RBZ

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N3	C2	doub	1.30Å	1.34Å	Aromatic
N3	C3A	sing	1.36Å	1.38Å	Aromatic
N1	C2	sing	1.36Å	1.37Å	Aromatic
N1	C7A	sing	1.38Å	1.43Å	Aromatic
N1	C1'	sing	1.46Å	1.51Å
C2	H2	sing	1.08Å	1.10Å
C7A	C3A	doub	1.41Å	1.42Å	Aromatic
C7A	C7	sing	1.39Å	1.44Å	Aromatic
C3A	C4	sing	1.40Å	1.43Å	Aromatic
C4	C5	doub	1.37Å	1.42Å	Aromatic
C4	H4	sing	1.08Å	1.10Å
C5	C6	sing	1.39Å	1.47Å	Aromatic
C5	C8	sing	1.51Å	1.53Å
C6	C7	doub	1.38Å	1.42Å	Aromatic
C6	C9	sing	1.51Å	1.52Å
C7	H7	sing	1.08Å	1.10Å
C8	H81	sing	1.09Å	1.12Å
C8	H82	sing	1.09Å	1.12Å
C8	H83	sing	1.09Å	1.11Å
C9	H91	sing	1.09Å	1.12Å
C9	H92	sing	1.09Å	1.12Å
C9	H93	sing	1.09Å	1.11Å
P	O1P	doub	1.48Å	1.51Å
P	O2P	sing	1.61Å	1.49Å
P	O3P	sing	1.61Å	1.48Å
P	O5'	sing	1.61Å	1.59Å
O2P	HOP2	sing	0.97Å	0.95Å
O3P	HOP3	sing	0.97Å	0.95Å
O5'	C5'	sing	1.43Å	1.44Å
C5'	C4'	sing	1.53Å	1.53Å
C5'	H5'1	sing	1.09Å	1.11Å
C5'	H5'2	sing	1.09Å	1.11Å
C4'	O4'	sing	1.44Å	1.47Å
C4'	C3'	sing	1.55Å	1.51Å
C4'	H4'	sing	1.09Å	1.11Å
O4'	C1'	sing	1.43Å	1.43Å
C3'	O3'	sing	1.43Å	1.44Å
C3'	C2'	sing	1.55Å	1.53Å
C3'	H3'	sing	1.09Å	1.11Å
O3'	HO'3	sing	0.97Å	0.95Å
C2'	O2'	sing	1.43Å	1.43Å
C2'	C1'	sing	1.54Å	1.53Å
C2'	H2'	sing	1.09Å	1.12Å
O2'	HO'2	sing	0.97Å	0.95Å
C1'	H1'	sing	1.09Å	1.11Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N3	C3A	106.4°	109.7°
N3	C2	N1	115.4°	110.2°
N3	C2	H2	121.3°	125.0°
N3	C3A	C7A	107.0°	106.9°
N3	C3A	C4	131.8°	133.6°
C2	N1	C7A	102.1°	107.2°
C2	N1	C1'	129.8°	126.4°
N1	C2	H2	123.2°	124.9°
C7A	N1	C1'	128.1°	126.4°
N1	C7A	C3A	109.0°	106.0°
N1	C7A	C7	131.5°	134.1°
N1	C1'	O4'	112.5°	109.8°
N1	C1'	C2'	116.4°	109.8°
N1	C1'	H1'	100.4°	109.8°
C3A	C7A	C7	119.5°	119.9°
C7A	C3A	C4	121.2°	119.5°
C7A	C7	C6	120.3°	119.7°
C7A	C7	H7	120.8°	120.2°
C3A	C4	C5	119.8°	119.9°
C3A	C4	H4	120.4°	120.1°
C5	C4	H4	119.9°	120.0°
C4	C5	C6	119.7°	120.6°
C4	C5	C8	119.1°	119.7°
C6	C5	C8	121.1°	119.7°
C5	C6	C7	119.5°	120.5°
C5	C6	C9	121.4°	119.7°
C5	C8	H81	108.7°	109.5°
C5	C8	H82	119.1°	109.5°
C5	C8	H83	108.7°	109.5°
C7	C6	C9	119.1°	119.8°
C6	C7	H7	118.9°	120.2°
C6	C9	H91	107.9°	109.4°
C6	C9	H92	121.4°	109.5°
C6	C9	H93	107.9°	109.5°
H81	C8	H82	108.7°	109.4°
H81	C8	H83	101.3°	109.4°
H82	C8	H83	108.8°	109.5°
H91	C9	H92	107.9°	109.5°
H91	C9	H93	101.9°	109.5°
H92	C9	H93	108.0°	109.5°
O1P	P	O2P	109.6°	109.5°
O1P	P	O3P	110.0°	109.5°
O1P	P	O5'	109.3°	109.4°
O2P	P	O3P	108.9°	109.5°
O2P	P	O5'	108.6°	109.4°
P	O2P	HOP2	109.6°	106.8°
O3P	P	O5'	110.4°	109.5°
P	O3P	HOP3	110.0°	106.8°
P	O5'	C5'	119.9°	106.8°
O5'	C5'	C4'	113.1°	109.5°
O5'	C5'	H5'1	110.9°	109.5°
O5'	C5'	H5'2	110.9°	109.5°
C4'	C5'	H5'1	110.9°	109.5°
C4'	C5'	H5'2	110.8°	109.5°
C5'	C4'	O4'	113.7°	110.3°
C5'	C4'	C3'	116.3°	110.4°
C5'	C4'	H4'	99.4°	110.2°
H5'1	C5'	H5'2	99.5°	109.4°
O4'	C4'	C3'	102.1°	105.2°
O4'	C4'	H4'	114.3°	110.3°
C4'	O4'	C1'	112.5°	109.9°
C3'	C4'	H4'	111.6°	110.3°
C4'	C3'	O3'	112.4°	111.1°
C4'	C3'	C2'	100.5°	101.0°
C4'	C3'	H3'	115.1°	111.1°
O4'	C1'	C2'	102.5°	107.7°
O4'	C1'	H1'	114.8°	109.8°
O3'	C3'	C2'	114.2°	111.2°
O3'	C3'	H3'	101.8°	111.0°
C3'	O3'	HO'3	112.4°	106.8°
C2'	C3'	H3'	113.4°	111.1°
C3'	C2'	O2'	108.5°	110.9°
C3'	C2'	C1'	104.2°	102.2°
C3'	C2'	H2'	115.3°	110.8°
O2'	C2'	C1'	114.5°	111.0°
O2'	C2'	H2'	105.2°	110.8°
C2'	O2'	HO'2	108.5°	106.8°
C1'	C2'	H2'	109.4°	111.0°
C2'	C1'	H1'	110.8°	109.9°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N3	C2	N1	H2	180.0°	179.9°
N3	C2	N1	C7A	0.2°	0.0°
N3	C2	N1	C1'	179.6°	180.0°
C2	N3	C3A	C7A	0.4°	0.0°
C2	N3	C3A	C4	179.6°	180.0°
C3A	N3	C2	N1	0.1°	0.0°
N3	C3A	C7A	N1	0.5°	0.0°
C3A	N3	C2	H2	179.9°	180.0°
N3	C3A	C7A	C4	180.0°	179.9°
N3	C3A	C7A	C7	179.7°	180.0°
N3	C3A	C4	C5	179.9°	180.0°
N3	C3A	C4	H4	0.1°	0.0°
C2	N1	C7A	C1'	179.8°	179.9°
C2	N1	C7A	C3A	0.4°	0.0°
C2	N1	C7A	C7	179.9°	180.0°
C2	N1	C1'	O4'	168.4°	23.4°
C2	N1	C1'	C2'	50.5°	94.8°
C2	N1	C1'	H1'	69.1°	144.3°
C7A	N1	C2	H2	179.8°	180.0°
N1	C7A	C3A	C7	179.7°	180.0°
N1	C7A	C3A	C4	179.5°	179.9°
N1	C7A	C7	C6	179.6°	179.8°
N1	C7A	C7	H7	0.4°	0.1°
C7A	N1	C1'	O4'	11.8°	156.6°
C7A	N1	C1'	C2'	129.7°	85.2°
C7A	N1	C1'	H1'	110.7°	35.8°
C1'	N1	C2	H2	0.4°	0.1°
C1'	N1	C7A	C3A	179.4°	180.0°
C1'	N1	C7A	C7	0.3°	0.1°
N1	C1'	O4'	C4'	124.0°	117.9°
N1	C1'	O4'	C2'	125.8°	119.5°
N1	C1'	O4'	H1'	114.0°	120.8°
N1	C1'	C2'	C3'	96.3°	140.8°
N1	C1'	C2'	O2'	22.1°	22.6°
N1	C1'	C2'	H1'	113.8°	120.9°
N1	C1'	C2'	H2'	139.8°	101.0°
C7A	C3A	C4	C5	0.1°	0.0°
C7A	C3A	C4	H4	179.9°	180.0°
C3A	C7A	C7	C6	0.1°	0.2°
C3A	C7A	C7	H7	179.9°	180.0°
C7	C7A	C3A	C4	0.3°	0.0°
C7A	C7	C6	C5	0.3°	0.4°
C7A	C7	C6	H7	180.0°	179.8°
C7A	C7	C6	C9	180.0°	180.0°
C3A	C4	C5	H4	180.0°	180.0°
C3A	C4	C5	C6	0.3°	0.2°
C3A	C4	C5	C8	179.7°	180.0°
C4	C5	C6	C8	180.0°	179.8°
C4	C5	C6	C7	0.4°	0.4°
C4	C5	C6	C9	179.8°	180.0°
C4	C5	C8	H81	54.7°	90.0°
C4	C5	C8	H82	180.0°	150.1°
C4	C5	C8	H83	54.7°	30.0°
H4	C4	C5	C6	179.7°	179.8°
H4	C4	C5	C8	0.3°	0.0°
C5	C6	C7	C9	179.8°	179.6°
C5	C6	C7	H7	179.7°	179.8°
C6	C5	C8	H81	125.3°	90.2°
C6	C5	C8	H82	0.0°	29.7°
C6	C5	C8	H83	125.2°	149.8°
C5	C6	C9	H91	54.8°	90.4°
C5	C6	C9	H92	180.0°	29.6°
C5	C6	C9	H93	54.7°	149.6°
C8	C5	C6	C7	179.5°	179.8°
C8	C5	C6	C9	0.2°	0.2°
C5	C8	H81	H82	131.1°	120.0°
C5	C8	H81	H83	114.4°	120.0°
C5	C8	H82	H83	125.2°	120.1°
C7	C6	C9	H91	125.5°	90.0°
C7	C6	C9	H92	0.2°	150.0°
C7	C6	C9	H93	125.0°	30.0°
C9	C6	C7	H7	0.0°	0.2°
C6	C9	H91	H92	132.9°	120.0°
C6	C9	H91	H93	113.5°	120.0°
C6	C9	H92	H93	125.3°	120.0°
H81	C8	H82	H83	109.5°	119.9°
H91	C9	H92	H93	109.5°	120.1°
O1P	P	O2P	O3P	120.4°	120.0°
O1P	P	O2P	O5'	119.4°	119.9°
O1P	P	O3P	O5'	120.7°	120.0°
O1P	P	O2P	HOP2	180.0°	60.0°
O1P	P	O3P	HOP3	180.0°	180.0°
O1P	P	O5'	C5'	59.2°	55.0°
O2P	P	O3P	O5'	119.1°	120.0°
O2P	P	O3P	HOP3	59.8°	60.0°
O2P	P	O5'	C5'	178.7°	175.0°
O3P	P	O2P	HOP2	59.6°	60.0°
O3P	P	O5'	C5'	62.0°	65.0°
O5'	P	O2P	HOP2	60.6°	179.9°
O5'	P	O3P	HOP3	59.2°	60.0°
P	O5'	C5'	C4'	108.0°	180.0°
P	O5'	C5'	H5'1	17.2°	59.9°
P	O5'	C5'	H5'2	126.7°	60.0°
O5'	C5'	C4'	H5'1	125.3°	120.0°
O5'	C5'	C4'	H5'2	125.3°	120.0°
O5'	C5'	H5'1	H5'2	116.7°	120.0°
O5'	C5'	C4'	O4'	51.8°	66.4°
O5'	C5'	C4'	C3'	170.0°	177.8°
O5'	C5'	C4'	H4'	70.1°	55.6°
C4'	C5'	H5'1	H5'2	116.7°	120.0°
C5'	C4'	O4'	C3'	126.1°	119.1°
C5'	C4'	O4'	H4'	113.2°	122.0°
C5'	C4'	C3'	H4'	113.1°	122.1°
C5'	C4'	O4'	C1'	102.0°	143.5°
C5'	C4'	C3'	O3'	152.7°	86.6°
C5'	C4'	C3'	C2'	85.5°	155.4°
C5'	C4'	C3'	H3'	36.8°	37.5°
H5'1	C5'	C4'	O4'	177.0°	173.6°
H5'1	C5'	C4'	C3'	64.7°	57.7°
H5'1	C5'	C4'	H4'	55.2°	64.4°
H5'2	C5'	C4'	O4'	73.5°	53.6°
H5'2	C5'	C4'	C3'	44.7°	62.2°
H5'2	C5'	C4'	H4'	164.6°	175.6°
O4'	C4'	C3'	H4'	122.5°	118.9°
O4'	C4'	C3'	O3'	82.9°	154.4°
O4'	C4'	C3'	C2'	38.9°	36.4°
O4'	C4'	C3'	H3'	161.2°	81.5°
C4'	O4'	C1'	C2'	1.8°	1.7°
C4'	O4'	C1'	H1'	122.0°	121.3°
C3'	C4'	O4'	C1'	24.1°	24.4°
C4'	C3'	O3'	C2'	113.7°	111.6°
C4'	C3'	O3'	H3'	123.7°	124.2°
C4'	C3'	C2'	H3'	123.5°	117.9°
C4'	C3'	O3'	HO'3	180.0°	180.0°
C4'	C3'	C2'	O2'	163.7°	84.3°
C4'	C3'	C2'	C1'	41.3°	34.1°
C4'	C3'	C2'	H2'	78.7°	152.3°
H4'	C4'	O4'	C1'	144.8°	94.6°
H4'	C4'	C3'	O3'	39.6°	35.5°
H4'	C4'	C3'	C2'	161.4°	82.5°
H4'	C4'	C3'	H3'	76.3°	159.6°
O4'	C1'	C2'	C3'	26.9°	21.3°
O4'	C1'	C2'	O2'	145.3°	96.9°
O4'	C1'	C2'	H1'	123.0°	119.6°
O4'	C1'	C2'	H2'	96.9°	139.5°
O3'	C3'	C2'	H3'	116.0°	124.1°
O3'	C3'	C2'	O2'	43.1°	33.7°
O3'	C3'	C2'	C1'	79.3°	152.0°
O3'	C3'	C2'	H2'	160.8°	89.7°
C2'	C3'	O3'	HO'3	66.3°	68.4°
C3'	C2'	O2'	C1'	115.9°	112.8°
C3'	C2'	O2'	H2'	123.9°	123.4°
C3'	C2'	C1'	H2'	123.8°	118.2°
C3'	C2'	O2'	HO'2	180.0°	61.4°
C3'	C2'	C1'	H1'	149.9°	98.3°
H3'	C3'	O3'	HO'3	56.3°	55.8°
H3'	C3'	C2'	O2'	72.8°	157.8°
H3'	C3'	C2'	C1'	164.7°	83.9°
H3'	C3'	C2'	H2'	44.8°	34.4°
O2'	C2'	C1'	H2'	117.8°	123.6°
O2'	C2'	C1'	H1'	91.7°	143.5°
C1'	C2'	O2'	HO'2	64.1°	174.3°
H2'	C2'	O2'	HO'2	56.1°	62.0°
H2'	C2'	C1'	H1'	26.0°	19.9°

Definition date:	2002-03-19
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Replaces:	RIC
Derived from:	1L4E