R5V
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CAD | CAB | sing | 1.53Å | 1.53Å | |
| OAL | NAK | sing | 1.42Å | 1.43Å | |
| CAA | CAB | sing | 1.53Å | 1.53Å | |
| CAB | CAC | sing | 1.53Å | 1.52Å | |
| CAB | CAE | sing | 1.51Å | 1.53Å | |
| NAK | C | sing | 1.35Å | 1.34Å | |
| O | C | doub | 1.21Å | 1.23Å | |
| CAE | N | sing | 1.35Å | 1.34Å | |
| CAE | OAF | doub | 1.21Å | 1.23Å | |
| C | CA | sing | 1.51Å | 1.53Å | |
| N | CA | sing | 1.47Å | 1.47Å | |
| CA | CAM | sing | 1.51Å | 1.40Å | |
| CAM | CAN | doub | 1.38Å | 1.39Å | Aromatic |
| CAM | CAW | sing | 1.38Å | 1.39Å | Aromatic |
| CAN | CAO | sing | 1.38Å | 1.40Å | Aromatic |
| CAW | CAV | doub | 1.38Å | 1.39Å | Aromatic |
| CAO | CAP | doub | 1.39Å | 1.39Å | Aromatic |
| CAV | CAP | sing | 1.39Å | 1.39Å | Aromatic |
| CAP | NAQ | sing | 1.40Å | 1.33Å | |
| NAQ | NAU | sing | 1.40Å | 1.21Å | Aromatic |
| NAQ | CAR | sing | 1.35Å | 1.33Å | Aromatic |
| NAU | CAT | doub | 1.31Å | 1.33Å | Aromatic |
| CAR | CAS | doub | 1.35Å | 1.33Å | Aromatic |
| CAT | CAS | sing | 1.40Å | 1.33Å | Aromatic |
| CAA | H1 | sing | 1.09Å | 1.10Å | |
| CAA | H2 | sing | 1.09Å | 1.10Å | |
| CAA | H3 | sing | 1.09Å | 1.10Å | |
| CAC | H4 | sing | 1.09Å | 1.10Å | |
| CAC | H5 | sing | 1.09Å | 1.10Å | |
| CAC | H6 | sing | 1.09Å | 1.10Å | |
| CAD | H7 | sing | 1.09Å | 1.10Å | |
| CAD | H8 | sing | 1.09Å | 1.10Å | |
| CAD | H9 | sing | 1.09Å | 1.10Å | |
| N | H10 | sing | 0.97Å | 1.00Å | |
| CA | H11 | sing | 1.09Å | 1.10Å | |
| NAK | H12 | sing | 0.97Å | 1.00Å | |
| OAL | H13 | sing | 0.97Å | 0.95Å | |
| CAW | H14 | sing | 1.08Å | 1.08Å | |
| CAV | H15 | sing | 1.08Å | 1.08Å | |
| CAN | H16 | sing | 1.08Å | 1.08Å | |
| CAO | H17 | sing | 1.08Å | 1.08Å | |
| CAT | H18 | sing | 1.08Å | 1.08Å | |
| CAS | H19 | sing | 1.08Å | 1.08Å | |
| CAR | H20 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CAD | CAB | CAA | 109.1° | 109.5° |
| CAD | CAB | CAC | 109.5° | 109.5° |
| CAD | CAB | CAE | 108.6° | 109.4° |
| CAB | CAD | H7 | 109.5° | 109.5° |
| CAB | CAD | H8 | 109.5° | 109.5° |
| CAB | CAD | H9 | 109.5° | 109.4° |
| OAL | NAK | C | 117.8° | 120.0° |
| OAL | NAK | H12 | 121.1° | 120.1° |
| NAK | OAL | H13 | 109.5° | 113.9° |
| CAA | CAB | CAC | 109.6° | 109.5° |
| CAA | CAB | CAE | 109.4° | 109.4° |
| CAB | CAA | H1 | 109.5° | 109.5° |
| CAB | CAA | H2 | 109.4° | 109.5° |
| CAB | CAA | H3 | 109.5° | 109.4° |
| CAC | CAB | CAE | 110.6° | 109.5° |
| CAB | CAC | H4 | 109.5° | 109.5° |
| CAB | CAC | H5 | 109.5° | 109.5° |
| CAB | CAC | H6 | 109.5° | 109.5° |
| CAB | CAE | N | 115.9° | 120.0° |
| CAB | CAE | OAF | 120.9° | 120.0° |
| NAK | C | O | 124.7° | 120.0° |
| NAK | C | CA | 113.7° | 120.0° |
| C | NAK | H12 | 121.1° | 119.9° |
| O | C | CA | 121.6° | 120.0° |
| N | CAE | OAF | 123.2° | 120.0° |
| CAE | N | CA | 119.4° | 120.0° |
| CAE | N | H10 | 120.3° | 120.0° |
| C | CA | N | 108.6° | 109.5° |
| C | CA | CAM | 113.1° | 109.5° |
| C | CA | H11 | 105.2° | 109.4° |
| N | CA | CAM | 116.6° | 109.5° |
| CA | N | H10 | 120.3° | 119.9° |
| N | CA | H11 | 105.9° | 109.4° |
| CA | CAM | CAN | 123.3° | 120.0° |
| CA | CAM | CAW | 117.4° | 119.9° |
| CAM | CA | H11 | 106.6° | 109.5° |
| CAN | CAM | CAW | 119.3° | 120.1° |
| CAM | CAN | CAO | 119.5° | 120.1° |
| CAM | CAN | H16 | 120.2° | 119.9° |
| CAM | CAW | CAV | 121.3° | 120.1° |
| CAM | CAW | H14 | 119.3° | 120.0° |
| CAN | CAO | CAP | 120.6° | 119.9° |
| CAO | CAN | H16 | 120.2° | 120.0° |
| CAN | CAO | H17 | 119.7° | 120.0° |
| CAW | CAV | CAP | 119.6° | 119.9° |
| CAV | CAW | H14 | 119.3° | 119.9° |
| CAW | CAV | H15 | 120.2° | 120.0° |
| CAO | CAP | CAV | 119.6° | 119.9° |
| CAO | CAP | NAQ | 121.7° | 120.1° |
| CAP | CAO | H17 | 119.7° | 120.0° |
| CAV | CAP | NAQ | 118.7° | 120.1° |
| CAP | CAV | H15 | 120.2° | 120.0° |
| CAP | NAQ | NAU | 125.0° | 126.0° |
| CAP | NAQ | CAR | 125.6° | 126.0° |
| NAU | NAQ | CAR | 109.4° | 107.9° |
| NAQ | NAU | CAT | 110.2° | 108.2° |
| NAQ | CAR | CAS | 107.5° | 107.7° |
| NAQ | CAR | H20 | 126.2° | 126.2° |
| NAU | CAT | CAS | 107.2° | 108.3° |
| NAU | CAT | H18 | 126.4° | 125.9° |
| CAR | CAS | CAT | 105.7° | 107.9° |
| CAR | CAS | H19 | 127.1° | 126.0° |
| CAS | CAR | H20 | 126.3° | 126.1° |
| CAS | CAT | H18 | 126.4° | 125.9° |
| CAT | CAS | H19 | 127.1° | 126.0° |
| H1 | CAA | H2 | 109.5° | 109.6° |
| H1 | CAA | H3 | 109.5° | 109.5° |
| H2 | CAA | H3 | 109.5° | 109.4° |
| H4 | CAC | H5 | 109.5° | 109.4° |
| H4 | CAC | H6 | 109.5° | 109.4° |
| H5 | CAC | H6 | 109.5° | 109.5° |
| H7 | CAD | H8 | 109.4° | 109.5° |
| H7 | CAD | H9 | 109.4° | 109.5° |
| H8 | CAD | H9 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CAD | CAB | CAA | CAC | 119.9° | 120.1° |
| CAD | CAB | CAA | CAE | 118.6° | 119.9° |
| CAD | CAB | CAC | CAE | 119.7° | 120.0° |
| CAD | CAB | CAE | N | 60.7° | 60.1° |
| CAD | CAB | CAE | OAF | 118.6° | 120.0° |
| CAD | CAB | CAA | H1 | 180.0° | 180.0° |
| CAD | CAB | CAA | H2 | 60.0° | 59.9° |
| CAD | CAB | CAA | H3 | 60.0° | 60.0° |
| CAD | CAB | CAC | H4 | 180.0° | 60.0° |
| CAD | CAB | CAC | H5 | 60.0° | 60.0° |
| CAD | CAB | CAC | H6 | 60.0° | 180.0° |
| CAB | CAD | H7 | H8 | 120.0° | 120.0° |
| CAB | CAD | H7 | H9 | 120.0° | 120.0° |
| CAB | CAD | H8 | H9 | 120.0° | 120.0° |
| OAL | NAK | C | H12 | 180.0° | 180.0° |
| OAL | NAK | C | O | 2.0° | 0.0° |
| OAL | NAK | C | CA | 179.4° | 180.0° |
| CAA | CAB | CAC | CAE | 120.7° | 120.0° |
| CAA | CAB | CAE | N | 179.7° | 180.0° |
| CAA | CAB | CAE | OAF | 0.3° | 0.0° |
| CAB | CAA | H1 | H2 | 120.0° | 120.1° |
| CAB | CAA | H1 | H3 | 120.0° | 119.9° |
| CAB | CAA | H2 | H3 | 120.0° | 119.9° |
| CAA | CAB | CAC | H4 | 60.4° | 60.0° |
| CAA | CAB | CAC | H5 | 179.6° | 180.0° |
| CAA | CAB | CAC | H6 | 59.6° | 59.9° |
| CAA | CAB | CAD | H7 | 180.0° | 60.0° |
| CAA | CAB | CAD | H8 | 60.0° | 180.0° |
| CAA | CAB | CAD | H9 | 60.0° | 60.0° |
| CAC | CAB | CAE | N | 59.5° | 60.0° |
| CAC | CAB | CAE | OAF | 121.1° | 120.0° |
| CAC | CAB | CAA | H1 | 60.0° | 59.9° |
| CAC | CAB | CAA | H2 | 59.9° | 180.0° |
| CAC | CAB | CAA | H3 | 179.9° | 60.0° |
| CAB | CAC | H4 | H5 | 120.0° | 120.0° |
| CAB | CAC | H4 | H6 | 120.0° | 120.0° |
| CAB | CAC | H5 | H6 | 120.0° | 120.1° |
| CAC | CAB | CAD | H7 | 60.0° | 180.0° |
| CAC | CAB | CAD | H8 | 180.0° | 59.9° |
| CAC | CAB | CAD | H9 | 60.0° | 60.0° |
| CAB | CAE | N | OAF | 179.3° | 179.9° |
| CAB | CAE | N | CA | 175.5° | 180.0° |
| CAE | CAB | CAA | H1 | 61.4° | 60.1° |
| CAE | CAB | CAA | H2 | 178.6° | 60.0° |
| CAE | CAB | CAA | H3 | 58.7° | 180.0° |
| CAE | CAB | CAC | H4 | 60.3° | 180.0° |
| CAE | CAB | CAC | H5 | 59.7° | 60.0° |
| CAE | CAB | CAC | H6 | 179.7° | 60.1° |
| CAE | CAB | CAD | H7 | 60.9° | 60.0° |
| CAE | CAB | CAD | H8 | 59.1° | 60.1° |
| CAE | CAB | CAD | H9 | 179.1° | 180.0° |
| CAB | CAE | N | H10 | 4.5° | 0.1° |
| NAK | C | O | CA | 177.2° | 180.0° |
| NAK | C | CA | N | 109.0° | 180.0° |
| NAK | C | CA | CAM | 120.0° | 60.0° |
| NAK | C | CA | H11 | 4.0° | 60.1° |
| C | NAK | OAL | H13 | 0.9° | 180.0° |
| O | C | CA | N | 68.5° | 0.0° |
| O | C | CA | CAM | 62.5° | 120.0° |
| O | C | CA | H11 | 178.5° | 119.9° |
| O | C | NAK | H12 | 178.1° | 180.0° |
| CAE | N | CA | C | 129.6° | 85.0° |
| CAE | N | CA | H10 | 180.0° | 180.0° |
| CAE | N | CA | CAM | 101.3° | 155.0° |
| CAE | N | CA | H11 | 17.0° | 34.9° |
| OAF | CAE | N | CA | 3.8° | 0.0° |
| OAF | CAE | N | H10 | 176.2° | 180.0° |
| C | CA | N | CAM | 129.1° | 120.0° |
| C | CA | N | H11 | 112.6° | 119.9° |
| C | CA | CAM | H11 | 115.2° | 120.0° |
| C | CA | CAM | CAN | 137.4° | 100.0° |
| C | CA | CAM | CAW | 45.3° | 80.3° |
| C | CA | N | H10 | 50.4° | 95.0° |
| CA | C | NAK | H12 | 0.7° | 0.0° |
| N | CA | CAM | H11 | 118.0° | 120.0° |
| N | CA | CAM | CAN | 10.5° | 140.0° |
| N | CA | CAM | CAW | 172.2° | 39.7° |
| CA | CAM | CAN | CAW | 177.3° | 179.8° |
| CA | CAM | CAN | CAO | 178.6° | 180.0° |
| CA | CAM | CAW | CAV | 178.7° | 180.0° |
| CAM | CA | N | H10 | 78.7° | 25.0° |
| CA | CAM | CAW | H14 | 1.3° | 0.0° |
| CA | CAM | CAN | H16 | 1.4° | 0.0° |
| CAM | CAN | CAO | H16 | 180.0° | 180.0° |
| CAN | CAM | CAW | CAV | 1.3° | 0.2° |
| CAM | CAN | CAO | CAP | 0.7° | 0.1° |
| CAN | CAM | CA | H11 | 107.5° | 20.0° |
| CAN | CAM | CAW | H14 | 178.7° | 179.8° |
| CAM | CAN | CAO | H17 | 179.3° | 180.0° |
| CAW | CAM | CAN | CAO | 1.4° | 0.2° |
| CAM | CAW | CAV | H14 | 180.0° | 180.0° |
| CAM | CAW | CAV | CAP | 0.6° | 0.0° |
| CAW | CAM | CA | H11 | 69.8° | 159.7° |
| CAM | CAW | CAV | H15 | 179.4° | 180.0° |
| CAW | CAM | CAN | H16 | 178.6° | 179.8° |
| CAN | CAO | CAP | H17 | 180.0° | 179.9° |
| CAN | CAO | CAP | CAV | 0.1° | 0.3° |
| CAN | CAO | CAP | NAQ | 179.1° | 180.0° |
| CAW | CAV | CAP | CAO | 0.1° | 0.3° |
| CAW | CAV | CAP | H15 | 180.0° | 180.0° |
| CAW | CAV | CAP | NAQ | 179.2° | 180.0° |
| CAO | CAP | CAV | NAQ | 179.1° | 179.7° |
| CAO | CAP | NAQ | NAU | 173.0° | 179.7° |
| CAO | CAP | NAQ | CAR | 9.2° | 0.0° |
| CAO | CAP | CAV | H15 | 179.9° | 179.7° |
| CAP | CAO | CAN | H16 | 179.3° | 179.9° |
| CAV | CAP | NAQ | NAU | 7.9° | 0.0° |
| CAV | CAP | NAQ | CAR | 169.8° | 179.7° |
| CAP | CAV | CAW | H14 | 179.4° | 180.0° |
| CAV | CAP | CAO | H17 | 179.9° | 179.7° |
| CAP | NAQ | NAU | CAR | 178.1° | 179.8° |
| CAP | NAQ | NAU | CAT | 179.1° | 180.0° |
| CAP | NAQ | CAR | CAS | 179.1° | 179.9° |
| NAQ | CAP | CAV | H15 | 0.8° | 0.0° |
| NAQ | CAP | CAO | H17 | 0.9° | 0.0° |
| CAP | NAQ | CAR | H20 | 0.9° | 0.0° |
| NAU | NAQ | CAR | CAS | 1.0° | 0.3° |
| NAQ | NAU | CAT | CAS | 0.6° | 0.0° |
| NAQ | NAU | CAT | H18 | 179.4° | 180.0° |
| NAU | NAQ | CAR | H20 | 179.0° | 179.8° |
| CAR | NAQ | NAU | CAT | 1.0° | 0.2° |
| NAQ | CAR | CAS | H20 | 180.0° | 179.9° |
| NAQ | CAR | CAS | CAT | 0.6° | 0.3° |
| NAQ | CAR | CAS | H19 | 179.3° | 179.9° |
| NAU | CAT | CAS | CAR | 0.1° | 0.2° |
| NAU | CAT | CAS | H18 | 180.0° | 179.9° |
| NAU | CAT | CAS | H19 | 179.9° | 180.0° |
| CAR | CAS | CAT | H19 | 180.0° | 179.8° |
| CAR | CAS | CAT | H18 | 180.0° | 179.8° |
| CAT | CAS | CAR | H20 | 179.4° | 179.8° |
| H1 | CAA | H2 | H3 | 120.0° | 120.0° |
| H4 | CAC | H5 | H6 | 120.0° | 120.0° |
| H7 | CAD | H8 | H9 | 119.9° | 120.0° |
| H10 | N | CA | H11 | 163.0° | 145.0° |
| H12 | NAK | OAL | H13 | 179.2° | 0.0° |
| H14 | CAW | CAV | H15 | 0.6° | 0.0° |
| H16 | CAN | CAO | H17 | 0.7° | 0.0° |
| H18 | CAT | CAS | H19 | 0.1° | 0.1° |
| H19 | CAS | CAR | H20 | 0.7° | 0.0° |
