Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

QDE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1Sdoub1.42Å1.43Å
SC6sing1.81Å1.75Å
SN1sing1.66Å1.62Å
SO2doub1.42Å1.43Å
N1C5sing1.40Å1.42Å
C14N3sing1.47Å1.46Å
OCsing1.43Å1.43Å
OC1sing1.36Å1.35Å
C5C1doub1.40Å1.41ÅAromatic
C5C4sing1.39Å1.39ÅAromatic
C15N3sing1.47Å1.47Å
C1Nsing1.32Å1.33ÅAromatic
N3C13sing1.47Å1.47Å
C4C3doub1.39Å1.39ÅAromatic
C13C12sing1.51Å1.51Å
NC2doub1.32Å1.35ÅAromatic
C3C2sing1.39Å1.39ÅAromatic
C3N2sing1.40Å1.44Å
C12C16doub1.38Å1.39ÅAromatic
C12C11sing1.38Å1.40ÅAromatic
C16C17sing1.39Å1.39ÅAromatic
C11C10doub1.38Å1.39ÅAromatic
C17N2sing1.40Å1.42Å
C17C9doub1.39Å1.41ÅAromatic
N2C7sing1.47Å1.48Å
C10C9sing1.39Å1.39ÅAromatic
C9O3sing1.36Å1.37Å
C7C8sing1.54Å1.50Å
O3C8sing1.43Å1.43Å
N1H1sing0.97Å1.00Å
C4H3sing1.08Å1.08Å
C6H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C8H10sing1.09Å1.10Å
C10H11sing1.08Å1.08Å
C13H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C15H14sing1.09Å1.10Å
C15H15sing1.09Å1.10Å
C15H16sing1.09Å1.10Å
CH17sing1.09Å1.10Å
CH18sing1.09Å1.10Å
CH19sing1.09Å1.10Å
C2H20sing1.08Å1.08Å
C16H21sing1.08Å1.08Å
C11H22sing1.08Å1.08Å
C14H23sing1.09Å1.10Å
C14H24sing1.09Å1.10Å
C14H25sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1SC6108.6°110.6°
O1SN1106.5°104.3°
O1SO2118.9°121.0°
C6SN1106.5°104.4°
C6SO2108.5°110.6°
SC6H4109.5°109.5°
SC6H5109.4°109.4°
SC6H6109.5°109.5°
N1SO2107.2°104.3°
SN1C5126.0°120.0°
SN1H1105.2°120.0°
N1C5C1119.9°120.5°
N1C5C4122.0°120.5°
C5N1H1105.2°120.0°
C14N3C15109.4°111.0°
C14N3C13112.4°111.0°
N3C14H23109.5°109.5°
N3C14H24109.5°109.5°
N3C14H25109.5°109.4°
COC1117.7°117.0°
OCH17109.5°109.5°
OCH18109.4°109.5°
OCH19109.5°109.5°
OC1C5114.7°119.7°
OC1N121.9°119.7°
C1C5C4118.1°119.1°
C5C1N123.4°120.7°
C5C4C3119.3°118.4°
C5C4H3120.4°120.8°
C15N3C13110.5°111.1°
N3C15H14109.5°109.4°
N3C15H15109.5°109.5°
N3C15H16109.4°109.5°
C1NC2117.6°121.8°
N3C13C12114.1°109.5°
N3C13H12108.3°109.4°
N3C13H13108.3°109.4°
C4C3C2117.9°119.2°
C4C3N2120.5°120.4°
C3C4H3120.4°120.8°
C13C12C16119.3°120.0°
C13C12C11121.6°120.0°
C12C13H12108.3°109.5°
C12C13H13108.3°109.5°
NC2C3123.7°120.9°
NC2H20118.2°119.5°
C2C3N2121.6°120.4°
C3C2H20118.1°119.6°
C3N2C17122.7°121.1°
C3N2C7113.9°121.2°
C16C12C11118.8°120.1°
C12C16C17121.3°119.8°
C12C16H21119.4°120.1°
C12C11C10121.1°120.3°
C12C11H22119.5°119.8°
C16C17N2122.1°120.1°
C16C17C9118.8°120.2°
C17C16H21119.3°120.1°
C11C10C9119.3°120.1°
C11C10H11120.4°120.0°
C10C11H22119.4°119.9°
N2C17C9119.1°119.7°
C17N2C7117.6°117.7°
C17C9C10120.6°119.5°
C17C9O3122.3°120.8°
N2C7C8109.4°107.6°
N2C7H7109.5°109.8°
N2C7H8109.5°109.9°
C10C9O3117.0°119.7°
C9C10H11120.3°120.0°
C9O3C8113.8°117.8°
C7C8O3110.7°108.8°
C8C7H7109.5°109.8°
C8C7H8109.5°109.8°
C7C8H9109.2°109.6°
C7C8H10109.2°109.6°
O3C8H9109.1°109.6°
O3C8H10109.1°109.8°
H4C6H5109.5°109.5°
H4C6H6109.5°109.5°
H5C6H6109.5°109.5°
H7C7H8109.5°109.8°
H9C8H10109.5°109.6°
H12C13H13109.5°109.4°
H14C15H15109.4°109.5°
H14C15H16109.5°109.5°
H15C15H16109.5°109.5°
H17CH18109.5°109.4°
H17CH19109.5°109.4°
H18CH19109.5°109.4°
H23C14H24109.5°109.4°
H23C14H25109.5°109.5°
H24C14H25109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1SC6N1114.3°111.6°
O1SC6O2130.6°136.8°
O1SN1O2128.3°127.8°
O1SN1C5178.3°51.1°
O1SN1H156.1°129.2°
O1SC6H4180.0°171.6°
O1SC6H560.0°68.4°
O1SC6H660.0°51.6°
C6SN1O2116.0°116.1°
C6SN1C562.6°65.0°
C6SN1H159.6°114.7°
SC6H4H5120.0°120.0°
SC6H4H6120.0°120.0°
SC6H5H6120.0°120.0°
SN1C5H1122.2°179.7°
SN1C5C1136.4°144.7°
SN1C5C443.3°35.2°
N1SC6H465.8°60.0°
N1SC6H5174.3°180.0°
N1SC6H654.3°60.0°
O2SN1C553.4°178.9°
O2SN1H1175.6°1.4°
O2SC6H449.4°51.6°
O2SC6H570.6°68.4°
O2SC6H6169.4°171.6°
N1C5C1O0.5°0.0°
N1C5C1C4179.7°180.0°
N1C5C1N179.8°180.0°
N1C5C4C3178.5°180.0°
N1C5C4H31.5°0.2°
C14N3C15C13124.2°124.0°
C14N3C13C1242.9°66.0°
C14N3C13H1277.8°54.0°
C14N3C13H13163.6°173.9°
C14N3C15H14180.0°64.0°
C14N3C15H1560.0°56.0°
C14N3C15H1660.0°176.0°
N3C14H23H24120.0°120.0°
N3C14H23H25120.0°120.0°
N3C14H24H25120.0°120.0°
COC1C5175.2°180.0°
COC1N5.2°0.0°
OCH17H18120.0°120.0°
OCH17H19120.0°120.0°
OCH18H19120.0°120.1°
OC1C5N179.6°180.0°
OC1C5C4179.1°180.0°
OC1NC2178.3°179.7°
C1OCH17180.0°60.0°
C1OCH1860.0°60.0°
C1OCH1960.0°180.0°
C1C5C4C31.1°0.1°
C5C1NC21.3°0.3°
C1C5N1H1101.4°35.0°
C1C5C4H3178.9°179.7°
C4C5C1N0.5°0.0°
C5C4C3H3180.0°179.8°
C5C4C3C21.9°0.2°
C5C4C3N2177.6°179.7°
C4C5N1H178.9°145.0°
C15N3C13C12165.4°170.0°
C15N3C13H1244.7°70.0°
C15N3C13H1373.9°49.9°
N3C15H14H15120.0°120.0°
N3C15H14H16120.0°120.0°
N3C15H15H16120.0°120.0°
C15N3C14H23180.0°176.0°
C15N3C14H2460.0°56.0°
C15N3C14H2560.0°64.0°
C1NC2C30.5°0.6°
C1NC2H20179.5°180.0°
N3C13C12H12120.7°120.0°
N3C13C12H13120.7°120.0°
N3C13C12C16123.9°90.0°
N3C13C12C1162.3°90.1°
N3C13H12H13117.9°119.9°
C13N3C15H1455.8°60.0°
C13N3C15H1564.2°180.0°
C13N3C15H16175.8°59.9°
C13N3C14H2356.9°60.0°
C13N3C14H24176.9°179.9°
C13N3C14H2563.1°60.1°
C4C3C2N1.1°0.5°
C4C3C2N2179.5°179.9°
C4C3N2C1732.6°112.7°
C4C3N2C7119.7°67.3°
C4C3C2H20178.9°179.9°
C13C12C16C11173.9°180.0°
C13C12C16C17173.5°180.0°
C13C12C11C10171.8°179.9°
C12C13H12H13117.8°120.0°
C13C12C16H216.5°0.0°
C13C12C11H228.2°0.1°
NC2C3H20180.0°179.4°
NC2C3N2178.4°179.4°
C2C3N2C17146.9°67.4°
C2C3N2C760.8°112.6°
C2C3C4H3178.1°180.0°
C3N2C17C1625.9°13.8°
C3N2C17C7151.4°180.0°
C3N2C17C9156.0°166.1°
C3N2C7C8171.9°138.0°
N2C3C4H32.4°0.1°
C3N2C7H768.1°102.5°
C3N2C7H852.0°18.4°
N2C3C2H201.6°0.0°
C12C16C17H21180.0°180.0°
C16C12C11C102.0°0.1°
C12C16C17N2179.7°179.8°
C12C16C17C91.6°0.1°
C16C12C13H123.3°30.0°
C16C12C13H13115.3°150.0°
C16C12C11H22178.0°179.9°
C11C12C16C170.4°0.0°
C12C11C10H22180.0°179.9°
C12C11C10C91.5°0.0°
C12C11C10H11178.5°179.9°
C11C12C13H12177.0°149.9°
C11C12C13H1358.4°30.0°
C11C12C16H21179.6°180.0°
C16C17N2C9178.1°180.0°
C16C17N2C7177.2°166.1°
C16C17C9C102.1°0.2°
C16C17C9O3175.4°179.5°
C11C10C9C170.6°0.1°
C11C10C9H11180.0°179.9°
C11C10C9O3177.1°179.6°
N2C17C9C10179.7°179.8°
N2C17C9O32.8°0.5°
C17N2C7C834.3°42.0°
C17N2C7H785.7°77.5°
C17N2C7H8154.2°161.6°
N2C17C16H210.3°0.2°
C9C17N2C74.7°13.9°
C17C9C10O3177.6°179.7°
C17C9O3C822.3°20.3°
C17C9C10H11179.4°179.8°
C9C17C16H21178.4°179.8°
N2C7C8H7120.0°119.5°
N2C7C8H8120.0°119.6°
N2C7C8O358.4°58.1°
N2C7H7H8120.1°121.0°
N2C7C8H9178.6°61.6°
N2C7C8H1061.8°178.1°
C10C9O3C8155.3°160.0°
C9C10C11H22178.5°179.9°
C9O3C8C753.0°49.4°
C9O3C8H9173.2°70.3°
C9O3C8H1067.2°169.3°
O3C9C10H113.0°0.5°
C7C8O3H9120.2°119.7°
C7C8O3H10120.2°119.9°
C8C7H7H8120.0°120.9°
C7C8H9H10119.4°120.3°
O3C8C7H761.6°61.4°
O3C8C7H8178.4°177.8°
O3C8H9H10119.4°120.5°
H4C6H5H6120.0°120.0°
H7C7C8H958.6°178.9°
H7C7C8H10178.2°58.6°
H8C7C8H961.4°58.0°
H8C7C8H1058.2°62.3°
H11C10C11H221.5°0.0°
H14C15H15H16120.0°120.0°
H17CH18H19120.0°119.9°
H23C14H24H25120.0°120.0°

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon