R3A
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C10 | O11 | sing | 1.43Å | 1.43Å | |
C10 | C9 | sing | 1.53Å | 1.51Å | |
C8 | C6 | sing | 1.53Å | 1.53Å | |
C7 | C6 | sing | 1.53Å | 1.53Å | |
O11 | C12 | sing | 1.43Å | 1.43Å | |
C6 | C4 | sing | 1.53Å | 1.55Å | |
C12 | C13 | sing | 1.53Å | 1.50Å | |
C9 | N1 | sing | 1.47Å | 1.48Å | |
N1 | C13 | sing | 1.47Å | 1.47Å | |
N1 | C2 | sing | 1.35Å | 1.35Å | |
C4 | C2 | sing | 1.51Å | 1.54Å | |
C4 | N5 | sing | 1.47Å | 1.46Å | |
C2 | O3 | doub | 1.21Å | 1.23Å | |
N5 | S24 | sing | 1.66Å | 1.62Å | |
O25 | S24 | doub | 1.42Å | 1.43Å | |
S24 | O26 | doub | 1.42Å | 1.43Å | |
S24 | C15 | sing | 1.76Å | 1.76Å | |
C14 | C15 | doub | 1.39Å | 1.39Å | Aromatic |
C14 | C19 | sing | 1.36Å | 1.37Å | Aromatic |
C15 | C16 | sing | 1.36Å | 1.37Å | Aromatic |
C19 | C18 | doub | 1.40Å | 1.42Å | Aromatic |
CL27 | C23 | sing | 1.74Å | 1.74Å | |
C16 | C17 | doub | 1.40Å | 1.42Å | Aromatic |
C18 | C17 | sing | 1.42Å | 1.43Å | Aromatic |
C18 | C23 | sing | 1.41Å | 1.43Å | Aromatic |
C17 | C20 | sing | 1.41Å | 1.44Å | Aromatic |
C23 | C22 | doub | 1.36Å | 1.38Å | Aromatic |
C22 | N21 | sing | 1.33Å | 1.34Å | Aromatic |
C20 | N21 | doub | 1.32Å | 1.33Å | Aromatic |
C20 | N28 | sing | 1.39Å | 1.42Å | |
N28 | C29 | sing | 1.38Å | 1.34Å | |
C29 | N31 | doub | 1.30Å | 1.32Å | |
C29 | N30 | sing | 1.37Å | 1.32Å | |
C7 | H1 | sing | 1.09Å | 1.10Å | |
C7 | H2 | sing | 1.09Å | 1.10Å | |
C7 | H3 | sing | 1.09Å | 1.10Å | |
C8 | H4 | sing | 1.09Å | 1.10Å | |
C8 | H5 | sing | 1.09Å | 1.10Å | |
C8 | H6 | sing | 1.09Å | 1.10Å | |
C9 | H7 | sing | 1.09Å | 1.10Å | |
C9 | H8 | sing | 1.09Å | 1.10Å | |
C10 | H9 | sing | 1.09Å | 1.10Å | |
C10 | H10 | sing | 1.09Å | 1.10Å | |
C12 | H11 | sing | 1.09Å | 1.10Å | |
C12 | H12 | sing | 1.09Å | 1.10Å | |
C13 | H13 | sing | 1.09Å | 1.10Å | |
C13 | H14 | sing | 1.09Å | 1.10Å | |
C14 | H15 | sing | 1.08Å | 1.08Å | |
C16 | H16 | sing | 1.08Å | 1.08Å | |
C19 | H17 | sing | 1.08Å | 1.08Å | |
C22 | H18 | sing | 1.08Å | 1.08Å | |
N28 | H19 | sing | 0.97Å | 1.00Å | |
N31 | H20 | sing | 0.97Å | 1.00Å | |
N30 | H21 | sing | 0.97Å | 1.00Å | |
N30 | H22 | sing | 0.97Å | 1.00Å | |
N5 | H23 | sing | 0.97Å | 1.00Å | |
C4 | H24 | sing | 1.09Å | 1.10Å | |
C6 | H25 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O11 | C10 | C9 | 111.2° | 109.2° |
C10 | O11 | C12 | 110.3° | 114.2° |
O11 | C10 | H9 | 109.0° | 109.5° |
O11 | C10 | H10 | 109.0° | 109.5° |
C10 | C9 | N1 | 109.3° | 108.4° |
C10 | C9 | H7 | 109.5° | 109.7° |
C10 | C9 | H8 | 109.5° | 109.8° |
C9 | C10 | H9 | 109.0° | 109.5° |
C9 | C10 | H10 | 109.0° | 109.5° |
C8 | C6 | C7 | 110.7° | 109.5° |
C8 | C6 | C4 | 111.8° | 109.5° |
C6 | C8 | H4 | 109.5° | 109.5° |
C6 | C8 | H5 | 109.5° | 109.4° |
C6 | C8 | H6 | 109.4° | 109.5° |
C8 | C6 | H25 | 107.0° | 109.5° |
C7 | C6 | C4 | 113.2° | 109.5° |
C6 | C7 | H1 | 109.5° | 109.5° |
C6 | C7 | H2 | 109.4° | 109.4° |
C6 | C7 | H3 | 109.5° | 109.5° |
C7 | C6 | H25 | 107.0° | 109.5° |
O11 | C12 | C13 | 111.5° | 109.2° |
O11 | C12 | H11 | 109.0° | 109.5° |
O11 | C12 | H12 | 109.0° | 109.5° |
C6 | C4 | C2 | 111.3° | 109.5° |
C6 | C4 | N5 | 113.3° | 109.5° |
C6 | C4 | H24 | 107.1° | 109.5° |
C4 | C6 | H25 | 106.8° | 109.4° |
C12 | C13 | N1 | 109.7° | 108.4° |
C13 | C12 | H11 | 108.9° | 109.5° |
C13 | C12 | H12 | 109.0° | 109.6° |
C12 | C13 | H13 | 109.4° | 109.6° |
C12 | C13 | H14 | 109.4° | 109.7° |
C9 | N1 | C13 | 112.1° | 118.0° |
C9 | N1 | C2 | 128.6° | 121.0° |
N1 | C9 | H7 | 109.5° | 109.7° |
N1 | C9 | H8 | 109.5° | 109.7° |
C13 | N1 | C2 | 119.3° | 120.9° |
N1 | C13 | H13 | 109.4° | 109.7° |
N1 | C13 | H14 | 109.4° | 109.7° |
N1 | C2 | C4 | 119.4° | 120.0° |
N1 | C2 | O3 | 121.2° | 120.0° |
C2 | C4 | N5 | 109.6° | 109.5° |
C4 | C2 | O3 | 119.3° | 120.0° |
C2 | C4 | H24 | 107.2° | 109.5° |
C4 | N5 | S24 | 122.8° | 120.0° |
C4 | N5 | H23 | 106.0° | 120.0° |
N5 | C4 | H24 | 108.1° | 109.5° |
N5 | S24 | O25 | 107.1° | 106.4° |
N5 | S24 | O26 | 106.2° | 106.4° |
N5 | S24 | C15 | 107.3° | 107.2° |
S24 | N5 | H23 | 106.0° | 120.0° |
O25 | S24 | O26 | 119.5° | 123.2° |
O25 | S24 | C15 | 108.2° | 106.4° |
O26 | S24 | C15 | 108.0° | 106.4° |
S24 | C15 | C14 | 120.2° | 119.5° |
S24 | C15 | C16 | 116.8° | 119.4° |
C15 | C14 | C19 | 119.8° | 121.0° |
C14 | C15 | C16 | 121.3° | 121.0° |
C15 | C14 | H15 | 120.1° | 119.5° |
C14 | C19 | C18 | 121.4° | 119.5° |
C19 | C14 | H15 | 120.1° | 119.6° |
C14 | C19 | H17 | 119.3° | 120.2° |
C15 | C16 | C17 | 120.4° | 119.5° |
C15 | C16 | H16 | 119.8° | 120.2° |
C19 | C18 | C17 | 118.1° | 119.6° |
C19 | C18 | C23 | 125.3° | 122.2° |
C18 | C19 | H17 | 119.3° | 120.3° |
CL27 | C23 | C18 | 119.8° | 120.6° |
CL27 | C23 | C22 | 118.4° | 120.6° |
C16 | C17 | C18 | 118.6° | 119.4° |
C16 | C17 | C20 | 124.2° | 122.1° |
C17 | C16 | H16 | 119.8° | 120.2° |
C17 | C18 | C23 | 116.6° | 118.2° |
C18 | C17 | C20 | 117.2° | 118.6° |
C18 | C23 | C22 | 121.8° | 118.8° |
C17 | C20 | N21 | 122.9° | 119.7° |
C17 | C20 | N28 | 116.7° | 120.1° |
C23 | C22 | N21 | 121.0° | 122.0° |
C23 | C22 | H18 | 119.5° | 119.0° |
C22 | N21 | C20 | 120.5° | 122.7° |
N21 | C22 | H18 | 119.5° | 119.1° |
N21 | C20 | N28 | 120.4° | 120.1° |
C20 | N28 | C29 | 127.6° | 120.0° |
C20 | N28 | H19 | 116.2° | 120.0° |
N28 | C29 | N31 | 119.8° | 120.0° |
N28 | C29 | N30 | 119.3° | 120.0° |
C29 | N28 | H19 | 116.2° | 120.0° |
N31 | C29 | N30 | 120.9° | 120.0° |
C29 | N31 | H20 | 112.0° | 120.0° |
C29 | N30 | H21 | 120.0° | 120.0° |
C29 | N30 | H22 | 120.0° | 120.0° |
H1 | C7 | H2 | 109.5° | 109.5° |
H1 | C7 | H3 | 109.5° | 109.5° |
H2 | C7 | H3 | 109.5° | 109.5° |
H4 | C8 | H5 | 109.5° | 109.4° |
H4 | C8 | H6 | 109.5° | 109.5° |
H5 | C8 | H6 | 109.5° | 109.5° |
H7 | C9 | H8 | 109.4° | 109.6° |
H9 | C10 | H10 | 109.5° | 109.5° |
H11 | C12 | H12 | 109.5° | 109.5° |
H13 | C13 | H14 | 109.5° | 109.7° |
H21 | N30 | H22 | 120.0° | 119.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O11 | C10 | C9 | H9 | 120.3° | 119.9° |
O11 | C10 | C9 | H10 | 120.3° | 120.0° |
C10 | O11 | C12 | C13 | 59.8° | 62.6° |
O11 | C10 | C9 | N1 | 57.0° | 52.3° |
O11 | C10 | C9 | H7 | 63.0° | 172.1° |
O11 | C10 | C9 | H8 | 176.9° | 67.4° |
O11 | C10 | H9 | H10 | 119.2° | 120.2° |
C10 | O11 | C12 | H11 | 60.5° | 57.3° |
C10 | O11 | C12 | H12 | 179.9° | 177.4° |
C9 | C10 | O11 | C12 | 60.2° | 62.6° |
C10 | C9 | N1 | H7 | 120.0° | 119.7° |
C10 | C9 | N1 | H8 | 120.0° | 119.8° |
C10 | C9 | N1 | C13 | 54.2° | 50.6° |
C10 | C9 | N1 | C2 | 124.1° | 129.5° |
C10 | C9 | H7 | H8 | 120.1° | 120.6° |
C9 | C10 | H9 | H10 | 119.2° | 120.1° |
C8 | C6 | C7 | C4 | 126.5° | 120.0° |
C8 | C6 | C7 | H25 | 116.2° | 120.0° |
C8 | C6 | C4 | H25 | 116.7° | 120.0° |
C8 | C6 | C4 | C2 | 165.5° | 56.8° |
C8 | C6 | C4 | N5 | 70.5° | 63.2° |
C8 | C6 | C7 | H1 | 180.0° | 54.8° |
C8 | C6 | C7 | H2 | 60.0° | 65.2° |
C8 | C6 | C7 | H3 | 60.0° | 174.9° |
C6 | C8 | H4 | H5 | 120.0° | 119.9° |
C6 | C8 | H4 | H6 | 120.0° | 120.0° |
C6 | C8 | H5 | H6 | 120.0° | 120.0° |
C8 | C6 | C4 | H24 | 48.7° | 176.8° |
C7 | C6 | C4 | H25 | 117.4° | 120.0° |
C7 | C6 | C4 | C2 | 68.6° | 63.2° |
C7 | C6 | C4 | N5 | 55.3° | 176.8° |
C6 | C7 | H1 | H2 | 120.0° | 120.0° |
C6 | C7 | H1 | H3 | 120.0° | 120.0° |
C6 | C7 | H2 | H3 | 120.0° | 120.0° |
C7 | C6 | C8 | H4 | 180.0° | 60.0° |
C7 | C6 | C8 | H5 | 60.0° | 180.0° |
C7 | C6 | C8 | H6 | 60.0° | 60.0° |
C7 | C6 | C4 | H24 | 174.5° | 56.8° |
O11 | C12 | C13 | H11 | 120.3° | 119.9° |
O11 | C12 | C13 | H12 | 120.3° | 120.0° |
O11 | C12 | C13 | N1 | 56.2° | 52.3° |
C12 | O11 | C10 | H9 | 179.5° | 177.5° |
C12 | O11 | C10 | H10 | 60.1° | 57.3° |
O11 | C12 | H11 | H12 | 119.1° | 120.1° |
O11 | C12 | C13 | H13 | 176.2° | 67.5° |
O11 | C12 | C13 | H14 | 63.9° | 172.1° |
C6 | C4 | C2 | N1 | 87.4° | 93.5° |
C6 | C4 | C2 | N5 | 126.0° | 120.0° |
C6 | C4 | C2 | H24 | 116.8° | 120.0° |
C6 | C4 | N5 | H24 | 118.5° | 120.0° |
C6 | C4 | C2 | O3 | 97.0° | 86.2° |
C6 | C4 | N5 | S24 | 153.6° | 95.0° |
C4 | C6 | C7 | H1 | 53.5° | 65.2° |
C4 | C6 | C7 | H2 | 66.4° | 174.8° |
C4 | C6 | C7 | H3 | 173.6° | 54.9° |
C4 | C6 | C8 | H4 | 52.8° | 60.0° |
C4 | C6 | C8 | H5 | 172.8° | 60.0° |
C4 | C6 | C8 | H6 | 67.2° | 180.0° |
C6 | C4 | N5 | H23 | 31.8° | 85.0° |
C12 | C13 | N1 | C9 | 53.8° | 50.6° |
C12 | C13 | N1 | H13 | 120.0° | 119.7° |
C12 | C13 | N1 | H14 | 120.0° | 119.7° |
C12 | C13 | N1 | C2 | 124.7° | 129.5° |
C13 | C12 | H11 | H12 | 119.0° | 120.2° |
C12 | C13 | H13 | H14 | 119.9° | 120.5° |
C9 | N1 | C13 | C2 | 178.5° | 180.0° |
C9 | N1 | C2 | C4 | 7.8° | 174.6° |
C9 | N1 | C2 | O3 | 176.7° | 5.1° |
N1 | C9 | H7 | H8 | 120.1° | 120.5° |
N1 | C9 | C10 | H9 | 177.2° | 172.3° |
N1 | C9 | C10 | H10 | 63.3° | 67.6° |
C9 | N1 | C13 | H13 | 173.8° | 69.2° |
C9 | N1 | C13 | H14 | 66.2° | 170.3° |
C13 | N1 | C2 | C4 | 174.0° | 5.4° |
C13 | N1 | C2 | O3 | 1.5° | 174.9° |
C13 | N1 | C9 | H7 | 65.8° | 170.3° |
C13 | N1 | C9 | H8 | 174.1° | 69.2° |
N1 | C13 | C12 | H11 | 64.2° | 67.6° |
N1 | C13 | C12 | H12 | 176.5° | 172.3° |
N1 | C13 | H13 | H14 | 119.9° | 120.6° |
N1 | C2 | C4 | O3 | 175.6° | 179.7° |
N1 | C2 | C4 | N5 | 146.6° | 146.5° |
C2 | N1 | C9 | H7 | 115.9° | 9.7° |
C2 | N1 | C9 | H8 | 4.2° | 110.7° |
C2 | N1 | C13 | H13 | 4.6° | 110.8° |
C2 | N1 | C13 | H14 | 115.3° | 9.7° |
N1 | C2 | C4 | H24 | 29.4° | 26.5° |
C2 | C4 | N5 | H24 | 116.6° | 120.0° |
C2 | C4 | N5 | S24 | 81.5° | 145.0° |
C2 | C4 | N5 | H23 | 156.6° | 35.0° |
C2 | C4 | C6 | H25 | 48.8° | 176.7° |
N5 | C4 | C2 | O3 | 29.1° | 33.8° |
C4 | N5 | S24 | H23 | 121.8° | 180.0° |
C4 | N5 | S24 | O25 | 43.7° | 48.5° |
C4 | N5 | S24 | O26 | 172.4° | 178.5° |
C4 | N5 | S24 | C15 | 72.3° | 65.0° |
N5 | C4 | C6 | H25 | 172.8° | 56.7° |
O3 | C2 | C4 | H24 | 146.2° | 153.8° |
N5 | S24 | O25 | O26 | 120.7° | 123.0° |
N5 | S24 | O25 | C15 | 115.4° | 114.1° |
N5 | S24 | O26 | C15 | 114.9° | 114.1° |
N5 | S24 | C15 | C14 | 87.2° | 90.0° |
N5 | S24 | C15 | C16 | 78.1° | 90.1° |
S24 | N5 | C4 | H24 | 35.0° | 25.0° |
O25 | S24 | O26 | C15 | 124.1° | 123.0° |
O25 | S24 | C15 | C14 | 28.0° | 156.4° |
O25 | S24 | C15 | C16 | 166.7° | 23.5° |
O25 | S24 | N5 | H23 | 78.2° | 131.5° |
O26 | S24 | C15 | C14 | 158.6° | 23.5° |
O26 | S24 | C15 | C16 | 36.1° | 156.4° |
O26 | S24 | N5 | H23 | 50.6° | 1.4° |
S24 | C15 | C14 | C16 | 164.6° | 179.9° |
S24 | C15 | C14 | C19 | 158.8° | 179.9° |
S24 | C15 | C16 | C17 | 158.6° | 179.9° |
S24 | C15 | C14 | H15 | 21.2° | 0.3° |
S24 | C15 | C16 | H16 | 21.4° | 0.0° |
C15 | S24 | N5 | H23 | 165.9° | 114.9° |
C15 | C14 | C19 | H15 | 180.0° | 179.7° |
C15 | C14 | C19 | C18 | 1.1° | 0.0° |
C14 | C15 | C16 | C17 | 6.5° | 0.0° |
C14 | C15 | C16 | H16 | 173.5° | 179.9° |
C15 | C14 | C19 | H17 | 178.9° | 180.0° |
C19 | C14 | C15 | C16 | 5.8° | 0.0° |
C14 | C19 | C18 | H17 | 180.0° | 179.9° |
C14 | C19 | C18 | C17 | 2.8° | 0.1° |
C14 | C19 | C18 | C23 | 176.3° | 180.0° |
C15 | C16 | C17 | H16 | 180.0° | 179.9° |
C15 | C16 | C17 | C18 | 2.4° | 0.1° |
C15 | C16 | C17 | C20 | 175.6° | 179.9° |
C16 | C15 | C14 | H15 | 174.2° | 179.8° |
C19 | C18 | C23 | CL27 | 1.8° | 0.1° |
C19 | C18 | C17 | C16 | 2.1° | 0.1° |
C19 | C18 | C17 | C23 | 179.2° | 179.9° |
C19 | C18 | C17 | C20 | 179.8° | 180.0° |
C19 | C18 | C23 | C22 | 179.1° | 180.0° |
C18 | C19 | C14 | H15 | 178.9° | 179.7° |
CL27 | C23 | C18 | C17 | 177.3° | 180.0° |
CL27 | C23 | C18 | C22 | 177.3° | 179.9° |
CL27 | C23 | C22 | N21 | 177.6° | 180.0° |
CL27 | C23 | C22 | H18 | 2.4° | 0.0° |
C16 | C17 | C18 | C20 | 178.2° | 179.9° |
C16 | C17 | C18 | C23 | 177.1° | 180.0° |
C16 | C17 | C20 | N21 | 176.0° | 179.9° |
C16 | C17 | C20 | N28 | 4.0° | 0.1° |
C17 | C18 | C23 | C22 | 0.0° | 0.1° |
C18 | C17 | C20 | N21 | 2.0° | 0.0° |
C18 | C17 | C20 | N28 | 177.9° | 180.0° |
C18 | C17 | C16 | H16 | 177.5° | 180.0° |
C17 | C18 | C19 | H17 | 177.2° | 180.0° |
C23 | C18 | C17 | C20 | 1.1° | 0.1° |
C18 | C23 | C22 | N21 | 0.2° | 0.0° |
C23 | C18 | C19 | H17 | 3.7° | 0.1° |
C18 | C23 | C22 | H18 | 179.8° | 179.9° |
C17 | C20 | N21 | C22 | 1.9° | 0.0° |
C17 | C20 | N21 | N28 | 180.0° | 180.0° |
C17 | C20 | N28 | C29 | 178.1° | 174.8° |
C20 | C17 | C16 | H16 | 4.4° | 0.1° |
C17 | C20 | N28 | H19 | 1.8° | 5.1° |
C23 | C22 | N21 | H18 | 180.0° | 180.0° |
C23 | C22 | N21 | C20 | 0.7° | 0.0° |
C22 | N21 | C20 | N28 | 178.1° | 179.9° |
N21 | C20 | N28 | C29 | 1.8° | 5.2° |
C20 | N21 | C22 | H18 | 179.3° | 180.0° |
N21 | C20 | N28 | H19 | 178.2° | 174.8° |
C20 | N28 | C29 | H19 | 180.0° | 179.9° |
C20 | N28 | C29 | N31 | 179.5° | 5.2° |
C20 | N28 | C29 | N30 | 3.0° | 174.8° |
N28 | C29 | N31 | N30 | 177.5° | 180.0° |
N28 | C29 | N31 | H20 | 177.4° | 179.9° |
N28 | C29 | N30 | H21 | 177.5° | 5.1° |
N28 | C29 | N30 | H22 | 2.5° | 174.9° |
N31 | C29 | N28 | H19 | 0.6° | 174.9° |
N31 | C29 | N30 | H21 | 0.0° | 174.9° |
N31 | C29 | N30 | H22 | 180.0° | 5.1° |
N30 | C29 | N28 | H19 | 176.9° | 5.1° |
N30 | C29 | N31 | H20 | 0.0° | 0.1° |
C29 | N30 | H21 | H22 | 180.0° | 180.0° |
H1 | C7 | H2 | H3 | 120.0° | 120.0° |
H1 | C7 | C6 | H25 | 63.8° | 174.8° |
H2 | C7 | C6 | H25 | 176.2° | 54.8° |
H3 | C7 | C6 | H25 | 56.2° | 65.1° |
H4 | C8 | H5 | H6 | 120.0° | 120.1° |
H4 | C8 | C6 | H25 | 63.8° | 179.9° |
H5 | C8 | C6 | H25 | 56.2° | 60.0° |
H6 | C8 | C6 | H25 | 176.2° | 60.0° |
H7 | C9 | C10 | H9 | 57.3° | 68.0° |
H7 | C9 | C10 | H10 | 176.7° | 52.1° |
H8 | C9 | C10 | H9 | 62.8° | 52.5° |
H8 | C9 | C10 | H10 | 56.7° | 172.6° |
H11 | C12 | C13 | H13 | 55.9° | 172.7° |
H11 | C12 | C13 | H14 | 175.8° | 52.2° |
H12 | C12 | C13 | H13 | 63.5° | 52.5° |
H12 | C12 | C13 | H14 | 56.4° | 68.0° |
H15 | C14 | C19 | H17 | 1.1° | 0.2° |
H23 | N5 | C4 | H24 | 86.8° | 155.0° |
H24 | C4 | C6 | H25 | 68.1° | 63.3° |