Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

QOL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3C4doub1.39Å1.39ÅAromatic
C3C2sing1.38Å1.41ÅAromatic
C4C5sing1.36Å1.40ÅAromatic
C2Nsing1.39Å1.35Å
C2C7doub1.41Å1.40ÅAromatic
C5C6doub1.40Å1.40ÅAromatic
OZ2CE2sing1.43Å1.43Å
C7C6sing1.42Å1.40ÅAromatic
C7N11sing1.33Å1.35ÅAromatic
C6C8sing1.41Å1.40ÅAromatic
N11C10doub1.32Å1.34ÅAromatic
C8OBsing1.36Å1.38Å
C8C9doub1.38Å1.40ÅAromatic
OBCGsing1.43Å1.46Å
C10C9sing1.40Å1.38ÅAromatic
C10Csing1.48Å1.40Å
CE2CDsing1.53Å1.53Å
CDCGsing1.53Å1.54Å
CDCE1sing1.53Å1.55Å
COdoub1.21Å1.23Å
CE1OZ1sing1.43Å1.45Å
OZ1H1sing0.97Å0.95Å
CE1H2sing1.09Å1.10Å
CE1H3sing1.09Å1.10Å
CDH4sing1.09Å1.10Å
CE2H5sing1.09Å1.10Å
CE2H6sing1.09Å1.10Å
OZ2H7sing0.97Å0.95Å
CGH8sing1.09Å1.10Å
CGH9sing1.09Å1.10Å
C9H10sing1.08Å1.08Å
CH11sing1.08Å1.08Å
C5H12sing1.08Å1.08Å
C4H13sing1.08Å1.08Å
C3H14sing1.08Å1.08Å
NH15sing0.97Å1.00Å
NH16sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4C3C2119.5°120.8°
C3C4C5120.4°121.0°
C3C4H13119.8°119.5°
C4C3H14120.3°119.6°
C3C2N129.3°120.2°
C3C2C7119.5°119.5°
C2C3H14120.2°119.6°
C4C5C6120.9°120.0°
C4C5H12119.6°120.1°
C5C4H13119.8°119.5°
NC2C7111.2°120.3°
C2NH15109.5°120.0°
C2NH16109.4°120.0°
C2C7C6121.6°119.0°
C2C7N11118.6°120.9°
C5C6C7118.2°119.8°
C5C6C8123.3°121.2°
C6C5H12119.5°120.0°
OZ2CE2CD107.7°109.5°
OZ2CE2H5109.9°109.5°
OZ2CE2H6109.9°109.5°
CE2OZ2H7109.5°114.0°
C6C7N11119.9°120.2°
C7C6C8118.5°119.1°
C7N11C10124.1°121.7°
C6C8OB118.3°121.0°
C6C8C9118.4°118.1°
N11C10C9117.3°121.5°
N11C10C122.8°119.3°
OBC8C9123.3°120.9°
C8OBCG114.9°117.0°
C8C9C10121.8°119.6°
C8C9H10119.1°120.3°
OBCGCD114.7°109.5°
OBCGH8108.2°109.5°
OBCGH9108.1°109.5°
C9C10C119.9°119.2°
C10C9H10119.1°120.2°
C10CO122.5°120.0°
C10CH11118.8°120.1°
CE2CDCG110.4°109.5°
CE2CDCE1111.7°109.5°
CE2CDH4108.6°109.5°
CDCE2H5109.9°109.4°
CDCE2H6109.9°109.4°
CGCDCE1109.3°109.5°
CGCDH4108.4°109.5°
CDCGH8108.1°109.4°
CDCGH9108.2°109.5°
CDCE1OZ1111.9°109.4°
CDCE1H2108.9°109.5°
CDCE1H3108.8°109.5°
CE1CDH4108.3°109.5°
OCH11118.7°120.0°
CE1OZ1H1109.5°114.0°
OZ1CE1H2108.9°109.5°
OZ1CE1H3108.9°109.5°
H2CE1H3109.5°109.6°
H5CE2H6109.5°109.5°
H8CGH9109.5°109.5°
H15NH16109.5°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4C3C2H14180.0°179.5°
C3C4C5H13180.0°180.0°
C4C3C2N179.4°180.0°
C4C3C2C70.8°0.9°
C3C4C5C60.5°0.1°
C3C4C5H12179.5°179.9°
C2C3C4C50.1°0.5°
C3C2NC7178.6°179.1°
C3C2C7C60.9°0.9°
C3C2C7N11179.2°179.6°
C2C3C4H13179.9°179.5°
C3C2NH15180.0°0.0°
C3C2NH1660.0°180.0°
C4C5C6H12180.0°179.9°
C4C5C6C70.4°0.1°
C4C5C6C8179.9°179.6°
C5C4C3H14179.9°180.0°
NC2C7C6179.7°180.0°
NC2C7N110.4°0.5°
NC2C3H140.6°0.5°
C2NH15H16120.0°180.0°
C2C7C6C50.3°0.5°
C2C7C6N11179.8°179.5°
C2C7C6C8179.2°180.0°
C2C7N11C10178.8°179.8°
C7C2C3H14179.1°179.6°
C7C2NH151.4°179.2°
C7C2NH16118.6°0.8°
C5C6C7C8179.5°179.5°
C5C6C7N11179.8°180.0°
C5C6C8OB0.2°0.3°
C5C6C8C9179.9°180.0°
C6C5C4H13179.5°179.9°
OZ2CE2CDH5119.7°120.0°
OZ2CE2CDH6119.7°120.0°
OZ2CE2CDCG77.2°65.0°
OZ2CE2CDCE1161.0°175.0°
OZ2CE2CDH441.6°55.0°
OZ2CE2H5H6120.8°120.1°
C6C7N11C101.1°0.3°
C7C6C8OB179.6°179.8°
C7C6C8C90.5°0.5°
C7C6C5H12179.6°179.9°
N11C7C6C80.7°0.5°
C7N11C10C91.2°0.0°
C7N11C10C178.8°180.0°
C6C8OBC9179.9°179.7°
C6C8OBCG174.4°179.7°
C6C8C9C100.6°0.3°
C6C8C9H10179.4°179.7°
C8C6C5H120.1°0.6°
N11C10C9C81.0°0.0°
N11C10C9C180.0°179.9°
N11C10CO168.8°0.0°
N11C10C9H10179.0°179.9°
N11C10CH1111.2°179.9°
OBC8C9C10179.5°180.0°
C8OBCGCD176.0°180.0°
C8OBCGH855.3°60.0°
C8OBCGH963.2°60.0°
OBC8C9H100.5°0.0°
C9C8OBCG5.7°0.0°
C8C9C10H10180.0°180.0°
C8C9C10C179.0°180.0°
OBCGCDCE225.6°65.0°
OBCGCDH8120.8°120.0°
OBCGCDH9120.8°120.0°
OBCGCDCE1148.8°175.0°
OBCGCDH493.3°55.0°
OBCGH8H9117.6°120.0°
C9C10CO11.2°180.0°
C9C10CH11168.8°0.0°
C10COH11180.0°180.0°
CC10C9H100.9°0.0°
CE2CDCGCE1123.2°120.0°
CE2CDCGH4118.8°120.0°
CE2CDCE1H4119.5°120.0°
CE2CDCE1OZ147.5°65.0°
CE2CDCE1H272.8°55.0°
CE2CDCE1H3167.9°175.0°
CDCE2H5H6120.8°119.9°
CDCE2OZ2H7180.0°180.0°
CE2CDCGH8146.3°55.0°
CE2CDCGH995.2°175.0°
CGCDCE1H4118.0°120.0°
CGCDCE1OZ175.0°175.0°
CGCDCE1H2164.7°65.1°
CGCDCE1H345.4°55.0°
CGCDCE2H542.6°175.0°
CGCDCE2H6163.1°55.1°
CDCGH8H9117.6°120.0°
CDCE1OZ1H2120.4°119.9°
CDCE1OZ1H3120.4°120.0°
CDCE1OZ1H1180.0°180.0°
CDCE1H2H3118.9°120.0°
CE1CDCE2H579.3°55.0°
CE1CDCE2H641.3°64.9°
CE1CDCGH890.4°65.0°
CE1CDCGH928.1°55.0°
OZ1CE1H2H3118.9°120.0°
OZ1CE1CDH4167.1°55.0°
H1OZ1CE1H259.6°60.1°
H1OZ1CE1H359.7°60.0°
H2CE1CDH446.7°175.0°
H3CE1CDH472.6°64.9°
H4CDCE2H5161.3°65.0°
H4CDCE2H678.1°175.1°
H4CDCGH827.5°175.0°
H4CDCGH9146.0°65.0°
H5CE2OZ2H760.3°60.0°
H6CE2OZ2H760.3°60.0°
H12C5C4H130.5°0.1°
H13C4C3H140.1°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon