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QCB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CGXCBXsing1.53Å1.52Å
CBXOGXsing1.43Å1.40Å
CBXCAXsing1.53Å1.53Å
NXCAXsing1.46Å1.45Å
NXCCAsing1.35Å1.45Å
CAXCXsing1.51Å1.53Å
CCACP2sing1.51Å1.50Å
CCAOCAdoub1.21Å1.18Å
CP2P1sing1.82Å1.87Å
CXOXdoub1.21Å1.25Å
CXOXTsing1.34Å1.25Å
OP3P1doub1.48Å1.50Å
P1OP1sing1.61Å1.50Å
P1O5'sing1.61Å1.63Å
C5'O5'sing1.43Å1.39Å
C5'C4'sing1.53Å1.48Å
C3'C4'sing1.54Å1.49Å
C3'O3'sing1.43Å1.45Å
C3'C2'sing1.55Å1.48Å
C4'O4'sing1.44Å1.47Å
C2'O2'sing1.43Å1.44Å
C2'C1'sing1.55Å1.50Å
O4'C1'sing1.44Å1.48Å
C1'N9sing1.46Å1.43Å
C8N9sing1.36Å1.27ÅAromatic
C8N7doub1.30Å1.33ÅAromatic
N9C4sing1.37Å1.28ÅAromatic
N7C5sing1.35Å1.39ÅAromatic
C4C5doub1.41Å1.41ÅAromatic
C4N3sing1.33Å1.35ÅAromatic
C5C6sing1.41Å1.37ÅAromatic
N3C2doub1.32Å1.34ÅAromatic
C6N6sing1.38Å1.45Å
C6N1doub1.33Å1.33ÅAromatic
C2N1sing1.32Å1.35ÅAromatic
C2H1sing1.08Å1.08Å
CAXH2sing1.09Å1.10Å
CBXH3sing1.09Å1.10Å
CGXH4sing1.09Å1.10Å
CGXH5sing1.09Å1.10Å
CGXH6sing1.09Å1.10Å
OGXH7sing0.97Å0.95Å
NXH8sing0.97Å1.00Å
CP2H9sing1.09Å1.10Å
CP2H10sing1.09Å1.10Å
OP1H11sing0.97Å0.95Å
C5'H12sing1.09Å1.10Å
C5'H13sing1.09Å1.10Å
C4'H14sing1.09Å1.10Å
C3'H15sing1.09Å1.10Å
O3'H16sing0.97Å0.95Å
C2'H17sing1.09Å1.10Å
O2'H18sing0.97Å0.95Å
C1'H19sing1.09Å1.10Å
C8H20sing1.08Å1.08Å
N6H21sing0.97Å1.00Å
N6H22sing0.97Å1.00Å
OXTH23sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CGXCBXOGX111.8°109.5°
CGXCBXCAX111.6°109.5°
CGXCBXH3105.0°109.5°
CBXCGXH4109.5°109.5°
CBXCGXH5109.5°109.5°
CBXCGXH6109.4°109.5°
OGXCBXCAX116.3°109.5°
OGXCBXH3106.3°109.4°
CBXOGXH7109.5°113.9°
CBXCAXNX114.3°109.4°
CBXCAXCX113.0°109.5°
CBXCAXH2106.3°109.4°
CAXCBXH3104.8°109.5°
CAXNXCCA115.0°120.0°
NXCAXCX109.0°109.5°
NXCAXH2107.3°109.5°
CAXNXH8122.5°120.0°
NXCCACP2121.5°120.0°
NXCCAOCA121.1°120.0°
CCANXH8122.5°120.0°
CAXCXOX122.0°120.0°
CAXCXOXT119.2°120.0°
CXCAXH2106.4°109.5°
CP2CCAOCA117.5°120.0°
CCACP2P1108.6°109.5°
CCACP2H9109.7°109.5°
CCACP2H10109.7°109.4°
CP2P1OP3103.7°109.5°
CP2P1OP1113.6°109.5°
CP2P1O5'112.7°109.5°
P1CP2H9109.7°109.5°
P1CP2H10109.7°109.5°
OXCXOXT118.7°120.0°
CXOXTH23109.5°117.0°
OP3P1OP1110.6°109.5°
OP3P1O5'110.4°109.4°
OP1P1O5'106.0°109.5°
P1OP1H11109.5°114.0°
P1O5'C5'118.0°123.0°
O5'C5'C4'107.8°109.5°
O5'C5'H12109.9°109.5°
O5'C5'H13109.9°109.5°
C5'C4'C3'109.7°109.9°
C5'C4'O4'109.2°109.9°
C4'C5'H12109.9°109.5°
C4'C5'H13109.9°109.4°
C5'C4'H14109.9°109.9°
C4'C3'O3'107.3°110.5°
C4'C3'C2'106.0°104.2°
C3'C4'O4'108.1°107.3°
C3'C4'H14109.9°110.0°
C4'C3'H15110.0°110.5°
O3'C3'C2'112.8°110.5°
O3'C3'H15110.5°110.4°
C3'O3'H16109.5°114.0°
C3'C2'O2'112.0°110.9°
C3'C2'C1'105.7°102.1°
C2'C3'H15110.1°110.6°
C3'C2'H17109.0°110.9°
C4'O4'C1'106.3°107.0°
O4'C4'H14110.1°109.9°
O2'C2'C1'111.8°110.9°
O2'C2'H17109.5°110.8°
C2'O2'H18109.5°114.0°
C2'C1'O4'104.5°103.5°
C2'C1'N9113.4°110.6°
C1'C2'H17108.8°111.0°
C2'C1'H19108.8°110.7°
O4'C1'N9111.3°110.6°
O4'C1'H19109.1°110.8°
C1'N9C8123.4°126.3°
C1'N9C4122.7°126.2°
N9C1'H19109.6°110.6°
N9C8N7112.3°110.0°
C8N9C4113.8°107.4°
N9C8H20123.9°124.9°
C8N7C5101.6°109.5°
N7C8H20123.9°125.1°
N9C4C5102.9°106.0°
N9C4N3131.3°135.0°
N7C5C4109.3°107.1°
N7C5C6135.1°134.7°
C5C4N3125.8°119.0°
C4C5C6115.5°118.2°
C4N3C2112.1°120.7°
C5C6N6120.3°120.8°
C5C6N1120.7°118.4°
N3C2N1126.9°122.4°
N3C2H1116.5°118.8°
N6C6N1119.0°120.8°
C6N6H21109.5°120.0°
C6N6H22109.5°120.0°
C6N1C2119.0°121.2°
N1C2H1116.5°118.8°
H4CGXH5109.4°109.5°
H4CGXH6109.5°109.4°
H5CGXH6109.5°109.4°
H9CP2H10109.5°109.5°
H12C5'H13109.5°109.5°
H21N6H22109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CGXCBXOGXCAX129.8°120.1°
CGXCBXOGXH3114.0°120.0°
CGXCBXCAXH3113.1°120.0°
CGXCBXCAXNX23.4°55.0°
CGXCBXCAXCX148.9°175.0°
CGXCBXCAXH294.8°65.0°
CBXCGXH4H5120.0°120.0°
CBXCGXH4H6120.0°120.0°
CBXCGXH5H6120.0°120.0°
CGXCBXOGXH7180.0°60.0°
OGXCBXCAXH3117.0°119.9°
OGXCBXCAXNX106.6°65.0°
OGXCBXCAXCX18.9°55.0°
OGXCBXCAXH2135.3°175.0°
OGXCBXCGXH4180.0°59.9°
OGXCBXCGXH560.0°180.0°
OGXCBXCGXH660.0°60.1°
CBXCAXNXCX127.6°120.0°
CBXCAXNXH2117.6°120.0°
CBXCAXNXCCA154.1°85.0°
CBXCAXCXH2116.3°120.0°
CBXCAXCXOX98.5°120.0°
CBXCAXCXOXT85.7°60.0°
CAXCBXCGXH447.8°180.0°
CAXCBXCGXH572.2°60.0°
CAXCBXCGXH6167.8°60.0°
CAXCBXOGXH750.2°60.0°
CBXCAXNXH825.9°95.1°
CAXNXCCAH8180.0°179.9°
NXCAXCXH2115.4°120.0°
CAXNXCCACP2178.7°179.9°
CAXNXCCAOCA1.2°0.0°
NXCAXCXOX29.8°0.0°
NXCAXCXOXT146.0°180.0°
NXCAXCBXH3136.5°175.0°
CCANXCAXCX78.3°155.0°
NXCCACP2OCA179.9°179.9°
NXCCACP2P1106.2°100.0°
CCANXCAXH236.5°34.9°
NXCCACP2H913.7°20.0°
NXCCACP2H10134.0°140.0°
CAXCXOXOXT175.9°180.0°
CXCAXCBXH398.0°64.9°
CXCAXNXH8101.7°24.9°
CAXCXOXTH23176.0°180.0°
CCACP2P1H9119.9°120.0°
CCACP2P1H10119.9°120.0°
CCACP2P1OP3159.6°55.0°
CCACP2P1OP139.6°65.0°
CCACP2P1O5'80.9°175.0°
CP2CCANXH81.3°0.0°
CCACP2H9H10120.4°119.9°
OCACCACP2P173.8°79.9°
OCACCANXH8178.8°179.9°
OCACCACP2H9166.3°160.0°
OCACCACP2H1046.1°40.1°
CP2P1OP3OP1122.1°120.0°
CP2P1OP3O5'121.0°120.0°
CP2P1OP1O5'124.3°120.0°
CP2P1O5'C5'53.0°175.0°
P1CP2H9H10120.4°120.0°
CP2P1OP1H11116.1°60.0°
OXCXCAXH2145.2°120.0°
OXCXOXTH230.0°0.0°
OXTCXCAXH230.6°60.0°
OP3P1OP1O5'119.7°120.0°
OP3P1O5'C5'62.5°55.0°
OP3P1CP2H939.8°65.0°
OP3P1CP2H1080.5°175.0°
OP3P1OP1H110.0°180.0°
OP1P1O5'C5'177.8°64.9°
OP1P1CP2H980.3°175.0°
OP1P1CP2H10159.5°55.0°
P1O5'C5'C4'174.3°180.0°
O5'P1CP2H9159.2°55.0°
O5'P1CP2H1038.9°65.1°
O5'P1OP1H11119.6°60.1°
P1O5'C5'H1265.9°60.0°
P1O5'C5'H1354.6°60.1°
O5'C5'C4'H12119.7°120.0°
O5'C5'C4'H13119.7°120.0°
O5'C5'C4'C3'169.6°175.7°
O5'C5'C4'O4'72.1°66.5°
O5'C5'H12H13120.8°120.0°
O5'C5'C4'H1448.8°54.5°
C5'C4'C3'O4'119.0°119.4°
C5'C4'C3'H14120.9°121.1°
C5'C4'C3'O3'124.4°119.9°
C5'C4'C3'C2'114.9°121.4°
C5'C4'O4'H14120.7°121.0°
C5'C4'O4'C1'134.5°146.0°
C4'C5'H12H13120.8°119.9°
C5'C4'C3'H154.1°2.6°
C4'C3'O3'C2'116.4°114.8°
C4'C3'O3'H15119.9°122.5°
C4'C3'C2'H15118.9°118.7°
C3'C4'O4'H14120.0°119.6°
C4'C3'C2'O2'143.5°139.1°
C4'C3'C2'C1'21.5°20.9°
C3'C4'O4'C1'15.2°26.5°
C3'C4'C5'H1270.6°64.3°
C3'C4'C5'H1349.9°55.7°
C4'C3'O3'H16180.0°180.0°
C4'C3'C2'H1795.2°97.4°
O3'C3'C2'H15123.9°122.5°
O3'C3'C4'O4'116.7°120.7°
O3'C3'C2'O2'26.3°20.4°
O3'C3'C2'C1'95.6°97.8°
O3'C3'C4'H143.5°1.2°
O3'C3'C2'H17147.6°143.9°
C2'C3'C4'O4'4.1°2.0°
C3'C2'O2'C1'118.4°112.7°
C3'C2'O2'H17121.0°123.6°
C3'C2'C1'H17116.9°118.2°
C3'C2'C1'O4'30.8°37.1°
C3'C2'C1'N9152.2°155.5°
C2'C3'C4'H14124.2°117.5°
C2'C3'O3'H1663.6°65.2°
C3'C2'O2'H18180.0°61.5°
C3'C2'C1'H1985.5°81.6°
C4'O4'C1'C2'28.2°40.1°
C4'O4'C1'N9151.0°158.5°
O4'C4'C5'H1247.6°53.6°
O4'C4'C5'H13168.2°173.6°
O4'C4'C3'H15123.1°116.8°
C4'O4'C1'H1987.9°78.5°
O2'C2'C1'H17121.1°123.6°
O2'C2'C1'O4'152.9°155.2°
O2'C2'C1'N985.7°86.3°
O2'C2'C3'H1597.6°102.2°
O2'C2'C1'H1936.5°36.6°
C2'C1'O4'N9122.8°118.5°
C2'C1'O4'H19116.2°118.6°
C2'C1'N9H19121.8°123.0°
C2'C1'N9C872.8°94.9°
C2'C1'N9C4111.3°85.0°
C1'C2'C3'H15140.4°139.7°
C1'C2'O2'H1861.6°174.2°
O4'C1'N9H19120.7°123.0°
O4'C1'N9C844.7°19.1°
O4'C1'N9C4131.2°161.0°
C1'O4'C4'H14104.8°93.0°
O4'C1'C2'H1786.0°81.2°
C1'N9C8C4176.3°179.9°
C1'N9C8N7175.6°180.0°
C1'N9C4C5178.0°180.0°
C1'N9C4N31.0°0.1°
N9C1'C2'H1735.4°37.3°
C1'N9C8H204.4°0.1°
N9C8N7H20180.0°179.9°
N9C8N7C52.7°0.0°
C8N9C4C51.7°0.0°
C8N9C4N3177.3°180.0°
C8N9C1'H19165.4°142.1°
N7C8N9C40.7°0.1°
C8N7C5C43.7°0.0°
C8N7C5C6179.3°180.0°
N9C4C5N73.4°0.0°
N9C4C5N3179.1°180.0°
N9C4C5C6178.9°180.0°
N9C4N3C2179.0°180.0°
C4N9C1'H1910.5°37.9°
C4N9C8H20179.3°180.0°
N7C5C4C6177.7°180.0°
N7C5C4N3175.7°180.0°
N7C5C6N63.6°0.0°
N7C5C6N1176.3°180.0°
C5N7C8H20177.3°180.0°
C5C4N3C22.3°0.0°
C4C5C6N6179.5°180.0°
C4C5C6N10.7°0.0°
N3C4C5C62.0°0.0°
C4N3C2N11.3°0.1°
C4N3C2H1178.7°180.0°
C5C6N6N1179.9°180.0°
C5C6N1C20.2°0.0°
C5C6N6H21179.9°0.0°
C5C6N6H2259.9°180.0°
N3C2N1C60.2°0.1°
N3C2N1H1180.0°179.9°
N6C6N1C2179.7°179.9°
C6N6H21H22120.0°180.0°
C6N1C2H1179.8°180.0°
N1C6N6H210.0°180.0°
N1C6N6H22120.0°0.0°
H2CAXCBXH318.3°55.1°
H2CAXNXH8143.5°145.0°
H3CBXCGXH465.2°60.0°
H3CBXCGXH5174.8°60.1°
H3CBXCGXH654.8°180.0°
H3CBXOGXH766.0°180.0°
H4CGXH5H6120.0°119.9°
H12C5'C4'H14168.5°174.5°
H13C5'C4'H1471.0°65.5°
H14C4'C3'H15116.8°123.7°
H15C3'O3'H1660.1°57.4°
H15C3'C2'H1723.7°21.4°
H17C2'O2'H1859.0°62.1°
H17C2'C1'H19157.6°160.2°

247947

PDB entries from 2026-01-21

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