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SummaryGeometryRelated PDB entries

QD7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
NAACABsing1.47Å1.46Å
CACCABsing1.53Å1.51Å
CACCADsing1.53Å1.51Å
OAHPAEdoub1.48Å1.48Å
CAGPAEsing1.82Å1.79Å
PAECADsing1.82Å1.74Å
PAEOAFsing1.61Å1.61Å
CABH1sing1.09Å1.10Å
CABH2sing1.09Å1.10Å
CACH3sing1.09Å1.10Å
CACH4sing1.09Å1.10Å
CADH5sing1.09Å1.10Å
CADH6sing1.09Å1.10Å
CAGH7sing1.09Å1.10Å
CAGH8sing1.09Å1.10Å
CAGH9sing1.09Å1.10Å
NAAH10sing1.01Å1.00Å
NAAH11sing1.01Å1.00Å
OAFH13sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NAACABCAC108.0°109.5°
NAACABH1109.9°109.5°
NAACABH2109.9°109.5°
CABNAAH10109.5°111.0°
CABNAAH11109.5°111.0°
CABCACCAD109.7°109.4°
CACCABH1109.8°109.5°
CACCABH2109.8°109.5°
CABCACH3109.4°109.4°
CABCACH4109.4°109.5°
CACCADPAE105.4°109.5°
CADCACH3109.4°109.5°
CADCACH4109.4°109.5°
CACCADH5110.5°109.4°
CACCADH6110.5°109.5°
OAHPAECAG114.0°109.5°
OAHPAECAD113.1°109.5°
OAHPAEOAF111.7°109.5°
CAGPAECAD106.4°109.5°
CAGPAEOAF102.0°109.5°
PAECAGH7109.5°109.5°
PAECAGH8109.5°109.4°
PAECAGH9109.5°109.4°
CADPAEOAF108.8°109.5°
PAECADH5110.5°109.5°
PAECADH6110.5°109.5°
PAEOAFH13109.5°114.1°
H1CABH2109.5°109.5°
H3CACH4109.5°109.5°
H5CADH6109.5°109.5°
H7CAGH8109.4°109.5°
H7CAGH9109.4°109.5°
H8CAGH9109.5°109.5°
H10NAAH11109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NAACABCACH1119.8°120.0°
NAACABCACH2119.8°120.0°
NAACABCACCAD178.8°180.0°
NAACABH1H2120.7°120.0°
NAACABCACH361.2°60.0°
NAACABCACH458.8°60.0°
CABNAAH10H11120.0°124.0°
CABCACCADH3120.0°119.9°
CABCACCADH4120.0°120.0°
CABCACCADPAE179.3°180.0°
CACCABH1H2120.7°120.0°
CABCACH3H4119.9°120.0°
CABCACCADH561.4°60.0°
CABCACCADH659.9°60.0°
CACCABNAAH10180.0°56.0°
CACCABNAAH1160.0°180.0°
CACCADPAEOAH44.7°54.9°
CACCADPAECAG81.3°174.9°
CACCADPAEH5119.3°120.0°
CACCADPAEH6119.4°120.0°
CACCADPAEOAF169.4°65.0°
CADCACCABH159.0°59.9°
CADCACCABH261.4°60.1°
CADCACH3H4119.9°120.1°
CACCADH5H6121.9°120.0°
OAHPAECAGCAD125.4°120.0°
OAHPAECAGOAF120.6°120.0°
OAHPAECADOAF124.8°120.0°
OAHPAECADH5164.0°65.0°
OAHPAECADH674.7°175.0°
OAHPAECAGH7180.0°60.0°
OAHPAECAGH860.0°180.0°
OAHPAECAGH960.0°60.0°
OAHPAEOAFH130.0°60.0°
CAGPAECADOAF109.3°120.0°
CAGPAECADH538.0°55.0°
CAGPAECADH6159.3°65.0°
PAECAGH7H8120.0°120.0°
PAECAGH7H9120.0°120.0°
PAECAGH8H9120.0°119.9°
CAGPAEOAFH13122.2°60.0°
PAECADCACH359.2°60.1°
PAECADCACH460.7°60.0°
PAECADH5H6121.9°120.0°
CADPAECAGH754.6°60.0°
CADPAECAGH8174.6°60.0°
CADPAECAGH965.4°180.0°
CADPAEOAFH13125.6°180.0°
OAFPAECADH571.2°175.0°
OAFPAECADH650.1°55.0°
OAFPAECAGH759.3°180.0°
OAFPAECAGH860.6°60.0°
OAFPAECAGH9179.3°59.9°
H1CABCACH3179.0°60.0°
H1CABCACH461.0°NaN°
H1CABNAAH1060.2°64.0°
H1CABNAAH1159.7°60.0°
H2CABCACH358.6°180.0°
H2CABCACH4178.5°60.0°
H2CABNAAH1060.3°176.0°
H2CABNAAH11179.8°60.0°
H3CACCADH5178.6°179.9°
H3CACCADH660.1°60.0°
H4CACCADH558.6°60.0°
H4CACCADH6179.9°180.0°
H7CAGH8H9120.0°120.1°

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PDB entries from 2024-07-17

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