Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

RB9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.46Å1.47Å
C1C5sing1.45Å1.44ÅAromatic
C1C8doub1.37Å1.37ÅAromatic
N1C2sing1.35Å1.37Å
N1C3sing1.46Å1.47Å
O1C2doub1.22Å1.23Å
S1C7sing1.75Å1.72ÅAromatic
S1C8sing1.70Å1.71ÅAromatic
N2C8sing1.39Å1.40Å
N2C9sing1.35Å1.38Å
O2C9doub1.21Å1.25Å
C3C4sing1.51Å1.52Å
N3C10sing1.47Å1.48Å
N3C11sing1.47Å1.48Å
C4C19doub1.38Å1.40ÅAromatic
C4C23sing1.38Å1.41ÅAromatic
N4C24sing1.37Å1.37ÅAromatic
N4C25sing1.38Å1.38ÅAromatic
C5C6sing1.48Å1.46ÅAromatic
C5C7doub1.34Å1.39ÅAromatic
C6C14doub1.39Å1.41ÅAromatic
C6C18sing1.39Å1.42ÅAromatic
C9C10sing1.51Å1.52Å
C11C12sing1.53Å1.51Å
C12C13sing1.51Å1.50Å
C13C24doub1.34Å1.38ÅAromatic
C13C26sing1.47Å1.42ÅAromatic
C14C15sing1.38Å1.42ÅAromatic
C15C16doub1.38Å1.40ÅAromatic
C16C17sing1.38Å1.39ÅAromatic
C17C18doub1.38Å1.39ÅAromatic
C19C20sing1.38Å1.39ÅAromatic
C20C21doub1.38Å1.38ÅAromatic
C21C22sing1.38Å1.40ÅAromatic
C22C23doub1.38Å1.38ÅAromatic
C25C26doub1.41Å1.41ÅAromatic
C25C30sing1.39Å1.41ÅAromatic
C26C27sing1.40Å1.41ÅAromatic
C27C28doub1.37Å1.39ÅAromatic
C28C29sing1.39Å1.40ÅAromatic
C29C30doub1.38Å1.40ÅAromatic
N1HN1sing0.97Å1.00Å
N2HN2sing0.97Å1.00Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
N3HN3sing1.01Å1.00Å
N4HN4sing0.97Å1.00Å
C7H7sing1.08Å1.08Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C14H14sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
C17H17sing1.08Å1.08Å
C18H18sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C24H24sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C29H29sing1.08Å1.08Å
C30H30sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C5123.0°123.6°
C2C1C8123.7°123.6°
C1C2N1114.5°120.0°
C1C2O1119.5°120.0°
C5C1C8113.1°112.8°
C1C5C6127.6°123.6°
C1C5C7110.4°112.8°
C1C8S1112.1°111.0°
C1C8N2126.4°124.5°
C2N1C3118.3°120.0°
N1C2O1126.1°120.0°
C2N1HN1120.8°120.0°
N1C3C4108.4°109.5°
C3N1HN1120.9°120.0°
N1C3H3109.8°109.5°
N1C3H3A109.8°109.5°
C7S1C891.9°92.7°
S1C7C5112.5°110.7°
S1C7H7123.8°124.6°
S1C8N2121.5°124.5°
C8N2C9122.3°120.0°
C8N2HN2118.9°120.0°
N2C9O2122.4°120.0°
N2C9C10115.3°120.0°
C9N2HN2118.9°120.0°
O2C9C10120.3°120.0°
C3C4C19120.9°120.0°
C3C4C23120.3°120.0°
C4C3H3109.9°109.5°
C4C3H3A109.8°109.4°
C10N3C11109.9°111.0°
N3C10C9105.8°109.5°
C10N3HN3109.3°111.0°
N3C10H10110.7°109.5°
N3C10H10A110.7°109.5°
N3C11C12114.5°109.5°
C11N3HN3109.4°111.0°
N3C11H11107.9°109.4°
N3C11H11A107.8°109.5°
C19C4C23118.8°120.0°
C4C19C20122.2°120.0°
C4C19H19118.9°120.0°
C4C23C22118.7°120.0°
C4C23H23120.6°120.0°
C24N4C25108.8°109.8°
N4C24C13109.0°110.0°
C24N4HN4125.6°125.1°
N4C24H24125.5°125.0°
N4C25C26107.9°107.2°
N4C25C30129.2°133.5°
C25N4HN4125.6°125.1°
C6C5C7121.9°123.6°
C5C6C14123.7°120.1°
C5C6C18120.4°120.1°
C5C7H7123.8°124.7°
C14C6C18115.8°119.8°
C6C14C15124.8°119.9°
C6C14H14117.6°120.0°
C6C18C17120.7°119.9°
C6C18H18119.6°120.0°
C9C10H10110.7°109.5°
C9C10H10A110.7°109.4°
C11C12C13114.7°109.5°
C12C11H11107.8°109.5°
C12C11H11A107.8°109.5°
C11C12H12107.8°109.5°
C11C12H12A107.8°109.5°
C12C13C24127.5°126.5°
C12C13C26125.3°126.5°
C13C12H12107.8°109.5°
C13C12H12A107.8°109.5°
C24C13C26107.0°107.0°
C13C24H24125.5°125.0°
C13C26C25106.9°106.0°
C13C26C27134.8°134.0°
C14C15C16116.3°120.2°
C15C14H14117.6°120.1°
C14C15H15121.8°120.0°
C15C16C17121.1°120.2°
C16C15H15121.8°119.9°
C15C16H16119.5°119.9°
C16C17C18121.2°120.2°
C17C16H16119.4°119.9°
C16C17H17119.4°119.9°
C18C17H17119.4°120.0°
C17C18H18119.7°120.1°
C19C20C21118.2°120.0°
C20C19H19118.9°120.0°
C19C20H20120.9°120.0°
C20C21C22120.0°120.0°
C21C20H20120.9°120.0°
C20C21H21120.0°120.0°
C21C22C23122.0°120.0°
C22C21H21120.0°120.0°
C21C22H22119.0°120.0°
C23C22H22119.0°120.0°
C22C23H23120.6°120.0°
C26C25C30122.4°119.3°
C25C26C27118.0°120.0°
C25C30C29118.3°119.8°
C25C30H30120.8°120.1°
C26C27C28119.4°119.8°
C26C27H27120.3°120.1°
C27C28C29122.3°120.5°
C28C27H27120.3°120.1°
C27C28H28118.8°119.7°
C28C29C30119.1°120.7°
C29C28H28118.8°119.8°
C28C29H29120.4°119.6°
C30C29H29120.5°119.7°
C29C30H30120.8°120.1°
H3C3H3A109.1°109.5°
H10C10H10A108.2°109.5°
H11C11H11A111.0°109.5°
H12C12H12A111.1°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C5C8175.1°179.8°
C1C2N1O1179.6°180.0°
C1C2N1C3173.4°180.0°
C2C1C8S1175.1°179.8°
C2C1C8N23.0°0.0°
C2C1C5C67.4°0.1°
C2C1C5C7176.7°180.0°
C1C2N1HN16.6°0.0°
C5C1C2N1128.1°90.0°
C5C1C2O152.3°90.0°
C1C5C7S12.4°0.0°
C5C1C8S10.0°0.4°
C5C1C8N2178.1°179.8°
C1C5C6C7175.5°179.9°
C1C5C6C1442.9°130.0°
C1C5C6C18141.9°50.3°
C1C5C7H7177.6°179.8°
C8C1C2N157.3°89.7°
C8C1C2O1122.3°90.3°
C1C8S1C71.1°0.4°
C1C8S1N2178.3°179.9°
C1C8N2C962.4°180.0°
C8C1C5C6177.4°179.7°
C8C1C5C71.5°0.2°
C1C8N2HN2117.6°0.0°
C2N1C3HN1180.0°180.0°
C2N1C3C474.2°180.0°
C2N1C3H3165.8°60.0°
C2N1C3H3A45.8°60.0°
C3N1C2O17.0°0.0°
N1C3C4H3120.0°120.0°
N1C3C4H3A120.0°120.0°
N1C3C4C1958.6°90.0°
N1C3C4C23120.4°90.2°
N1C3H3H3A120.4°120.0°
O1C2N1HN1173.0°180.0°
C7S1C8N2179.4°179.8°
S1C7C5C6178.5°180.0°
S1C7C5H7180.0°179.8°
S1C8N2C9115.6°0.2°
C8S1C7C52.0°0.2°
S1C8N2HN264.4°179.9°
C8S1C7H7178.0°180.0°
C8N2C9HN2180.0°179.9°
C8N2C9O24.9°0.0°
C8N2C9C10168.7°180.0°
N2C9O2C10163.0°179.9°
N2C9C10N3168.1°180.0°
N2C9C10H1072.0°59.9°
N2C9C10H10A48.0°60.1°
O2C9C10N33.9°0.0°
O2C9N2HN2175.2°180.0°
O2C9C10H10123.8°120.0°
O2C9C10H10A116.2°120.0°
C3C4C19C23179.0°179.8°
C3C4C19C20177.0°180.0°
C3C4C23C22179.2°179.8°
C4C3N1HN1105.8°0.0°
C4C3H3H3A120.4°119.9°
C3C4C19H193.0°0.0°
C3C4C23H230.9°0.1°
C10N3C11HN3120.0°123.9°
N3C10C9H10120.0°120.0°
N3C10C9H10A120.0°120.0°
C10N3C11C12178.1°180.0°
N3C10H10H10A121.5°120.0°
C10N3C11H1158.1°60.0°
C10N3C11H11A61.9°60.0°
C11N3C10C991.5°180.0°
N3C11C12H11120.0°119.9°
N3C11C12H11A120.0°120.0°
N3C11C12C13172.0°180.0°
C11N3C10H10148.5°60.0°
C11N3C10H10A28.5°60.1°
N3C11H11H11A118.0°120.0°
N3C11C12H1267.9°60.0°
N3C11C12H12A52.1°60.0°
C4C19C20H19180.0°180.0°
C4C19C20C212.5°0.0°
C19C4C23C221.8°0.4°
C19C4C3H361.4°30.0°
C19C4C3H3A178.6°150.0°
C4C19C20H20177.5°180.0°
C19C4C23H23178.2°179.7°
C23C4C19C204.0°0.3°
C4C23C22C211.6°0.4°
C4C23C22H23180.0°179.9°
C23C4C3H3119.6°149.7°
C23C4C3H3A0.4°29.8°
C23C4C19H19176.1°179.8°
C4C23C22H22178.4°179.8°
C24N4C25HN4180.0°179.7°
N4C24C13C12170.2°179.9°
N4C24C13H24180.0°180.0°
N4C24C13C265.7°0.0°
C24N4C25C260.8°0.0°
C24N4C25C30172.9°179.9°
C25N4C24C133.1°0.0°
N4C25C26C134.2°0.0°
N4C25C26C30172.8°179.9°
N4C25C26C27178.7°180.0°
N4C25C30C29177.7°180.0°
C25N4C24H24176.9°180.0°
N4C25C30H302.3°0.0°
C5C6C14C18175.5°179.7°
C5C6C14C15179.8°179.9°
C5C6C18C17179.2°179.8°
C6C5C7H71.5°0.3°
C5C6C14H140.2°0.1°
C5C6C18H180.7°0.1°
C7C5C6C14132.6°49.9°
C7C5C6C1842.7°129.8°
C6C14C15H14180.0°180.0°
C6C14C15C162.8°0.0°
C14C6C18C173.6°0.6°
C6C14C15H15177.2°180.0°
C14C6C18H18176.4°179.8°
C18C6C14C154.7°0.3°
C6C18C17C160.8°0.6°
C6C18C17H18180.0°179.7°
C18C6C14H14175.3°179.7°
C6C18C17H17179.2°179.7°
C10C9N2HN211.3°0.1°
C9C10N3HN3148.5°56.1°
C9C10H10H10A121.5°120.0°
C11C12C13H12120.0°120.0°
C11C12C13H12A120.0°120.0°
C11C12C13C2480.9°95.0°
C11C12C13C26103.9°85.0°
C12C11N3HN361.9°56.1°
C12C11H11H11A117.9°120.1°
C11C12H12H12A117.9°120.0°
C12C13C24C26175.9°180.0°
C12C13C26C25169.9°180.0°
C12C13C26C273.2°0.0°
C13C12C11H1152.0°60.0°
C13C12C11H11A68.0°60.0°
C13C12H12H12A117.9°120.0°
C12C13C24H249.8°0.0°
C24C13C26C256.1°0.0°
C24C13C26C27179.2°180.0°
C13C24N4HN4176.9°179.7°
C24C13C12H12159.1°145.0°
C24C13C12H12A39.1°25.0°
C13C26C25C27174.5°180.0°
C13C26C25C30177.0°179.9°
C13C26C27C28178.6°180.0°
C26C13C12H1216.1°35.0°
C26C13C12H12A136.1°155.0°
C26C13C24H24174.3°180.0°
C13C26C27H271.5°0.0°
C14C15C16H15180.0°179.9°
C14C15C16C170.3°0.0°
C14C15C16H16179.7°180.0°
C15C16C17H16180.0°180.0°
C15C16C17C181.3°0.3°
C16C15C14H14177.2°180.0°
C15C16C17H17178.7°180.0°
C16C17C18H17180.0°179.8°
C17C16C15H15179.7°180.0°
C16C17C18H18179.1°179.7°
C18C17C16H16178.8°179.7°
C19C20C21H20180.0°180.0°
C19C20C21C221.0°0.0°
C19C20C21H21179.0°179.9°
C20C21C22H21180.0°180.0°
C20C21C22C233.1°0.2°
C21C20C19H19177.5°180.0°
C20C21C22H22176.9°180.0°
C21C22C23H22180.0°179.9°
C22C21C20H20179.0°180.0°
C21C22C23H23178.4°179.7°
C23C22C21H21176.9°179.9°
C25C26C27C286.0°0.0°
C26C25C30C296.6°0.1°
C26C25N4HN4179.2°179.7°
C25C26C27H27174.0°180.0°
C26C25C30H30173.4°180.0°
C30C25C26C278.5°0.1°
C25C30C29C282.2°0.1°
C25C30C29H30180.0°179.9°
C30C25N4HN47.1°0.2°
C25C30C29H29177.9°179.9°
C26C27C28H27180.0°180.0°
C26C27C28C291.9°0.0°
C26C27C28H28178.1°180.0°
C27C28C29H28180.0°179.9°
C27C28C29C300.0°0.1°
C27C28C29H29179.9°180.0°
C28C29C30H29180.0°180.0°
C29C28C27H27178.1°180.0°
C28C29C30H30177.8°180.0°
C30C29C28H28180.0°180.0°
HN1N1C3H314.2°120.0°
HN1N1C3H3A134.2°120.0°
HN3N3C10H1028.5°63.9°
HN3N3C10H10A91.5°176.1°
HN3N3C11H11178.0°176.0°
HN3N3C11H11A58.0°64.0°
HN4N4C24H243.1°0.3°
H11C11C12H12172.0°179.9°
H11C11C12H12A68.0°59.9°
H11AC11C12H1252.1°60.0°
H11AC11C12H12A172.1°180.0°
H14C14C15H152.8°0.0°
H15C15C16H160.3°0.1°
H16C16C17H171.2°0.1°
H17C17C18H180.9°0.0°
H19C19C20H202.5°0.0°
H20C20C21H211.0°0.1°
H21C21C22H223.1°0.0°
H22C22C23H231.6°0.1°
H27C27C28H281.9°0.0°
H28C28C29H290.1°0.0°
H29C29C30H302.2°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon