QUO

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
P	OP1	doub	1.48Å	1.49Å
P	OP2	sing	1.61Å	1.49Å
P	OP3	sing	1.61Å	1.60Å
P	O5'	sing	1.61Å	1.59Å
OP2	HOP2	sing	0.97Å	0.95Å
OP3	HOP3	sing	0.97Å	0.95Å
O5'	C5'	sing	1.43Å	1.43Å
C5'	C4'	sing	1.53Å	1.50Å
C5'	H5'	sing	1.09Å	1.12Å
C5'	H5''	sing	1.09Å	1.12Å
C4'	O4'	sing	1.44Å	1.46Å
C4'	C3'	sing	1.54Å	1.53Å
C4'	H4'	sing	1.09Å	1.12Å
O4'	C1'	sing	1.44Å	1.41Å
C1'	N9	sing	1.46Å	1.46Å
C1'	C2'	sing	1.55Å	1.52Å
C1'	H1'	sing	1.09Å	1.12Å
N9	C4	sing	1.36Å	1.39Å	Aromatic
N9	C8	sing	1.37Å	1.38Å	Aromatic
C4	N3	sing	1.34Å	1.35Å
C4	C5	doub	1.40Å	1.37Å	Aromatic
N3	C2	doub	1.31Å	1.32Å
C2	N2	sing	1.37Å	1.34Å
C2	N1	sing	1.36Å	1.38Å
N2	HN21	sing	0.97Å	1.02Å
N2	HN22	sing	0.97Å	1.02Å
N1	C6	sing	1.35Å	1.39Å
N1	H1	sing	0.97Å	1.02Å
C6	O6	doub	1.22Å	1.24Å
C6	C5	sing	1.41Å	1.42Å
C5	C7	sing	1.46Å	1.36Å	Aromatic
C7	C8	doub	1.34Å	1.31Å	Aromatic
C7	C10	sing	1.51Å	1.47Å
C8	H8	sing	1.08Å	1.10Å
C10	N11	sing	1.47Å	1.46Å
C10	H101	sing	1.09Å	1.11Å
C10	H102	sing	1.09Å	1.11Å
N11	C12	sing	1.47Å	1.48Å
N11	H11	sing	1.01Å	1.02Å
C12	C13	sing	1.54Å	1.53Å
C12	C16	sing	1.54Å	1.53Å
C12	H12	sing	1.09Å	1.11Å
C13	O13	sing	1.43Å	1.42Å
C13	C14	sing	1.54Å	1.53Å
C13	H13	sing	1.09Å	1.11Å
O13	HO13	sing	0.97Å	0.95Å
C14	O14	sing	1.43Å	1.44Å
C14	C15	sing	1.55Å	1.53Å
C14	H14	sing	1.09Å	1.12Å
O14	HO14	sing	0.97Å	0.95Å
C15	C16	sing	1.55Å	1.53Å
C15	H151	sing	1.09Å	1.11Å
C15	H152	sing	1.09Å	1.12Å
C16	H161	sing	1.09Å	1.12Å
C16	H162	sing	1.09Å	1.11Å
C2'	O2'	sing	1.43Å	1.41Å
C2'	C3'	sing	1.55Å	1.52Å
C2'	H2'	sing	1.09Å	1.11Å
O2'	HO2'	sing	0.97Å	0.95Å
C3'	O3'	sing	1.43Å	1.41Å
C3'	H3'	sing	1.09Å	1.11Å
O3'	HO3'	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
OP1	P	OP2	120.0°	109.4°
OP1	P	OP3	107.0°	109.5°
OP1	P	O5'	107.1°	109.5°
OP2	P	OP3	107.8°	109.4°
OP2	P	O5'	109.7°	109.5°
P	OP2	HOP2	120.0°	106.8°
OP3	P	O5'	104.0°	109.5°
P	OP3	HOP3	107.0°	106.8°
P	O5'	C5'	121.4°	106.8°
O5'	C5'	C4'	109.1°	109.5°
O5'	C5'	H5'	112.4°	109.5°
O5'	C5'	H5''	112.4°	109.5°
C4'	C5'	H5'	112.3°	109.5°
C4'	C5'	H5''	112.3°	109.5°
C5'	C4'	O4'	108.8°	110.4°
C5'	C4'	C3'	113.3°	110.5°
C5'	C4'	H4'	106.1°	110.4°
H5'	C5'	H5''	98.0°	109.4°
O4'	C4'	C3'	105.2°	104.8°
O4'	C4'	H4'	114.0°	110.4°
C4'	O4'	C1'	108.4°	105.3°
C3'	C4'	H4'	109.6°	110.3°
C4'	C3'	C2'	102.9°	104.1°
C4'	C3'	O3'	110.1°	110.5°
C4'	C3'	H3'	111.9°	110.5°
O4'	C1'	N9	110.6°	110.4°
O4'	C1'	C2'	103.9°	104.9°
O4'	C1'	H1'	114.3°	110.5°
N9	C1'	C2'	114.7°	110.3°
N9	C1'	H1'	103.5°	110.4°
C1'	N9	C4	124.9°	125.0°
C1'	N9	C8	128.4°	124.9°
C2'	C1'	H1'	110.2°	110.3°
C1'	C2'	O2'	110.1°	110.8°
C1'	C2'	C3'	99.7°	104.0°
C1'	C2'	H2'	116.1°	110.4°
C4	N9	C8	106.7°	110.1°
N9	C4	N3	126.4°	133.6°
N9	C4	C5	105.3°	107.3°
N9	C8	C7	110.2°	109.6°
N9	C8	H8	127.3°	125.2°
N3	C4	C5	128.2°	119.1°
C4	N3	C2	111.8°	121.2°
C4	C5	C6	120.2°	119.1°
C4	C5	C7	110.3°	106.3°
N3	C2	N2	119.5°	118.9°
N3	C2	N1	124.1°	122.1°
N2	C2	N1	116.4°	118.9°
C2	N2	HN21	119.5°	120.0°
C2	N2	HN22	108.6°	120.0°
C2	N1	C6	124.9°	120.2°
C2	N1	H1	117.0°	119.9°
HN21	N2	HN22	108.6°	120.0°
C6	N1	H1	118.1°	119.9°
N1	C6	O6	120.1°	120.8°
N1	C6	C5	110.7°	118.2°
O6	C6	C5	129.2°	120.9°
C6	C5	C7	129.5°	134.6°
C5	C7	C8	107.4°	106.7°
C5	C7	C10	119.8°	126.7°
C8	C7	C10	127.4°	126.6°
C7	C8	H8	122.5°	125.2°
C7	C10	N11	123.1°	109.5°
C7	C10	H101	107.3°	109.5°
C7	C10	H102	107.3°	109.4°
N11	C10	H101	107.4°	109.6°
N11	C10	H102	107.4°	109.4°
C10	N11	C12	132.4°	106.6°
C10	N11	H11	104.3°	106.7°
H101	C10	H102	102.4°	109.5°
C12	N11	H11	104.3°	106.7°
N11	C12	C13	113.8°	110.0°
N11	C12	C16	112.8°	110.1°
N11	C12	H12	101.8°	110.1°
C13	C12	C16	101.5°	106.6°
C13	C12	H12	113.3°	110.1°
C12	C13	O13	109.9°	110.1°
C12	C13	C14	101.1°	106.6°
C12	C13	H13	115.6°	110.0°
C16	C12	H12	114.1°	110.0°
C12	C16	C15	104.2°	104.2°
C12	C16	H161	114.2°	110.5°
C12	C16	H162	114.2°	110.5°
O13	C13	C14	112.6°	110.0°
O13	C13	H13	104.8°	110.0°
C13	O13	HO13	109.9°	106.8°
C14	C13	H13	113.0°	110.1°
C13	C14	O14	112.8°	110.6°
C13	C14	C15	103.6°	104.2°
C13	C14	H14	113.3°	110.4°
O14	C14	C15	114.9°	110.5°
O14	C14	H14	101.6°	110.4°
C14	O14	HO14	112.8°	106.8°
C15	C14	H14	111.1°	110.5°
C14	C15	C16	106.4°	102.7°
C14	C15	H151	113.4°	110.7°
C14	C15	H152	113.4°	110.8°
C16	C15	H151	113.4°	110.8°
C16	C15	H152	113.3°	110.8°
C15	C16	H161	114.2°	110.5°
C15	C16	H162	114.2°	110.5°
H151	C15	H152	97.1°	110.8°
H161	C16	H162	96.2°	110.5°
O2'	C2'	C3'	111.8°	110.5°
O2'	C2'	H2'	104.9°	110.5°
C2'	O2'	HO2'	110.0°	106.8°
C3'	C2'	H2'	114.5°	110.5°
C2'	C3'	O3'	104.9°	110.5°
C2'	C3'	H3'	116.6°	110.6°
O3'	C3'	H3'	110.0°	110.5°
C3'	O3'	HO3'	110.1°	106.7°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
OP1	P	OP2	OP3	122.8°	120.0°
OP1	P	OP2	O5'	124.6°	120.0°
OP1	P	OP3	O5'	113.2°	120.0°
OP1	P	OP2	HOP2	180.0°	60.0°
OP1	P	OP3	HOP3	180.0°	180.0°
OP1	P	O5'	C5'	143.0°	60.0°
OP2	P	OP3	O5'	116.4°	120.0°
OP2	P	OP3	HOP3	49.6°	60.0°
OP2	P	O5'	C5'	11.2°	180.0°
OP3	P	OP2	HOP2	57.2°	60.0°
OP3	P	O5'	C5'	103.9°	60.0°
O5'	P	OP2	HOP2	55.4°	180.0°
O5'	P	OP3	HOP3	66.9°	60.0°
P	O5'	C5'	C4'	174.4°	180.0°
P	O5'	C5'	H5'	60.3°	60.0°
P	O5'	C5'	H5''	49.2°	60.0°
O5'	C5'	C4'	H5'	125.3°	120.0°
O5'	C5'	C4'	H5''	125.3°	120.0°
O5'	C5'	H5'	H5''	118.3°	120.0°
O5'	C5'	C4'	O4'	66.6°	61.5°
O5'	C5'	C4'	C3'	50.0°	176.9°
O5'	C5'	C4'	H4'	170.3°	60.8°
C4'	C5'	H5'	H5''	118.2°	120.0°
C5'	C4'	O4'	C3'	121.7°	118.9°
C5'	C4'	O4'	H4'	118.2°	122.3°
C5'	C4'	C3'	H4'	118.3°	122.3°
C5'	C4'	O4'	C1'	130.4°	159.5°
C5'	C4'	C3'	C2'	99.3°	142.9°
C5'	C4'	C3'	O3'	149.2°	98.4°
C5'	C4'	C3'	H3'	26.6°	24.2°
H5'	C5'	C4'	O4'	168.1°	178.5°
H5'	C5'	C4'	C3'	75.3°	63.1°
H5'	C5'	C4'	H4'	45.0°	59.2°
H5''	C5'	C4'	O4'	58.7°	58.6°
H5''	C5'	C4'	C3'	175.4°	56.8°
H5''	C5'	C4'	H4'	64.4°	179.1°
O4'	C4'	C3'	H4'	123.0°	118.8°
C4'	O4'	C1'	N9	157.2°	159.3°
C4'	O4'	C1'	C2'	33.6°	40.5°
C4'	O4'	C1'	H1'	86.5°	78.3°
O4'	C4'	C3'	C2'	19.4°	24.1°
O4'	C4'	C3'	O3'	92.1°	142.8°
O4'	C4'	C3'	H3'	145.3°	94.7°
C3'	C4'	O4'	C1'	8.8°	40.6°
C4'	C3'	C2'	C1'	37.8°	0.1°
C4'	C3'	C2'	O2'	154.1°	118.8°
C4'	C3'	C2'	O3'	115.2°	118.6°
C4'	C3'	C2'	H3'	122.8°	118.7°
C4'	C3'	C2'	H2'	86.8°	118.6°
C4'	C3'	O3'	H3'	123.7°	122.6°
C4'	C3'	O3'	HO3'	180.0°	180.0°
H4'	C4'	O4'	C1'	111.4°	78.2°
H4'	C4'	C3'	C2'	142.4°	94.7°
H4'	C4'	C3'	O3'	31.0°	23.9°
H4'	C4'	C3'	H3'	91.7°	146.5°
O4'	C1'	N9	C2'	117.1°	115.5°
O4'	C1'	N9	H1'	122.8°	122.4°
O4'	C1'	C2'	H1'	122.9°	118.9°
O4'	C1'	N9	C4	119.3°	153.0°
O4'	C1'	N9	C8	62.9°	26.9°
O4'	C1'	C2'	O2'	161.9°	142.6°
O4'	C1'	C2'	C3'	44.4°	23.9°
O4'	C1'	C2'	H2'	79.1°	94.7°
N9	C1'	C2'	H1'	116.3°	122.2°
C1'	N9	C4	C8	178.2°	179.9°
C1'	N9	C4	N3	2.2°	0.0°
C1'	N9	C4	C5	177.1°	179.9°
C1'	N9	C8	C7	176.1°	179.9°
C1'	N9	C8	H8	3.9°	0.0°
N9	C1'	C2'	O2'	77.3°	98.5°
N9	C1'	C2'	C3'	165.2°	142.8°
N9	C1'	C2'	H2'	41.7°	24.2°
C2'	C1'	N9	C4	123.6°	91.5°
C2'	C1'	N9	C8	54.2°	88.5°
C1'	C2'	O2'	C3'	109.8°	114.7°
C1'	C2'	O2'	H2'	125.6°	122.7°
C1'	C2'	C3'	H2'	124.6°	118.5°
C1'	C2'	O2'	HO2'	179.9°	176.2°
C1'	C2'	C3'	O3'	77.4°	118.8°
C1'	C2'	C3'	H3'	160.6°	118.6°
H1'	C1'	N9	C4	3.5°	30.6°
H1'	C1'	N9	C8	174.2°	149.3°
H1'	C1'	C2'	O2'	39.0°	23.6°
H1'	C1'	C2'	C3'	78.5°	95.1°
H1'	C1'	C2'	H2'	158.0°	146.4°
N9	C4	N3	C5	179.1°	179.9°
N9	C4	N3	C2	178.7°	180.0°
N9	C4	C5	C6	179.6°	180.0°
N9	C4	C5	C7	0.1°	0.0°
C4	N9	C8	C7	2.0°	0.0°
C4	N9	C8	H8	178.0°	179.9°
C8	N9	C4	N3	179.7°	180.0°
C8	N9	C4	C5	1.1°	0.0°
N9	C8	C7	C5	2.0°	0.0°
N9	C8	C7	H8	180.0°	179.9°
N9	C8	C7	C10	151.4°	180.0°
C4	N3	C2	N2	179.2°	180.0°
C4	N3	C2	N1	0.7°	0.2°
N3	C4	C5	C6	0.4°	0.0°
N3	C4	C5	C7	179.1°	180.0°
C5	C4	N3	C2	0.4°	0.1°
C4	C5	C6	N1	0.7°	0.3°
C4	C5	C6	O6	179.0°	180.0°
C4	C5	C6	C7	179.4°	180.0°
C4	C5	C7	C8	1.3°	0.0°
C4	C5	C7	C10	154.5°	179.9°
N3	C2	N2	N1	179.9°	179.8°
N3	C2	N2	HN21	180.0°	0.1°
N3	C2	N2	HN22	54.7°	179.7°
N3	C2	N1	C6	0.3°	0.6°
N3	C2	N1	H1	179.7°	180.0°
C2	N2	HN21	HN22	125.3°	179.8°
N2	C2	N1	C6	179.6°	179.7°
N2	C2	N1	H1	0.4°	0.2°
N1	C2	N2	HN21	0.1°	179.7°
N1	C2	N2	HN22	125.4°	0.5°
C2	N1	C6	H1	180.0°	179.4°
C2	N1	C6	O6	179.3°	179.8°
C2	N1	C6	C5	0.4°	0.6°
N1	C6	O6	C5	179.7°	179.6°
N1	C6	C5	C7	178.7°	179.7°
H1	N1	C6	O6	0.7°	0.3°
H1	N1	C6	C5	179.6°	180.0°
O6	C6	C5	C7	1.6°	0.0°
C6	C5	C7	C8	179.3°	180.0°
C6	C5	C7	C10	25.0°	0.1°
C5	C7	C8	C10	153.4°	180.0°
C5	C7	C8	H8	178.0°	179.9°
C5	C7	C10	N11	82.9°	180.0°
C5	C7	C10	H101	151.9°	59.9°
C5	C7	C10	H102	42.4°	60.0°
C8	C7	C10	N11	126.7°	0.1°
C8	C7	C10	H101	1.4°	120.0°
C8	C7	C10	H102	108.1°	120.0°
C10	C7	C8	H8	28.7°	0.1°
C7	C10	N11	H101	125.2°	120.1°
C7	C10	N11	H102	125.3°	119.9°
C7	C10	H101	H102	112.9°	119.9°
C7	C10	N11	C12	178.2°	180.0°
C7	C10	N11	H11	52.9°	66.2°
N11	C10	H101	H102	112.9°	120.0°
C10	N11	C12	H11	125.3°	113.8°
C10	N11	C12	C13	56.7°	150.8°
C10	N11	C12	C16	171.7°	92.1°
C10	N11	C12	H12	65.5°	29.3°
H101	C10	N11	C12	53.0°	60.0°
H101	C10	N11	H11	72.3°	173.8°
H102	C10	N11	C12	56.5°	60.1°
H102	C10	N11	H11	178.2°	53.8°
N11	C12	C13	C16	121.5°	119.3°
N11	C12	C13	H12	115.7°	121.5°
N11	C12	C16	H12	115.7°	121.5°
N11	C12	C13	O13	167.6°	121.4°
N11	C12	C13	C14	73.3°	119.3°
N11	C12	C13	H13	49.2°	0.1°
N11	C12	C16	C15	84.7°	142.8°
N11	C12	C16	H161	40.6°	24.1°
N11	C12	C16	H162	150.0°	98.5°
H11	N11	C12	C13	178.0°	37.0°
H11	N11	C12	C16	63.0°	154.1°
H11	N11	C12	H12	59.8°	84.5°
C13	C12	C16	H12	122.2°	119.3°
C12	C13	O13	C14	111.9°	117.2°
C12	C13	O13	H13	124.9°	121.3°
C12	C13	C14	H13	124.2°	119.3°
C12	C13	O13	HO13	180.0°	178.6°
C12	C13	C14	O14	165.1°	142.4°
C12	C13	C14	C15	40.3°	23.6°
C12	C13	C14	H14	80.2°	95.1°
C13	C12	C16	C15	37.5°	23.6°
C13	C12	C16	H161	162.7°	95.1°
C13	C12	C16	H162	87.8°	142.3°
C16	C12	C13	O13	70.9°	119.3°
C16	C12	C13	C14	48.3°	0.0°
C16	C12	C13	H13	170.7°	119.4°
C12	C16	C15	C14	12.6°	38.0°
C12	C16	C15	H161	125.3°	118.7°
C12	C16	C15	H162	125.3°	118.7°
C12	C16	C15	H151	137.8°	156.3°
C12	C16	C15	H152	112.7°	80.3°
C12	C16	H161	H162	120.1°	122.6°
H12	C12	C13	O13	51.8°	0.1°
H12	C12	C13	C14	171.0°	119.2°
H12	C12	C13	H13	66.5°	121.4°
H12	C12	C16	C15	159.7°	95.7°
H12	C12	C16	H161	75.1°	145.6°
H12	C12	C16	H162	34.4°	23.0°
O13	C13	C14	H13	118.6°	121.4°
O13	C13	C14	O14	47.9°	23.0°
O13	C13	C14	C15	76.9°	95.7°
O13	C13	C14	H14	162.6°	145.6°
C14	C13	O13	HO13	68.1°	61.4°
C13	C14	O14	C15	118.4°	114.9°
C13	C14	O14	H14	121.6°	122.5°
C13	C14	C15	H14	121.9°	118.7°
C13	C14	O14	HO14	180.0°	176.3°
C13	C14	C15	C16	17.2°	38.0°
C13	C14	C15	H151	108.0°	156.3°
C13	C14	C15	H152	142.4°	80.4°
H13	C13	O13	HO13	55.2°	60.0°
H13	C13	C14	O14	70.6°	98.4°
H13	C13	C14	C15	164.5°	142.9°
H13	C13	C14	H14	44.1°	24.2°
O14	C14	C15	H14	114.6°	122.5°
O14	C14	C15	C16	140.7°	156.8°
O14	C14	C15	H151	15.5°	84.9°
O14	C14	C15	H152	94.1°	38.4°
C15	C14	O14	HO14	61.6°	61.5°
C14	C15	C16	H151	125.3°	118.3°
C14	C15	C16	H152	125.2°	118.3°
C14	C15	H151	H152	119.3°	123.3°
C14	C15	C16	H161	137.8°	80.7°
C14	C15	C16	H162	112.7°	156.6°
H14	C14	O14	HO14	58.4°	61.1°
H14	C14	C15	C16	104.7°	80.7°
H14	C14	C15	H151	130.0°	37.6°
H14	C14	C15	H152	20.5°	161.0°
C16	C15	H151	H152	119.3°	123.4°
C15	C16	H161	H162	120.1°	122.6°
H151	C15	C16	H161	96.9°	37.6°
H151	C15	C16	H162	12.6°	85.1°
H152	C15	C16	H161	12.6°	161.0°
H152	C15	C16	H162	122.1°	38.3°
O2'	C2'	C3'	H2'	119.1°	122.6°
O2'	C2'	C3'	O3'	38.9°	0.1°
O2'	C2'	C3'	H3'	83.1°	122.5°
C3'	C2'	O2'	HO2'	70.1°	61.5°
C2'	C3'	O3'	H3'	126.1°	122.7°
C2'	C3'	O3'	HO3'	69.9°	65.3°
H2'	C2'	O2'	HO2'	54.5°	61.1°
H2'	C2'	C3'	O3'	158.0°	122.7°
H2'	C2'	C3'	H3'	36.0°	0.1°
H3'	C3'	O3'	HO3'	56.2°	57.4°

Definition date:	1999-07-20
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1C0A