Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

RC8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2C2sing1.38Å1.34Å
N3C2doub1.32Å1.35ÅAromatic
C2N1sing1.33Å1.35ÅAromatic
N3C4sing1.33Å1.35ÅAromatic
N9C4sing1.37Å1.32ÅAromatic
C4C5doub1.40Å1.46ÅAromatic
C5C6sing1.41Å1.48ÅAromatic
C5N7sing1.36Å1.34ÅAromatic
N1C6doub1.33Å1.35ÅAromatic
C6N6sing1.38Å1.34Å
N9C8sing1.36Å1.34ÅAromatic
C8N7doub1.30Å1.36ÅAromatic
C8H8sing1.08Å1.08Å
C10C9sing1.53Å1.58Å
C9N9sing1.47Å1.48Å
C9C11sing1.53Å1.58Å
C9H9sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C10H10Bsing1.09Å1.10Å
C13C12sing1.53Å1.54Å
C12C15sing1.53Å1.53Å
C12N2sing1.47Å1.45Å
C12H12sing1.09Å1.10Å
C14C13sing1.53Å1.51Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C14H14Bsing1.09Å1.10Å
C15O1sing1.43Å1.44Å
O1HO1sing0.97Å0.95Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
N2HN2sing0.97Å1.00Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C11H11Bsing1.09Å1.10Å
CA'N6sing1.46Å1.45Å
N6HN6sing0.97Å1.00Å
CA'C1'sing1.51Å1.51Å
CA'HA'sing1.09Å1.10Å
CA'HA'Asing1.09Å1.10Å
C6'C1'doub1.38Å1.39ÅAromatic
C1'C2'sing1.38Å1.40ÅAromatic
C6'C5'sing1.38Å1.39ÅAromatic
C6'H6'sing1.08Å1.08Å
C5'C4'doub1.39Å1.40ÅAromatic
C5'H5'sing1.08Å1.08Å
C4'C3'sing1.39Å1.39ÅAromatic
C4'C1Bsing1.48Å1.49ÅAromatic
C2'C3'doub1.38Å1.38ÅAromatic
C3'H3'sing1.08Å1.08Å
C2'H2'sing1.08Å1.08Å
C2BC1Bdoub1.39Å1.40ÅAromatic
C1BN1Bsing1.33Å1.35ÅAromatic
N1BC5Bdoub1.32Å1.34ÅAromatic
C4BC5Bsing1.38Å1.39ÅAromatic
C5BH5Bsing1.08Å1.08Å
C3BC4Bdoub1.39Å1.40ÅAromatic
C4BH4Bsing1.08Å1.08Å
C2BC3Bsing1.38Å1.39ÅAromatic
C3BH3Bsing1.08Å1.08Å
C2BH2Bsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2C2N3118.5°118.8°
N2C2N1119.1°118.9°
C2N2C12118.7°120.0°
C2N2HN2106.5°120.1°
N3C2N1122.5°122.3°
C2N3C4121.0°120.6°
C2N1C6122.0°121.1°
N3C4N9132.9°134.8°
N3C4C5120.1°119.1°
N9C4C5107.0°106.0°
C4N9C8109.4°107.5°
C4N9C9120.0°126.2°
C4C5C6116.0°118.3°
C4C5N7105.6°107.2°
C6C5N7138.4°134.5°
C5C6N1118.5°118.6°
C5C6N6122.3°120.7°
C5N7C8108.5°109.4°
N1C6N6119.2°120.7°
C6N6CA'118.2°120.0°
C6N6HN6106.7°120.0°
N9C8N7109.5°110.0°
N9C8H8125.3°125.0°
C8N9C9130.6°126.3°
N7C8H8125.3°125.0°
C10C9N9114.6°109.5°
C10C9C11112.7°109.4°
C10C9H9106.1°109.5°
C9C10H10109.5°109.4°
C9C10H10A109.5°109.5°
C9C10H10B109.5°109.5°
N9C9C11116.3°109.5°
N9C9H9101.4°109.5°
C11C9H9103.8°109.5°
C9C11H11109.5°109.5°
C9C11H11A109.5°109.4°
C9C11H11B109.5°109.5°
H10C10H10A109.5°109.5°
H10C10H10B109.4°109.4°
H10AC10H10B109.5°109.5°
C13C12C15111.6°109.5°
C13C12N2109.9°109.4°
C13C12H12107.5°109.5°
C12C13C14111.9°109.5°
C12C13H13108.7°109.4°
C12C13H13A108.1°109.5°
C15C12N2108.6°109.5°
C15C12H12108.8°109.5°
C12C15O1109.4°109.5°
C12C15H15109.5°109.5°
C12C15H15A109.5°109.5°
N2C12H12110.5°109.4°
C12N2HN2106.5°120.0°
C13C14H14109.5°109.5°
C13C14H14A109.4°109.4°
C13C14H14B109.5°109.4°
C14C13H13108.7°109.5°
C14C13H13A108.1°109.5°
H14C14H14A109.5°109.5°
H14C14H14B109.4°109.5°
H14AC14H14B109.5°109.4°
C15O1HO1109.5°114.0°
O1C15H15109.5°109.5°
O1C15H15A109.5°109.5°
H15C15H15A109.4°109.5°
H13C13H13A111.4°109.5°
H11C11H11A109.5°109.5°
H11C11H11B109.4°109.5°
H11AC11H11B109.5°109.5°
CA'N6HN6106.7°120.0°
N6CA'C1'108.1°109.5°
N6CA'HA'109.9°109.5°
N6CA'HA'A110.2°109.5°
C1'CA'HA'109.9°109.5°
C1'CA'HA'A110.2°109.4°
CA'C1'C6'120.1°119.8°
CA'C1'C2'119.1°119.9°
HA'CA'HA'A108.4°109.4°
C6'C1'C2'120.9°120.3°
C1'C6'C5'119.0°120.1°
C1'C6'H6'120.5°120.0°
C1'C2'C3'120.0°120.1°
C1'C2'H2'120.0°120.0°
C5'C6'H6'120.5°120.0°
C6'C5'C4'120.3°119.9°
C6'C5'H5'119.8°120.1°
C4'C5'H5'119.9°120.0°
C5'C4'C3'120.1°119.7°
C5'C4'C1B120.9°120.1°
C3'C4'C1B119.0°120.1°
C4'C3'C2'119.7°119.9°
C4'C3'H3'120.2°120.0°
C4'C1BC2B120.1°119.7°
C4'C1BN1B119.3°119.7°
C2'C3'H3'120.1°120.1°
C3'C2'H2'120.0°119.9°
C2BC1BN1B120.6°120.5°
C1BC2BC3B118.8°119.1°
C1BC2BH2B120.6°120.5°
C1BN1BC5B121.5°121.6°
N1BC5BC4B120.1°120.8°
N1BC5BH5B119.9°119.6°
C4BC5BH5B120.0°119.5°
C5BC4BC3B119.8°119.4°
C5BC4BH4B120.1°120.3°
C3BC4BH4B120.1°120.3°
C4BC3BC2B119.2°118.5°
C4BC3BH3B120.4°120.7°
C2BC3BH3B120.4°120.8°
C3BC2BH2B120.6°120.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2C2N3N1179.8°179.7°
N2C2N3C4179.7°179.7°
N2C2N1C6180.0°180.0°
C2N2C12C1399.1°155.0°
C2N2C12C15138.6°85.0°
C2N2C12HN2120.0°180.0°
C2N2C12H1219.4°35.0°
C2N3C4N9179.4°179.7°
C2N3C4C50.4°0.0°
N3C2N1C60.2°0.3°
N3C2N2C1210.1°179.7°
N3C2N2HN2109.9°0.3°
N1C2N3C40.1°0.1°
C2N1C6C50.2°0.5°
C2N1C6N6180.0°179.9°
N1C2N2C12169.7°0.1°
N1C2N2HN270.2°180.0°
N3C4N9C5179.8°179.7°
N3C4C5C60.3°0.3°
N3C4C5N7180.0°179.7°
N3C4N9C8179.9°179.7°
N3C4N9C90.8°0.3°
N9C4C5C6179.6°180.0°
N9C4C5N70.1°0.0°
C4N9C8C9179.0°180.0°
C4N9C8N70.0°0.1°
C4N9C8H8179.9°180.0°
C4N9C9C10114.9°120.0°
C4N9C9C11110.7°120.1°
C4N9C9H91.1°0.0°
C4C5C6N7179.6°180.0°
C4C5C6N10.0°0.5°
C4C5C6N6179.8°180.0°
C5C4N9C80.1°0.0°
C4C5N7C80.1°0.0°
C5C4N9C9179.0°180.0°
C5C6N1N6179.8°179.5°
C6C5N7C8179.5°180.0°
C5C6N6CA'160.9°180.0°
C5C6N6HN679.1°0.0°
N7C5C6N1179.6°179.5°
N7C5C6N60.2°0.0°
C5N7C8N90.0°0.1°
C5N7C8H8180.0°180.0°
N1C6N6CA'18.9°0.5°
N1C6N6HN6101.1°179.5°
C6N6CA'HN6120.0°180.0°
C6N6CA'C1'104.1°180.0°
C6N6CA'HA'135.9°60.0°
C6N6CA'HA'A16.4°60.0°
N9C8N7H8180.0°180.0°
C8N9C9C1064.0°59.9°
C8N9C9C1170.4°60.0°
C8N9C9H9177.8°180.0°
N7C8N9C9179.0°180.0°
H8C8N9C91.0°0.0°
C10C9N9C11134.4°119.9°
C10C9N9H9113.8°120.0°
C10C9C11H9114.4°120.0°
C9C10H10H10A120.0°120.0°
C9C10H10H10B120.0°119.9°
C9C10H10AH10B120.0°120.0°
C10C9C11H1146.1°60.0°
C10C9C11H11A73.9°60.0°
C10C9C11H11B166.1°180.0°
N9C9C11H9110.4°120.0°
N9C9C10H10107.0°60.0°
N9C9C10H10A13.0°180.0°
N9C9C10H10B133.0°59.9°
N9C9C11H11178.7°60.0°
N9C9C11H11A61.3°180.0°
N9C9C11H11B58.7°60.0°
C11C9C10H10117.0°180.0°
C11C9C10H10A123.0°60.0°
C11C9C10H10B3.0°60.0°
C9C11H11H11A120.0°120.0°
C9C11H11H11B120.0°120.0°
C9C11H11AH11B120.0°120.0°
H9C9C10H104.0°60.0°
H9C9C10H10A124.0°60.0°
H9C9C10H10B115.9°180.0°
H9C9C11H1168.2°180.0°
H9C9C11H11A171.7°60.0°
H9C9C11H11B51.7°60.0°
H10C10H10AH10B120.0°120.0°
C13C12C15N2121.3°120.0°
C13C12C15H12118.4°120.1°
C13C12N2H12118.4°120.0°
C12C13C14H13120.0°119.9°
C12C13C14H13A119.0°120.0°
C12C13C14H14150.6°60.0°
C12C13C14H14A89.4°180.0°
C12C13C14H14B30.6°60.1°
C13C12C15O1111.0°55.0°
C13C12C15H159.0°65.0°
C13C12C15H15A128.9°175.0°
C12C13H13H13A119.0°120.0°
C13C12N2HN2140.9°25.0°
C15C12N2H12119.3°120.0°
C15C12C13C14130.0°175.0°
C12C15O1H15120.0°120.0°
C12C15O1H15A120.0°120.0°
C12C15O1HO156.8°180.0°
C12C15H15H15A120.0°120.0°
C15C12C13H1310.0°55.0°
C15C12C13H13A111.1°65.0°
C15C12N2HN218.6°95.0°
N2C12C13C14109.5°65.0°
N2C12C15O110.2°65.0°
N2C12C15H15130.3°175.0°
N2C12C15H15A109.8°55.0°
N2C12C13H13130.5°175.0°
N2C12C13H13A9.4°55.0°
H12C12C13C1410.8°54.9°
H12C12C15O1130.6°175.0°
H12C12C15H15109.4°55.0°
H12C12C15H15A10.5°65.0°
H12C12C13H13109.2°65.0°
H12C12C13H13A129.7°175.0°
H12C12N2HN2100.6°145.0°
C13C14H14H14A120.0°120.0°
C13C14H14H14B120.0°120.0°
C13C14H14AH14B120.0°119.9°
C14C13H13H13A119.0°120.0°
H14C14H14AH14B120.0°120.1°
H14C14C13H1330.6°60.0°
H14C14C13H13A90.4°180.0°
H14AC14C13H13150.6°60.1°
H14AC14C13H13A29.6°60.0°
H14BC14C13H1389.4°180.0°
H14BC14C13H13A149.6°60.0°
O1C15H15H15A120.0°120.0°
HO1O1C15H15176.8°60.0°
HO1O1C15H15A63.3°60.1°
H11C11H11AH11B120.0°120.0°
N6CA'C1'HA'120.0°120.0°
N6CA'C1'HA'A120.5°120.0°
N6CA'HA'HA'A120.6°120.0°
N6CA'C1'C6'135.7°89.7°
N6CA'C1'C2'44.1°90.0°
HN6N6CA'C1'15.9°0.0°
HN6N6CA'HA'104.1°120.0°
HN6N6CA'HA'A136.4°120.0°
C1'CA'HA'HA'A120.5°119.9°
CA'C1'C6'C2'179.8°179.7°
CA'C1'C6'C5'179.9°180.0°
CA'C1'C6'H6'0.1°0.0°
CA'C1'C2'C3'179.9°179.7°
CA'C1'C2'H2'0.1°0.1°
HA'CA'C1'C6'104.3°150.3°
HA'CA'C1'C2'75.9°30.1°
HA'ACA'C1'C6'15.1°30.3°
HA'ACA'C1'C2'164.7°150.0°
C1'C6'C5'H6'180.0°180.0°
C1'C6'C5'C4'0.5°0.1°
C1'C6'C5'H5'179.5°180.0°
C6'C1'C2'C3'0.0°0.6°
C6'C1'C2'H2'180.0°179.7°
C2'C1'C6'C5'0.3°0.3°
C2'C1'C6'H6'179.7°179.7°
C1'C2'C3'C4'0.1°0.6°
C1'C2'C3'H2'180.0°179.6°
C1'C2'C3'H3'180.0°179.7°
C6'C5'C4'H5'180.0°179.9°
C6'C5'C4'C3'0.4°0.1°
C6'C5'C4'C1B179.7°180.0°
H6'C6'C5'C4'179.6°179.9°
H6'C6'C5'H5'0.5°0.0°
C5'C4'C3'C1B180.0°180.0°
C5'C4'C3'C2'0.1°0.3°
C5'C4'C3'H3'179.9°180.0°
C5'C4'C1BC2B14.4°179.7°
C5'C4'C1BN1B165.8°0.0°
H5'C5'C4'C3'179.6°180.0°
H5'C5'C4'C1B0.4°0.0°
C4'C3'C2'H3'180.0°179.7°
C4'C3'C2'H2'179.9°179.8°
C3'C4'C1BC2B165.7°0.3°
C3'C4'C1BN1B14.2°180.0°
C1BC4'C3'C2'179.9°179.7°
C1BC4'C3'H3'0.1°0.0°
C4'C1BC2BN1B179.9°179.7°
C4'C1BN1BC5B179.7°180.0°
C4'C1BC2BC3B179.7°179.7°
C4'C1BC2BH2B0.3°0.1°
H3'C3'C2'H2'0.1°0.0°
C2BC1BN1BC5B0.4°0.3°
C1BC2BC3BC4B0.3°0.5°
C1BC2BC3BH2B180.0°179.7°
C1BC2BC3BH3B179.7°179.7°
C1BN1BC5BC4B0.4°0.0°
C1BN1BC5BH5B179.6°180.0°
N1BC1BC2BC3B0.4°0.6°
N1BC1BC2BH2B179.6°179.8°
N1BC5BC4BH5B180.0°180.0°
N1BC5BC4BC3B0.3°0.0°
N1BC5BC4BH4B179.7°180.0°
C5BC4BC3BH4B180.0°180.0°
C5BC4BC3BC2B0.2°0.3°
C5BC4BC3BH3B179.7°180.0°
H5BC5BC4BC3B179.7°180.0°
H5BC5BC4BH4B0.3°0.0°
C4BC3BC2BH3B180.0°179.7°
C4BC3BC2BH2B179.7°179.8°
H4BC4BC3BC2B179.8°179.7°
H4BC4BC3BH3B0.2°0.0°
H3BC3BC2BH2B0.3°0.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon