R2P
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| ND1 | SE1 | sing | 1.56Å | 1.69Å | Aromatic |
| ND1 | CG | doub | 1.30Å | 1.32Å | Aromatic |
| N | CA | sing | 1.47Å | 1.52Å | |
| CA | C | sing | 1.51Å | 1.55Å | |
| CA | CB | sing | 1.53Å | 1.59Å | |
| C | O | doub | 1.21Å | 1.25Å | |
| C | OXT | sing | 1.34Å | 1.27Å | |
| OD2 | CD2 | sing | 1.36Å | 1.26Å | |
| CD2 | NE2 | doub | 1.31Å | 1.34Å | Aromatic |
| CD2 | CG | sing | 1.38Å | 1.45Å | Aromatic |
| NE2 | SE1 | sing | 1.69Å | 1.65Å | Aromatic |
| CG | CB | sing | 1.51Å | 1.53Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| OD2 | HOD2 | sing | 0.97Å | 0.95Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| CB | HBA | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| SE1 | ND1 | CG | 109.9° | 108.9° |
| ND1 | SE1 | NE2 | 95.5° | 97.1° |
| ND1 | CG | CD2 | 111.5° | 115.4° |
| ND1 | CG | CB | 126.0° | 122.3° |
| N | CA | C | 106.5° | 109.5° |
| N | CA | CB | 118.6° | 109.4° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 110.9° |
| N | CA | HA | 105.2° | 109.5° |
| C | CA | CB | 109.0° | 109.5° |
| CA | C | O | 114.6° | 120.0° |
| CA | C | OXT | 118.2° | 120.0° |
| C | CA | HA | 115.5° | 109.5° |
| CA | CB | CG | 111.2° | 109.5° |
| CB | CA | HA | 102.4° | 109.5° |
| CA | CB | HB | 108.9° | 109.5° |
| CA | CB | HBA | 108.5° | 109.5° |
| O | C | OXT | 127.2° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| OD2 | CD2 | NE2 | 124.1° | 123.7° |
| OD2 | CD2 | CG | 122.5° | 123.7° |
| CD2 | OD2 | HOD2 | 109.5° | 114.0° |
| NE2 | CD2 | CG | 113.4° | 112.6° |
| CD2 | NE2 | SE1 | 109.6° | 105.9° |
| CD2 | CG | CB | 122.5° | 122.3° |
| CG | CB | HB | 108.9° | 109.5° |
| CG | CB | HBA | 108.5° | 109.5° |
| H | N | H2 | 109.5° | 111.0° |
| HB | CB | HBA | 110.8° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| ND1 | SE1 | NE2 | CD2 | 0.1° | 0.0° |
| SE1 | ND1 | CG | CD2 | 0.1° | 0.1° |
| SE1 | ND1 | CG | CB | 179.8° | 180.0° |
| ND1 | CG | CB | CA | 0.4° | 90.1° |
| ND1 | CG | CD2 | OD2 | 180.0° | 180.0° |
| ND1 | CG | CD2 | NE2 | 0.2° | 0.1° |
| ND1 | CG | CD2 | CB | 179.7° | 179.9° |
| CG | ND1 | SE1 | NE2 | 0.0° | 0.0° |
| ND1 | CG | CB | HB | 120.4° | 30.0° |
| ND1 | CG | CB | HBA | 118.9° | 150.0° |
| N | CA | C | CB | 129.1° | 120.0° |
| N | CA | C | HA | 116.3° | 120.0° |
| N | CA | CB | HA | 115.2° | 120.0° |
| N | CA | C | O | 16.4° | 20.0° |
| N | CA | C | OXT | 164.4° | 160.0° |
| N | CA | CB | CG | 57.6° | 65.0° |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | CB | HB | 177.6° | 175.0° |
| N | CA | CB | HBA | 61.7° | 55.0° |
| C | CA | CB | HA | 122.8° | 120.0° |
| CA | C | O | OXT | 179.2° | 180.0° |
| C | CA | CB | CG | 179.6° | 175.0° |
| C | CA | N | H | 118.6° | 60.0° |
| C | CA | N | H2 | 121.4° | 64.0° |
| C | CA | CB | HB | 60.4° | 55.0° |
| C | CA | CB | HBA | 60.3° | 65.0° |
| CA | C | OXT | HXT | 179.1° | 179.9° |
| CB | CA | C | O | 145.5° | 100.0° |
| CB | CA | C | OXT | 35.3° | 80.0° |
| CA | CB | CG | CD2 | 179.9° | 90.0° |
| CA | CB | CG | HB | 120.0° | 120.0° |
| CA | CB | CG | HBA | 119.3° | 120.0° |
| CB | CA | N | H | 118.1° | 60.0° |
| CB | CA | N | H2 | 1.9° | 176.1° |
| CA | CB | HB | HBA | 119.3° | 120.0° |
| O | C | CA | HA | 99.9° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| OXT | C | CA | HA | 79.3° | 40.0° |
| OD2 | CD2 | NE2 | CG | 179.9° | 179.9° |
| OD2 | CD2 | NE2 | SE1 | 180.0° | 179.9° |
| OD2 | CD2 | CG | CB | 0.2° | 0.1° |
| NE2 | CD2 | CG | CB | 179.9° | 180.0° |
| NE2 | CD2 | OD2 | HOD2 | 103.0° | 90.1° |
| CG | CD2 | NE2 | SE1 | 0.1° | 0.0° |
| CG | CD2 | OD2 | HOD2 | 77.2° | 90.0° |
| CD2 | CG | CB | HB | 59.9° | 149.9° |
| CD2 | CG | CB | HBA | 60.8° | 29.9° |
| CG | CB | CA | HA | 57.6° | 55.0° |
| CG | CB | HB | HBA | 119.3° | 120.0° |
| H | N | CA | HA | 4.4° | 180.0° |
| H2 | N | CA | HA | 115.6° | 56.0° |
| HA | CA | CB | HB | 62.4° | 65.0° |
| HA | CA | CB | HBA | 176.8° | 175.0° |
