4°
C06C07C16N170.4°0.5°
N19C06C07C08179.9°180.0°
N19C06C07C160.4°0.7°
C06N19C18N170.0°0.0°
C06N19C18H181180.0°179.8°
C07C08C09C10179.6°180.0°
C07C08C09N150.2°1.0°
C08C07C16N150.1°0.0°
C08C07C16N17180.0°179.9°
C07C08C13H1310.0°0.1°
C09C08C07C160.0°0.6°
C08C09C10C110.4°0.0°
C08C09C10N15179.3°178.6°
C08C09N15C160.2°1.1°
C09C08C13H131179.9°180.0°
C08C09C10H101179.6°180.0°
C08C09N15H151179.8°179.6°
C07C16N15C090.2°0.7°
C07C16N17C180.2°0.0°
C07C16N15N17179.9°179.9°
C07C16N15H151179.8°180.0°
N19C18N17H181180.0°179.8°
N19C18N17C160.0°0.2°
F14C11C10C09179.9°180.0°
F14C11C12H1210.2°0.1°
F14C11C10H1010.1°0.0°
C11C10C09H101180.0°179.9°
C11C10C09N15179.7°178.7°
C10C11C12H121179.6°180.0°
C10C09N15C16179.6°179.8°
C10C09N15H1510.4°0.9°
C09N15C16H151180.0°179.3°
C09N15C16N17179.9°179.4°
N15C09C10H1010.3°1.4°
C18N17C16N15180.0°179.9°
C16N17C18H181180.0°180.0°
N17C16N15H1510.1°0.1°
H131C13C12H1210.3°0.1°
H022C02C03H031161.3°174.9°
H022C02O01H01160.0°60.0°
H021C02C03H03178.8°65.1°
H021C02O01H01159.9°60.0°
H031C03C04H04227.3°58.7°
H031C03C04H041145.1°178.6°
H231C23C24H241120.3°25.1°
H231C23C24H2426.8°105.8°
H232C23C24H2415.7°156.1°
H232C23C24H242132.7°25.3°
H241C24C25H2515.9°156.1°
H241C24C25H252120.4°25.1°
H242C24C25H251133.0°25.2°
H242C24C25H2526.6°105.8°

250059

PDB entries from 2026-03-04

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