Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

QD1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C04N05doub1.31Å1.40ÅAromatic
C04C03sing1.39Å1.43ÅAromatic
N05C06sing1.34Å1.41ÅAromatic
C03C02doub1.39Å1.39ÅAromatic
C06C07sing1.41Å1.46ÅAromatic
C06C12doub1.41Å1.38ÅAromatic
C07C08doub1.36Å1.43ÅAromatic
C02C12sing1.42Å1.46ÅAromatic
C02N01sing1.39Å1.44Å
C12C11sing1.40Å1.44ÅAromatic
C08C09sing1.39Å1.41ÅAromatic
C11C09doub1.36Å1.42ÅAromatic
C09CL10sing1.74Å1.80Å
C03H031sing1.08Å1.08Å
C04H041sing1.08Å1.08Å
C07H071sing1.08Å1.08Å
C08H081sing1.08Å1.08Å
C11H111sing1.08Å1.08Å
N01H012sing0.97Å1.00Å
N01H011sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N05C04C03120.8°121.9°
C04N05C06117.5°121.7°
N05C04H041119.6°119.1°
C04C03C02120.8°119.7°
C04C03H031119.6°120.2°
C03C04H041119.6°119.1°
N05C06C07114.8°121.0°
N05C06C12123.9°119.9°
C03C02C12118.7°117.9°
C03C02N01118.0°121.1°
C02C03H031119.6°120.1°
C07C06C12121.3°119.1°
C06C07C08118.5°119.8°
C06C07H071120.8°120.1°
C06C12C02118.2°118.9°
C06C12C11120.8°119.7°
C07C08C09119.2°121.0°
C08C07H071120.8°120.1°
C07C08H081120.4°119.5°
C12C02N01123.3°121.0°
C02C12C11121.0°121.4°
C02N01H012109.5°120.0°
C02N01H011109.5°120.0°
C12C11C09118.0°119.6°
C12C11H111121.0°120.2°
C08C09C11122.3°120.8°
C08C09CL10120.1°119.6°
C09C08H081120.4°119.5°
C11C09CL10117.6°119.6°
C09C11H111121.0°120.2°
H012N01H011109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N05C04C03H041180.0°180.0°
N05C04C03C020.1°0.0°
C04N05C06C07179.9°180.0°
C04N05C06C120.2°0.5°
N05C04C03H031179.9°179.9°
C03C04N05C060.0°0.3°
C04C03C02H031180.0°179.9°
C04C03C02C120.0°0.0°
C04C03C02N01179.5°179.7°
N05C06C07C12179.9°179.5°
N05C06C07C08179.8°179.5°
N05C06C12C020.2°0.5°
N05C06C12C11179.9°179.5°
C06N05C04H041180.0°179.7°
N05C06C07H0710.2°0.6°
C03C02C12C060.1°0.2°
C03C02C12N01179.5°179.7°
C03C02C12C11179.9°179.7°
C02C03C04H041179.9°180.0°
C03C02N01H012180.0°179.7°
C03C02N01H01160.0°0.3°
C06C07C08H071180.0°180.0°
C07C06C12C02179.9°180.0°
C07C06C12C110.0°0.0°
C06C07C08C090.1°0.0°
C06C07C08H081179.9°180.0°
C12C06C07C080.1°0.1°
C06C12C02C11179.8°180.0°
C06C12C02N01179.7°179.9°
C06C12C11C090.2°0.0°
C12C06C07H071179.9°179.9°
C06C12C11H111179.8°180.0°
C07C08C09H081180.0°180.0°
C07C08C09C110.1°0.0°
C07C08C09CL10179.9°180.0°
C02C12C11C09180.0°179.9°
C12C02C03H031179.9°179.9°
C02C12C11H1110.1°0.0°
C12C02N01H0120.5°0.0°
C12C02N01H011119.5°180.0°
N01C02C12C110.5°0.0°
N01C02C03H0310.5°0.4°
C02N01H012H011120.0°180.0°
C12C11C09C080.2°0.1°
C12C11C09H111180.0°180.0°
C12C11C09CL10179.8°180.0°
C08C09C11CL10180.0°179.9°
C09C08C07H071179.9°180.0°
C08C09C11H111179.7°180.0°
C11C09C08H081179.9°179.9°
CL10C09C08H0810.0°0.0°
CL10C09C11H1110.2°0.0°
H031C03C04H0410.1°0.1°
H071C07C08H0810.1°0.0°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon