R00
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | C1 | sing | 1.47Å | 1.48Å | |
N | H1 | sing | 1.01Å | 1.00Å | |
C1 | C2 | sing | 1.53Å | 1.53Å | |
C1 | C3 | sing | 1.53Å | 1.53Å | |
C1 | H | sing | 1.09Å | 1.10Å | |
C2 | O1 | sing | 1.43Å | 1.41Å | |
C2 | C10 | sing | 1.53Å | 1.53Å | |
C2 | H3 | sing | 1.09Å | 1.10Å | |
O1 | H4 | sing | 0.97Å | 0.95Å | |
C3 | C4 | sing | 1.51Å | 1.48Å | |
C3 | H5 | sing | 1.09Å | 1.10Å | |
C3 | H6 | sing | 1.09Å | 1.10Å | |
C4 | C5 | doub | 1.38Å | 1.39Å | Aromatic |
C4 | C6 | sing | 1.38Å | 1.39Å | Aromatic |
C5 | C7 | sing | 1.38Å | 1.39Å | Aromatic |
C5 | H7 | sing | 1.08Å | 1.08Å | |
C6 | C8 | doub | 1.38Å | 1.39Å | Aromatic |
C6 | H8 | sing | 1.08Å | 1.08Å | |
C7 | C9 | doub | 1.38Å | 1.39Å | Aromatic |
C7 | H9 | sing | 1.08Å | 1.08Å | |
C8 | C9 | sing | 1.38Å | 1.39Å | Aromatic |
C8 | H10 | sing | 1.08Å | 1.08Å | |
C9 | H11 | sing | 1.08Å | 1.08Å | |
C10 | H12 | sing | 1.09Å | 1.10Å | |
C10 | H13 | sing | 1.09Å | 1.10Å | |
C10 | N2 | sing | 1.47Å | 1.44Å | |
N2 | C11 | sing | 1.47Å | 1.46Å | |
N2 | H14 | sing | 1.01Å | 1.00Å | |
C11 | C | sing | 1.51Å | 1.52Å | |
C11 | C13 | sing | 1.53Å | 1.53Å | |
C11 | H15 | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.32Å | |
C13 | C14 | sing | 1.51Å | 1.51Å | |
C13 | H16 | sing | 1.09Å | 1.10Å | |
C13 | H17 | sing | 1.09Å | 1.10Å | |
C14 | C15 | doub | 1.38Å | 1.39Å | Aromatic |
C14 | C16 | sing | 1.38Å | 1.39Å | Aromatic |
C15 | C17 | sing | 1.38Å | 1.40Å | Aromatic |
C15 | H18 | sing | 1.08Å | 1.08Å | |
C16 | C18 | doub | 1.38Å | 1.40Å | Aromatic |
C16 | H19 | sing | 1.08Å | 1.08Å | |
C17 | C19 | doub | 1.38Å | 1.39Å | Aromatic |
C17 | H20 | sing | 1.08Å | 1.08Å | |
C18 | C19 | sing | 1.38Å | 1.39Å | Aromatic |
C18 | H21 | sing | 1.08Å | 1.08Å | |
C19 | H22 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
N | H2 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C1 | N | H1 | 109.5° | 111.0° |
N | C1 | C2 | 112.9° | 109.5° |
N | C1 | C3 | 111.2° | 109.5° |
N | C1 | H | 105.4° | 109.5° |
C1 | N | H2 | 109.5° | 111.0° |
H1 | N | H2 | 109.5° | 111.0° |
C2 | C1 | C3 | 108.3° | 109.5° |
C2 | C1 | H | 108.6° | 109.5° |
C1 | C2 | O1 | 109.4° | 109.5° |
C1 | C2 | C10 | 110.8° | 109.5° |
C1 | C2 | H3 | 108.6° | 109.5° |
C3 | C1 | H | 110.4° | 109.5° |
C1 | C3 | C4 | 113.6° | 109.5° |
C1 | C3 | H5 | 108.1° | 109.5° |
C1 | C3 | H6 | 108.1° | 109.5° |
O1 | C2 | C10 | 109.3° | 109.5° |
O1 | C2 | H3 | 110.1° | 109.4° |
C2 | O1 | H4 | 109.5° | 114.0° |
C10 | C2 | H3 | 108.7° | 109.5° |
C2 | C10 | H12 | 109.2° | 109.4° |
C2 | C10 | H13 | 109.2° | 109.4° |
C2 | C10 | N2 | 110.2° | 109.5° |
C4 | C3 | H5 | 108.1° | 109.4° |
C4 | C3 | H6 | 108.1° | 109.5° |
C3 | C4 | C5 | 120.4° | 120.0° |
C3 | C4 | C6 | 120.4° | 120.0° |
H5 | C3 | H6 | 110.8° | 109.4° |
C5 | C4 | C6 | 119.1° | 120.0° |
C4 | C5 | C7 | 120.8° | 120.0° |
C4 | C5 | H7 | 119.6° | 120.0° |
C4 | C6 | C8 | 120.5° | 120.0° |
C4 | C6 | H8 | 119.8° | 120.0° |
C7 | C5 | H7 | 119.6° | 120.0° |
C5 | C7 | C9 | 119.7° | 120.0° |
C5 | C7 | H9 | 120.1° | 120.0° |
C8 | C6 | H8 | 119.7° | 120.0° |
C6 | C8 | C9 | 120.1° | 120.0° |
C6 | C8 | H10 | 119.9° | 120.0° |
C9 | C7 | H9 | 120.1° | 120.0° |
C7 | C9 | C8 | 119.8° | 120.0° |
C7 | C9 | H11 | 120.1° | 120.0° |
C9 | C8 | H10 | 120.0° | 120.0° |
C8 | C9 | H11 | 120.1° | 120.0° |
H12 | C10 | H13 | 109.7° | 109.5° |
H12 | C10 | N2 | 109.2° | 109.5° |
H13 | C10 | N2 | 109.2° | 109.5° |
C10 | N2 | C11 | 114.4° | 111.0° |
C10 | N2 | H14 | 107.8° | 111.0° |
C11 | N2 | H14 | 107.8° | 111.0° |
N2 | C11 | C | 114.9° | 109.5° |
N2 | C11 | C13 | 111.5° | 109.5° |
N2 | C11 | H15 | 103.9° | 109.5° |
C | C11 | C13 | 108.6° | 109.5° |
C | C11 | H15 | 107.1° | 109.5° |
C11 | C | O | 122.3° | 120.0° |
C11 | C | OXT | 114.6° | 120.0° |
C13 | C11 | H15 | 110.7° | 109.5° |
C11 | C13 | C14 | 113.4° | 109.5° |
C11 | C13 | H16 | 108.2° | 109.5° |
C11 | C13 | H17 | 108.2° | 109.5° |
O | C | OXT | 123.1° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
C14 | C13 | H16 | 108.2° | 109.4° |
C14 | C13 | H17 | 108.2° | 109.5° |
C13 | C14 | C15 | 120.8° | 120.0° |
C13 | C14 | C16 | 120.4° | 120.0° |
H16 | C13 | H17 | 110.8° | 109.5° |
C15 | C14 | C16 | 118.8° | 120.0° |
C14 | C15 | C17 | 120.8° | 120.0° |
C14 | C15 | H18 | 119.6° | 120.0° |
C14 | C16 | C18 | 120.9° | 120.0° |
C14 | C16 | H19 | 119.5° | 120.0° |
C17 | C15 | H18 | 119.6° | 120.0° |
C15 | C17 | C19 | 119.8° | 120.0° |
C15 | C17 | H20 | 120.1° | 120.0° |
C18 | C16 | H19 | 119.5° | 120.0° |
C16 | C18 | C19 | 119.9° | 120.0° |
C16 | C18 | H21 | 120.0° | 120.0° |
C19 | C17 | H20 | 120.1° | 120.0° |
C17 | C19 | C18 | 119.8° | 120.0° |
C17 | C19 | H22 | 120.1° | 120.0° |
C19 | C18 | H21 | 120.0° | 120.0° |
C18 | C19 | H22 | 120.1° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C1 | N | H1 | H2 | 120.0° | 123.9° |
N | C1 | C2 | C3 | 123.6° | 120.0° |
N | C1 | C2 | H | 116.6° | 120.0° |
N | C1 | C3 | H | 116.7° | 120.0° |
N | C1 | C2 | O1 | 61.7° | 60.0° |
N | C1 | C2 | C10 | 58.9° | 60.0° |
N | C1 | C2 | H3 | 178.2° | 180.0° |
N | C1 | C3 | C4 | 52.6° | 65.0° |
N | C1 | C3 | H5 | 67.4° | 55.0° |
N | C1 | C3 | H6 | 172.6° | 175.0° |
H1 | N | C1 | C2 | 180.0° | 63.9° |
H1 | N | C1 | C3 | 58.1° | 176.0° |
H1 | N | C1 | H | 61.6° | 56.0° |
C2 | C1 | C3 | H | 118.7° | 120.0° |
C1 | C2 | O1 | C10 | 121.5° | 120.0° |
C1 | C2 | O1 | H3 | 119.2° | 120.0° |
C1 | C2 | C10 | H3 | 119.2° | 120.0° |
C1 | C2 | O1 | H4 | 180.0° | 60.0° |
C2 | C1 | C3 | C4 | 177.2° | 175.0° |
C2 | C1 | C3 | H5 | 57.2° | 65.0° |
C2 | C1 | C3 | H6 | 62.8° | 55.0° |
C1 | C2 | C10 | H12 | 66.2° | 60.0° |
C1 | C2 | C10 | H13 | 53.8° | 60.0° |
C1 | C2 | C10 | N2 | 173.8° | 180.0° |
C2 | C1 | N | H2 | 60.0° | 60.0° |
C3 | C1 | C2 | O1 | 61.9° | 60.0° |
C3 | C1 | C2 | C10 | 177.5° | 180.0° |
C3 | C1 | C2 | H3 | 58.2° | 59.9° |
C1 | C3 | C4 | H5 | 120.0° | 120.0° |
C1 | C3 | C4 | H6 | 120.0° | 120.1° |
C1 | C3 | H5 | H6 | 118.3° | 120.0° |
C1 | C3 | C4 | C5 | 91.8° | 90.0° |
C1 | C3 | C4 | C6 | 85.8° | 90.3° |
C3 | C1 | N | H2 | 178.1° | 60.0° |
H | C1 | C2 | O1 | 178.2° | 180.0° |
H | C1 | C2 | C10 | 57.6° | 60.0° |
H | C1 | C2 | H3 | 61.6° | 60.1° |
H | C1 | C3 | C4 | 64.1° | 55.0° |
H | C1 | C3 | H5 | 175.9° | 175.0° |
H | C1 | C3 | H6 | 55.9° | 65.0° |
H | C1 | N | H2 | 58.4° | 180.0° |
O1 | C2 | C10 | H3 | 120.1° | 119.9° |
O1 | C2 | C10 | H12 | 54.5° | 60.1° |
O1 | C2 | C10 | H13 | 174.5° | 180.0° |
O1 | C2 | C10 | N2 | 65.5° | 59.9° |
C10 | C2 | O1 | H4 | 58.5° | 60.0° |
C2 | C10 | H12 | H13 | 119.7° | 119.9° |
C2 | C10 | H12 | N2 | 120.6° | 120.0° |
C2 | C10 | H13 | N2 | 120.6° | 120.0° |
C2 | C10 | N2 | C11 | 131.8° | 180.0° |
C2 | C10 | N2 | H14 | 11.8° | 56.1° |
H3 | C2 | O1 | H4 | 60.8° | 180.0° |
H3 | C2 | C10 | H12 | 174.6° | 180.0° |
H3 | C2 | C10 | H13 | 65.4° | 60.1° |
H3 | C2 | C10 | N2 | 54.6° | 60.0° |
C4 | C3 | H5 | H6 | 118.3° | 119.9° |
C3 | C4 | C5 | C6 | 177.6° | 179.8° |
C3 | C4 | C5 | C7 | 177.4° | 180.0° |
C3 | C4 | C5 | H7 | 2.6° | 0.0° |
C3 | C4 | C6 | C8 | 177.3° | 180.0° |
C3 | C4 | C6 | H8 | 2.8° | 0.1° |
H5 | C3 | C4 | C5 | 28.2° | 30.0° |
H5 | C3 | C4 | C6 | 154.2° | 149.7° |
H6 | C3 | C4 | C5 | 148.2° | 150.0° |
H6 | C3 | C4 | C6 | 34.2° | 29.8° |
C4 | C5 | C7 | H7 | 180.0° | 180.0° |
C5 | C4 | C6 | C8 | 0.3° | 0.2° |
C5 | C4 | C6 | H8 | 179.6° | 179.7° |
C4 | C5 | C7 | C9 | 0.0° | 0.0° |
C4 | C5 | C7 | H9 | 180.0° | 180.0° |
C6 | C4 | C5 | C7 | 0.2° | 0.3° |
C6 | C4 | C5 | H7 | 179.8° | 179.8° |
C4 | C6 | C8 | H8 | 180.0° | 179.9° |
C4 | C6 | C8 | C9 | 0.3° | 0.0° |
C4 | C6 | C8 | H10 | 179.8° | 179.9° |
C5 | C7 | C9 | H9 | 180.0° | 180.0° |
C5 | C7 | C9 | C8 | 0.1° | 0.2° |
C5 | C7 | C9 | H11 | 179.9° | 180.0° |
H7 | C5 | C7 | C9 | 180.0° | 180.0° |
H7 | C5 | C7 | H9 | 0.0° | 0.0° |
C6 | C8 | C9 | C7 | 0.1° | 0.3° |
C6 | C8 | C9 | H10 | 180.0° | 180.0° |
C6 | C8 | C9 | H11 | 179.9° | 179.9° |
H8 | C6 | C8 | C9 | 179.7° | 179.9° |
H8 | C6 | C8 | H10 | 0.3° | 0.0° |
C7 | C9 | C8 | H11 | 180.0° | 179.8° |
C7 | C9 | C8 | H10 | 180.0° | 179.7° |
H9 | C7 | C9 | C8 | 179.9° | 179.8° |
H9 | C7 | C9 | H11 | 0.1° | 0.0° |
H10 | C8 | C9 | H11 | 0.0° | 0.1° |
H12 | C10 | H13 | N2 | 119.7° | 120.1° |
H12 | C10 | N2 | C11 | 108.2° | 60.1° |
H12 | C10 | N2 | H14 | 131.8° | 176.0° |
H13 | C10 | N2 | C11 | 11.8° | 60.0° |
H13 | C10 | N2 | H14 | 108.2° | 63.9° |
C10 | N2 | C11 | H14 | 120.0° | 123.9° |
C10 | N2 | C11 | C | 66.8° | 85.0° |
C10 | N2 | C11 | C13 | 57.3° | 155.0° |
C10 | N2 | C11 | H15 | 176.6° | 35.0° |
N2 | C11 | C | C13 | 125.6° | 120.0° |
N2 | C11 | C | H15 | 114.8° | 120.0° |
N2 | C11 | C13 | H15 | 115.1° | 120.0° |
N2 | C11 | C | O | 56.7° | 0.0° |
N2 | C11 | C | OXT | 123.8° | 180.0° |
N2 | C11 | C13 | C14 | 179.2° | 65.0° |
N2 | C11 | C13 | H16 | 59.3° | 55.0° |
N2 | C11 | C13 | H17 | 60.8° | 175.0° |
H14 | N2 | C11 | C | 53.1° | 151.0° |
H14 | N2 | C11 | C13 | 177.3° | 31.0° |
H14 | N2 | C11 | H15 | 63.5° | 89.0° |
C | C11 | C13 | H15 | 117.3° | 120.0° |
C11 | C | O | OXT | 179.5° | 180.0° |
C | C11 | C13 | C14 | 53.2° | 175.0° |
C | C11 | C13 | H16 | 173.2° | 65.0° |
C | C11 | C13 | H17 | 66.8° | 55.0° |
C11 | C | OXT | HXT | 179.6° | 180.0° |
C13 | C11 | C | O | 69.0° | 120.0° |
C13 | C11 | C | OXT | 110.6° | 60.0° |
C11 | C13 | C14 | H16 | 120.0° | 120.0° |
C11 | C13 | C14 | H17 | 120.0° | 120.0° |
C11 | C13 | H16 | H17 | 118.4° | 120.0° |
C11 | C13 | C14 | C15 | 121.0° | 90.0° |
C11 | C13 | C14 | C16 | 58.1° | 90.3° |
H15 | C11 | C | O | 171.4° | 120.0° |
H15 | C11 | C | OXT | 9.0° | 60.0° |
H15 | C11 | C13 | C14 | 64.1° | 55.0° |
H15 | C11 | C13 | H16 | 55.9° | 175.0° |
H15 | C11 | C13 | H17 | 175.9° | 65.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
C14 | C13 | H16 | H17 | 118.4° | 120.0° |
C13 | C14 | C15 | C16 | 179.1° | 179.7° |
C13 | C14 | C15 | C17 | 179.1° | 180.0° |
C13 | C14 | C15 | H18 | 0.9° | 0.0° |
C13 | C14 | C16 | C18 | 179.2° | 180.0° |
C13 | C14 | C16 | H19 | 0.8° | 0.0° |
H16 | C13 | C14 | C15 | 119.0° | 30.0° |
H16 | C13 | C14 | C16 | 61.9° | 149.7° |
H17 | C13 | C14 | C15 | 1.0° | 150.0° |
H17 | C13 | C14 | C16 | 178.1° | 29.7° |
C14 | C15 | C17 | H18 | 180.0° | 180.0° |
C15 | C14 | C16 | C18 | 0.1° | 0.3° |
C15 | C14 | C16 | H19 | 179.9° | 179.7° |
C14 | C15 | C17 | C19 | 0.1° | 0.0° |
C14 | C15 | C17 | H20 | 180.0° | 180.0° |
C16 | C14 | C15 | C17 | 0.0° | 0.2° |
C16 | C14 | C15 | H18 | 180.0° | 179.7° |
C14 | C16 | C18 | H19 | 180.0° | 180.0° |
C14 | C16 | C18 | C19 | 0.1° | 0.1° |
C14 | C16 | C18 | H21 | 179.8° | 180.0° |
C15 | C17 | C19 | H20 | 180.0° | 180.0° |
C15 | C17 | C19 | C18 | 0.1° | 0.2° |
C15 | C17 | C19 | H22 | 180.0° | 179.9° |
H18 | C15 | C17 | C19 | 179.9° | 179.9° |
H18 | C15 | C17 | H20 | 0.0° | 0.1° |
C16 | C18 | C19 | C17 | 0.1° | 0.2° |
C16 | C18 | C19 | H21 | 180.0° | 179.9° |
C16 | C18 | C19 | H22 | 179.9° | 179.9° |
H19 | C16 | C18 | C19 | 179.9° | 179.9° |
H19 | C16 | C18 | H21 | 0.2° | 0.0° |
C17 | C19 | C18 | H22 | 180.0° | 179.9° |
C17 | C19 | C18 | H21 | 179.9° | 179.7° |
H20 | C17 | C19 | C18 | 180.0° | 179.8° |
H20 | C17 | C19 | H22 | 0.0° | 0.1° |
H21 | C18 | C19 | H22 | 0.1° | 0.2° |