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Summary Geometry Related PDB entries

QFP

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C11	O12	sing	1.43Å	1.39Å
C11	C10	sing	1.53Å	1.57Å
O7	B3	sing	1.42Å	1.48Å
C10	O6	sing	1.43Å	1.43Å
B3	O6	sing	1.42Å	1.47Å
B3	C1	sing	1.57Å	1.57Å
C2	C1	doub	1.39Å	1.43Å	Aromatic
C2	C5	sing	1.38Å	1.44Å	Aromatic
C1	C4	sing	1.39Å	1.44Å	Aromatic
C5	C9	doub	1.38Å	1.44Å	Aromatic
C4	C8	doub	1.38Å	1.45Å	Aromatic
C9	C8	sing	1.38Å	1.43Å	Aromatic
C4	H1	sing	1.08Å	1.08Å
C5	H2	sing	1.08Å	1.08Å
C8	H3	sing	1.08Å	1.08Å
C10	H4	sing	1.09Å	1.10Å
C10	H5	sing	1.09Å	1.10Å
C9	H6	sing	1.08Å	1.08Å
C2	H7	sing	1.08Å	1.08Å
O7	H8	sing	0.97Å	0.95Å
C11	H9	sing	1.09Å	1.10Å
C11	H10	sing	1.09Å	1.10Å
O12	H11	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O12	C11	C10	103.5°	109.5°
O12	C11	H9	110.9°	109.5°
O12	C11	H10	111.0°	109.4°
C11	O12	H11	109.5°	114.1°
C11	C10	O6	112.8°	109.5°
C11	C10	H4	108.6°	109.4°
C11	C10	H5	108.6°	109.4°
C10	C11	H9	110.9°	109.5°
C10	C11	H10	110.9°	109.5°
O7	B3	O6	108.9°	120.0°
O7	B3	C1	115.3°	120.0°
B3	O7	H8	109.5°	114.0°
C10	O6	B3	120.9°	114.0°
O6	C10	H4	108.6°	109.5°
O6	C10	H5	108.6°	109.5°
O6	B3	C1	114.1°	120.0°
B3	C1	C2	123.4°	120.1°
B3	C1	C4	118.5°	120.1°
C1	C2	C5	123.6°	119.9°
C2	C1	C4	117.8°	119.8°
C1	C2	H7	118.2°	120.1°
C2	C5	C9	117.9°	120.2°
C2	C5	H2	121.1°	119.9°
C5	C2	H7	118.2°	120.1°
C1	C4	C8	119.8°	119.9°
C1	C4	H1	120.1°	120.0°
C5	C9	C8	119.9°	120.2°
C9	C5	H2	121.1°	119.9°
C5	C9	H6	120.1°	119.9°
C4	C8	C9	121.0°	120.1°
C8	C4	H1	120.1°	120.1°
C4	C8	H3	119.5°	119.9°
C9	C8	H3	119.5°	119.9°
C8	C9	H6	120.1°	119.9°
H4	C10	H5	109.5°	109.5°
H9	C11	H10	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O12	C11	C10	H9	119.0°	120.0°
O12	C11	C10	H10	119.1°	119.9°
O12	C11	C10	O6	68.2°	65.0°
O12	C11	C10	H4	171.3°	55.0°
O12	C11	C10	H5	52.3°	175.0°
O12	C11	H9	H10	122.8°	119.9°
C11	C10	O6	H4	120.5°	120.0°
C11	C10	O6	H5	120.5°	120.0°
C11	C10	O6	B3	107.4°	180.0°
C11	C10	H4	H5	118.5°	119.9°
C10	C11	H9	H10	122.7°	120.1°
C10	C11	O12	H11	180.0°	180.0°
O7	B3	O6	C10	41.2°	0.0°
O7	B3	O6	C1	130.4°	180.0°
O7	B3	C1	C2	32.4°	0.0°
O7	B3	C1	C4	154.1°	179.5°
C10	O6	B3	C1	89.2°	180.0°
O6	C10	H4	H5	118.5°	120.1°
O6	C10	C11	H9	50.8°	175.0°
O6	C10	C11	H10	172.7°	55.0°
O6	B3	C1	C2	159.5°	180.0°
O6	B3	C1	C4	27.0°	0.6°
B3	O6	C10	H4	13.1°	60.0°
B3	O6	C10	H5	132.1°	60.0°
O6	B3	O7	H8	180.0°	180.0°
B3	C1	C2	C4	173.5°	179.5°
B3	C1	C2	C5	176.4°	180.0°
B3	C1	C4	C8	175.7°	179.4°
B3	C1	C4	H1	4.3°	0.3°
B3	C1	C2	H7	3.5°	0.6°
C1	B3	O7	H8	50.4°	0.1°
C1	C2	C5	H7	180.0°	179.4°
C1	C2	C5	C9	2.2°	0.9°
C2	C1	C4	C8	1.9°	0.1°
C2	C1	C4	H1	178.1°	179.7°
C1	C2	C5	H2	177.8°	179.8°
C5	C2	C1	C4	3.0°	0.5°
C2	C5	C9	H2	180.0°	179.4°
C2	C5	C9	C8	0.4°	0.6°
C2	C5	C9	H6	179.6°	179.4°
C1	C4	C8	H1	180.0°	179.6°
C1	C4	C8	C9	0.2°	0.4°
C1	C4	C8	H3	179.8°	179.7°
C4	C1	C2	H7	177.0°	180.0°
C5	C9	C8	C4	0.5°	0.0°
C5	C9	C8	H6	180.0°	180.0°
C5	C9	C8	H3	179.5°	179.9°
C9	C5	C2	H7	177.7°	179.7°
C4	C8	C9	H3	180.0°	179.9°
C4	C8	C9	H6	179.5°	180.0°
C9	C8	C4	H1	179.7°	180.0°
C8	C9	C5	H2	179.6°	180.0°
H1	C4	C8	H3	0.3°	0.1°
H2	C5	C9	H6	0.4°	0.0°
H2	C5	C2	H7	2.3°	0.3°
H3	C8	C9	H6	0.5°	0.1°
H4	C10	C11	H9	69.6°	65.0°
H4	C10	C11	H10	52.3°	174.9°
H5	C10	C11	H9	171.3°	55.0°
H5	C10	C11	H10	66.8°	65.1°
H9	C11	O12	H11	60.9°	59.9°
H10	C11	O12	H11	61.0°	60.0°

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PDB entries from 2024-10-09

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