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SummaryGeometryRelated PDB entries

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Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O01C08doub1.21Å1.43Å
O02C01doub1.21Å1.21Å
O05C08sing1.35Å1.24Å
C08C02sing1.49Å1.36Å
C01C04sing1.51Å1.50Å
C01O03sing1.34Å1.34Å
C02C03sing1.51Å1.59Å
C02O04doub1.21Å1.22Å
C04C03sing1.53Å1.61Å
C03C05sing1.53Å1.54Å
C05C06sing1.53Å1.54Å
C06C07sing1.53Å1.53Å
C03H01sing1.09Å1.10Å
C04H03sing1.09Å1.10Å
C04H02sing1.09Å1.10Å
C05H04sing1.09Å1.10Å
C05H05sing1.09Å1.10Å
C06H07sing1.09Å1.10Å
C06H06sing1.09Å1.10Å
C07H10sing1.09Å1.10Å
C07H08sing1.09Å1.10Å
C07H09sing1.09Å1.10Å
O03H1sing0.97Å0.95Å
O05H2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O01C08O05116.4°120.0°
O01C08C02126.1°120.0°
O02C01C04117.5°120.0°
O02C01O03120.9°120.0°
O05C08C02117.5°120.0°
C08O05H2109.5°117.1°
C08C02C03114.2°120.0°
C08C02O04128.8°120.0°
C04C01O03121.5°120.0°
C01C04C03118.3°109.4°
C01C04H03107.2°109.5°
C01C04H02107.2°109.5°
C01O03H1109.5°117.0°
C03C02O04117.0°120.0°
C02C03C04110.0°109.5°
C02C03C05114.3°109.5°
C02C03H01103.7°109.5°
C04C03C05119.3°109.5°
C04C03H01103.5°109.5°
C03C04H03107.2°109.5°
C03C04H02107.2°109.5°
C03C05C06117.1°109.5°
C05C03H01104.1°109.5°
C03C05H04107.5°109.5°
C03C05H05107.5°109.4°
C05C06C07111.1°109.5°
C06C05H04107.5°109.5°
C06C05H05107.6°109.5°
C05C06H07109.1°109.5°
C05C06H06109.1°109.5°
C07C06H07109.1°109.5°
C07C06H06109.0°109.5°
C06C07H10109.5°109.5°
C06C07H08109.4°109.4°
C06C07H09109.5°109.5°
H03C04H02109.5°109.5°
H04C05H05109.5°109.5°
H07C06H06109.5°109.5°
H10C07H08109.5°109.5°
H10C07H09109.5°109.5°
H08C07H09109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C08O05C02179.8°180.0°
O01C08C02C036.3°0.0°
O01C08C02O04174.2°180.0°
O01C08O05H20.0°0.0°
O02C01C04O03176.0°179.7°
O02C01C04C0359.5°4.3°
O02C01C04H0361.8°115.7°
O02C01C04H02179.3°124.3°
O02C01O03H10.0°0.3°
O05C08C02C03173.5°180.0°
O05C08C02O046.0°0.0°
C08C02C03O04179.5°180.0°
C08C02C03C04142.1°150.0°
C08C02C03C0580.5°90.0°
C08C02C03H0132.1°30.0°
C02C08O05H2179.8°180.0°
C01C04C03C02171.6°66.2°
C01C04C03H03121.3°120.0°
C01C04C03H02121.3°120.0°
C01C04C03C0553.5°173.8°
C01C04C03H0161.4°53.8°
C01C04H03H02116.0°120.0°
C04C01O03H1175.8°180.0°
O03C01C04C03124.6°175.5°
O03C01C04H03114.2°64.5°
O03C01C04H023.3°55.5°
C02C03C04C05134.9°120.0°
C02C03C04H01110.2°120.0°
C02C03C05H01112.3°120.0°
C02C03C05C0627.0°174.3°
C02C03C04H0350.4°53.8°
C02C03C04H0267.1°173.8°
C02C03C05H04148.1°54.3°
C02C03C05H0594.2°65.7°
O04C02C03C0438.3°30.0°
O04C02C03C0599.0°90.0°
O04C02C03H01148.4°150.0°
C04C03C05H01114.6°120.0°
C04C03C05C06106.1°65.7°
C03C04H03H02116.0°120.0°
C04C03C05H0415.0°174.3°
C04C03C05H05132.8°54.3°
C03C05C06H04121.1°120.0°
C03C05C06H05121.1°120.0°
C03C05C06C07146.7°174.8°
C05C03C04H03174.7°66.2°
C05C03C04H0267.8°53.8°
C03C05H04H05116.5°120.0°
C03C05C06H0793.0°65.2°
C03C05C06H0626.5°54.7°
C05C06C07H07120.2°120.0°
C05C06C07H06120.2°120.0°
C06C05C03H01139.3°54.3°
C06C05H04H05116.6°120.0°
C05C06H07H06119.3°120.0°
C05C06C07H10180.0°180.0°
C05C06C07H0860.0°60.0°
C05C06C07H0960.0°60.0°
C07C06C05H0425.6°54.8°
C07C06C05H0592.2°65.3°
C07C06H07H06119.3°120.0°
C06C07H10H08120.0°119.9°
C06C07H10H09120.0°120.0°
C06C07H08H09120.0°120.0°
H01C03C04H0359.8°173.8°
H01C03C04H02177.3°66.2°
H01C03C05H0499.6°65.7°
H01C03C05H0518.2°174.3°
H04C05C06H07145.9°174.8°
H04C05C06H0694.6°65.2°
H05C05C06H0728.1°54.7°
H05C05C06H06147.6°174.7°
H07C06C07H1059.8°60.0°
H07C06C07H08179.7°180.0°
H07C06C07H0960.2°60.0°
H06C06C07H1059.8°60.0°
H06C06C07H0860.2°60.0°
H06C06C07H09179.8°180.0°
H10C07H08H09120.0°120.1°

226262

PDB entries from 2024-10-16

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