Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

QCQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CL1C2sing1.74Å1.75Å
C2N3doub1.32Å1.32ÅAromatic
C2N1sing1.32Å1.33ÅAromatic
N3C4sing1.33Å1.34ÅAromatic
N1C6doub1.33Å1.35ÅAromatic
O3'C3'sing1.43Å1.42Å
C4C5doub1.40Å1.38ÅAromatic
C4N9sing1.37Å1.38ÅAromatic
C6N6sing1.38Å1.35Å
C6C5sing1.41Å1.41ÅAromatic
C1'C2'sing1.55Å1.52Å
C1'N9sing1.46Å1.46Å
C1'O4'sing1.44Å1.41Å
C2'C3'sing1.55Å1.52Å
C2'F04sing1.40Å1.40Å
N6C29sing1.47Å1.45Å
C3'C4'sing1.54Å1.53Å
C5N7sing1.36Å1.39ÅAromatic
N9C8sing1.36Å1.37ÅAromatic
O4'C4'sing1.44Å1.45Å
C4'C5'sing1.53Å1.51Å
C29C30sing1.51Å1.51Å
C8N7doub1.30Å1.31ÅAromatic
C31C30doub1.38Å1.39ÅAromatic
C31C32sing1.38Å1.39ÅAromatic
C30C35sing1.38Å1.39ÅAromatic
C32C33doub1.38Å1.38ÅAromatic
C35C34doub1.38Å1.39ÅAromatic
C33C34sing1.38Å1.38ÅAromatic
C5'O5'sing1.43Å1.44Å
O5'PAsing1.61Å1.57Å
O2APAdoub1.48Å1.52Å
PAO1Asing1.61Å1.56Å
PAC3Asing1.82Å1.80Å
O1BPBdoub1.48Å1.50Å
C3APBsing1.82Å1.79Å
PBO3Bsing1.61Å1.54Å
PBO2Bsing1.61Å1.54Å
O3'H1sing0.97Å0.95Å
C3'H2sing1.09Å1.10Å
C2'H3sing1.09Å1.10Å
C4'H4sing1.09Å1.10Å
C5'H5sing1.09Å1.10Å
C5'H6sing1.09Å1.10Å
C3AH7sing1.09Å1.10Å
C3AH8sing1.09Å1.10Å
O2BH9sing0.97Å0.95Å
O3BH10sing0.97Å0.95Å
O1AH11sing0.97Å0.95Å
C1'H12sing1.09Å1.10Å
C8H13sing1.08Å1.08Å
N6H14sing0.97Å1.00Å
C29H15sing1.09Å1.10Å
C29H16sing1.09Å1.10Å
C31H17sing1.08Å1.08Å
C32H18sing1.08Å1.08Å
C33H19sing1.08Å1.08Å
C34H20sing1.08Å1.08Å
C35H21sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CL1C2N3114.9°118.8°
CL1C2N1114.9°118.8°
N3C2N1130.2°122.4°
C2N3C4110.8°120.6°
C2N1C6117.7°121.2°
N3C4C5126.5°119.1°
N3C4N9127.5°134.9°
N1C6N6118.4°120.8°
N1C6C5118.3°118.4°
O3'C3'C2'112.4°110.5°
O3'C3'C4'112.7°110.5°
C3'O3'H1109.5°114.0°
O3'C3'H2110.4°110.5°
C5C4N9105.8°106.0°
C4C5C6116.3°118.2°
C4C5N7110.7°107.2°
C4N9C1'126.3°126.3°
C4N9C8105.7°107.4°
N6C6C5123.2°120.8°
C6N6C29123.8°120.0°
C6N6H14105.7°120.0°
C6C5N7133.0°134.6°
C2'C1'N9114.6°110.7°
C2'C1'O4'105.2°103.5°
C1'C2'C3'102.1°102.1°
C1'C2'F04107.6°110.9°
C1'C2'H3111.8°110.9°
C2'C1'H12108.4°110.6°
N9C1'O4'109.4°110.6°
C1'N9C8128.0°126.3°
N9C1'H12109.2°110.5°
C1'O4'C4'109.4°107.0°
O4'C1'H12109.8°110.8°
C3'C2'F04109.1°110.9°
C2'C3'C4'103.0°104.2°
C2'C3'H2109.1°110.6°
C3'C2'H3111.8°110.9°
F04C2'H3113.8°110.8°
N6C29C30115.0°109.5°
C29N6H14105.8°120.0°
N6C29H15108.1°109.5°
N6C29H16108.1°109.5°
C3'C4'O4'106.6°107.3°
C3'C4'C5'114.2°109.9°
C4'C3'H2108.9°110.5°
C3'C4'H4108.4°109.9°
C5N7C8103.8°109.4°
N9C8N7114.1°110.0°
N9C8H13123.0°125.0°
O4'C4'C5'109.5°109.9°
O4'C4'H4109.4°110.0°
C4'C5'O5'108.6°109.5°
C5'C4'H4108.6°109.9°
C4'C5'H5109.7°109.5°
C4'C5'H6109.7°109.5°
C29C30C31120.6°120.0°
C29C30C35120.8°120.0°
C30C29H15108.1°109.5°
C30C29H16108.1°109.5°
N7C8H13123.0°125.0°
C30C31C32120.7°120.1°
C31C30C35118.6°120.0°
C30C31H17119.6°120.0°
C31C32C33120.2°120.0°
C32C31H17119.6°120.0°
C31C32H18119.9°120.0°
C30C35C34120.7°120.0°
C30C35H21119.7°120.0°
C32C33C34119.7°120.0°
C33C32H18119.9°120.0°
C32C33H19120.2°120.0°
C35C34C33120.2°120.0°
C35C34H20119.9°120.0°
C34C35H21119.6°120.0°
C34C33H19120.1°120.0°
C33C34H20119.9°119.9°
C5'O5'PA119.8°123.0°
O5'C5'H5109.7°109.5°
O5'C5'H6109.7°109.5°
O5'PAO2A116.7°109.5°
O5'PAO1A103.8°109.5°
O5'PAC3A105.6°109.5°
O2APAO1A108.6°109.5°
O2APAC3A113.1°109.5°
O1APAC3A108.4°109.5°
PAO1AH11109.5°114.0°
PAC3APB113.5°109.5°
PAC3AH7108.4°109.5°
PAC3AH8108.5°109.5°
O1BPBC3A108.6°109.5°
O1BPBO3B113.3°109.5°
O1BPBO2B112.7°109.5°
C3APBO3B104.6°109.4°
C3APBO2B109.8°109.5°
PBC3AH7108.5°109.4°
PBC3AH8108.4°109.4°
O3BPBO2B107.5°109.4°
PBO3BH10109.5°114.0°
PBO2BH9109.5°114.0°
H5C5'H6109.5°109.4°
H7C3AH8109.5°109.5°
H15C29H16109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CL1C2N3N1177.0°179.9°
CL1C2N3C4173.5°180.0°
CL1C2N1C6174.2°179.7°
N3C2N1C62.8°0.4°
C2N3C4C50.8°0.1°
C2N3C4N9174.5°179.5°
N1C2N3C43.5°0.0°
C2N1C6N6177.2°180.0°
C2N1C6C50.7°0.6°
N3C4C5N9176.1°179.6°
N3C4C5C62.1°0.2°
N3C4N9C1'4.6°0.4°
N3C4C5N7175.0°180.0°
N3C4N9C8174.9°179.9°
N1C6C5C42.8°0.5°
N1C6N6C5176.3°179.4°
N1C6N6C29158.4°0.0°
N1C6C5N7173.6°179.8°
N1C6N6H1436.4°180.0°
O3'C3'C2'C1'89.0°97.8°
O3'C3'C2'C4'121.6°118.7°
O3'C3'C2'H2122.8°122.6°
O3'C3'C2'F04157.3°144.0°
O3'C3'C4'H2122.9°122.6°
O3'C3'C4'O4'103.5°120.7°
O3'C3'C4'C5'135.5°119.9°
O3'C3'C2'H330.6°20.5°
O3'C3'C4'H414.2°1.1°
C4C5C6N6179.1°179.9°
C4C5C6N7176.4°179.7°
C5C4N9C1'179.4°179.9°
C5C4N9C81.1°0.4°
C4C5N7C80.5°0.3°
N9C4C5C6178.2°179.8°
C4N9C1'C2'95.8°84.7°
C4N9C1'C8179.4°179.7°
C4N9C1'O4'146.3°161.2°
N9C4C5N71.1°0.4°
C4N9C8N70.9°0.2°
C4N9C1'H1226.1°38.2°
C4N9C8H13179.1°179.7°
C6N6C29H14121.9°180.0°
N6C6C5N72.7°0.4°
C6N6C29C30138.3°180.0°
C6N6C29H15100.8°60.0°
C6N6C29H1617.5°60.0°
C5C6N6C2925.4°179.4°
C6C5N7C8177.1°180.0°
C5C6N6H14147.3°0.6°
C2'C1'N9O4'117.9°114.1°
C2'C1'N9H12121.9°122.9°
C2'C1'O4'H12116.5°118.6°
C1'C2'C3'F04113.7°118.2°
C1'C2'C3'H3119.6°118.2°
C1'C2'F04H3124.4°123.6°
C1'C2'C3'C4'32.6°20.9°
C2'C1'N9C884.8°94.9°
C2'C1'O4'C4'26.8°40.1°
C1'C2'C3'H2148.2°139.6°
N9C1'O4'H12119.9°122.9°
N9C1'C2'C3'157.3°155.6°
N9C1'C2'F0442.5°37.3°
N9C1'O4'C4'150.4°158.6°
C1'N9C8N7179.6°179.9°
N9C1'C2'H383.1°86.2°
C1'N9C8H130.4°0.0°
O4'C1'C2'C3'37.0°37.0°
O4'C1'C2'F0477.8°81.2°
C1'O4'C4'C3'5.4°26.5°
O4'C1'N9C833.1°19.1°
C1'O4'C4'C5'129.4°145.9°
O4'C1'C2'H3156.6°155.2°
C1'O4'C4'H4111.6°93.0°
C3'C2'F04H3125.6°123.6°
C2'C3'C4'H2115.7°118.8°
C2'C3'C4'O4'17.9°2.0°
C2'C3'C4'C5'103.2°121.4°
C2'C3'O3'H1180.0°65.3°
C2'C3'C4'H4135.6°117.5°
C3'C2'C1'H1280.4°81.6°
F04C2'C3'C4'81.1°97.3°
F04C2'C3'H234.5°21.4°
F04C2'C1'H12164.8°160.1°
N6C29C30H15120.8°120.0°
N6C29C30H16120.8°120.1°
N6C29C30C3190.8°89.7°
N6C29C30C3590.8°90.0°
N6C29H15H16117.5°120.0°
C3'C4'O4'C5'124.0°119.4°
C3'C4'O4'H4117.0°119.5°
C3'C4'C5'H4121.1°121.1°
C3'C4'C5'O5'178.0°175.0°
C4'C3'O3'H164.2°180.0°
C4'C3'C2'H3152.2°139.1°
C3'C4'C5'H562.1°55.0°
C3'C4'C5'H658.2°65.0°
C5N7C8N90.2°0.0°
C5N7C8H13179.8°180.0°
N9C8N7H13180.0°179.9°
C8N9C1'H12153.3°142.2°
O4'C4'C5'H4119.5°121.1°
O4'C4'C5'O5'58.6°67.2°
O4'C4'C3'H2133.6°116.7°
O4'C4'C5'H5178.5°172.8°
O4'C4'C5'H661.2°52.9°
C4'O4'C1'H1289.7°78.5°
C4'C5'O5'H5119.8°120.0°
C4'C5'O5'H6119.9°120.0°
C4'C5'O5'PA156.1°180.0°
C5'C4'C3'H212.5°2.7°
C4'C5'H5H6120.4°120.0°
C29C30C31C35178.4°179.7°
C29C30C31C32178.6°180.0°
C29C30C35C34178.1°179.8°
C30C29N6H1416.4°0.0°
C30C29H15H16117.5°120.0°
C29C30C31H171.3°0.1°
C29C30C35H211.9°0.0°
C30C31C32H17180.0°179.9°
C30C31C32C330.6°0.1°
C31C30C35C340.3°0.5°
C31C30C29H15148.3°150.3°
C31C30C29H1630.0°30.4°
C30C31C32H18179.4°179.9°
C31C30C35H21179.7°179.7°
C32C31C30C350.2°0.3°
C31C32C33H18180.0°180.0°
C31C32C33C340.5°0.0°
C31C32C33H19179.5°180.0°
C30C35C34H21180.0°179.8°
C30C35C34C330.4°0.4°
C35C30C29H1530.0°30.0°
C35C30C29H16148.4°150.0°
C35C30C31H17179.8°179.8°
C30C35C34H20179.6°179.7°
C32C33C34C350.0°0.1°
C32C33C34H19180.0°180.0°
C33C32C31H17179.3°180.0°
C32C33C34H20180.0°180.0°
C35C34C33H20180.0°179.9°
C35C34C33H19180.0°179.8°
C34C33C32H18179.5°180.0°
C33C34C35H21179.5°179.8°
C5'O5'PAO2A53.6°55.0°
C5'O5'PAO1A173.0°65.0°
C5'O5'PAC3A73.0°175.0°
O5'C5'C4'H460.9°54.0°
O5'C5'H5H6120.4°120.0°
O5'PAO2AO1A116.8°120.0°
O5'PAO2AC3A122.8°120.0°
O5'PAO1AC3A111.9°120.0°
O5'PAC3APB55.3°180.0°
PAO5'C5'H536.3°60.0°
PAO5'C5'H684.0°60.0°
O5'PAC3AH7176.0°60.0°
O5'PAC3AH865.3°60.0°
O5'PAO1AH11124.8°60.0°
O2APAO1AC3A123.3°120.0°
O2APAC3APB175.9°60.0°
O2APAC3AH755.3°60.0°
O2APAC3AH863.5°180.0°
O2APAO1AH110.0°180.0°
O1APAC3APB55.4°60.0°
O1APAC3AH765.3°180.0°
O1APAC3AH8176.0°60.0°
PAC3APBO1B60.2°60.0°
PAC3APBH7120.6°120.0°
PAC3APBH8120.6°120.0°
PAC3APBO3B61.1°60.0°
PAC3APBO2B176.2°180.0°
PAC3AH7H8118.2°120.0°
C3APAO1AH11123.3°60.0°
O1BPBC3AO3B121.3°120.0°
O1BPBC3AO2B123.6°120.0°
O1BPBO3BO2B125.2°120.1°
O1BPBC3AH7179.2°60.0°
O1BPBC3AH860.5°180.0°
O1BPBO2BH90.0°60.0°
O1BPBO3BH100.0°180.0°
C3APBO3BO2B116.7°119.9°
PBC3AH7H8118.1°119.9°
C3APBO2BH9121.2°180.0°
C3APBO3BH10118.1°60.0°
O3BPBC3AH759.5°179.9°
O3BPBC3AH8178.3°60.0°
O3BPBO2BH9125.5°60.0°
O2BPBC3AH755.6°60.0°
O2BPBC3AH863.2°60.0°
O2BPBO3BH10125.2°60.0°
H1O3'C3'H257.9°57.4°
H2C3'C2'H392.2°102.1°
H2C3'C4'H4108.7°123.7°
H3C2'C1'H1239.2°36.6°
H4C4'C5'H559.0°66.1°
H4C4'C5'H6179.3°174.0°
H14N6C29H15137.2°120.0°
H14N6C29H16104.4°120.0°
H17C31C32H180.7°0.0°
H18C32C33H190.5°0.0°
H19C33C34H200.0°0.0°
H20C34C35H210.5°0.1°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon