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SummaryGeometryRelated PDB entries

Q8D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N01N03doub1.29Å1.33ÅAromatic
N01N02sing1.40Å1.35ÅAromatic
N03C05sing1.35Å1.37ÅAromatic
C17C14sing1.53Å1.53Å
C17C18sing1.53Å1.53Å
N02C10sing1.46Å1.46Å
N02C04sing1.37Å1.37ÅAromatic
C10C14sing1.53Å1.54Å
C10C15sing1.53Å1.53Å
C05C07doub1.40Å1.41ÅAromatic
C05C04sing1.41Å1.39ÅAromatic
C07C08sing1.39Å1.40ÅAromatic
C04C09doub1.39Å1.39ÅAromatic
C18C16sing1.53Å1.53Å
C16C15sing1.53Å1.53Å
C08C11doub1.40Å1.40ÅAromatic
C08C06sing1.48Å1.48Å
C09C11sing1.36Å1.40ÅAromatic
O13C06doub1.21Å1.34Å
C06O12sing1.35Å1.21Å
C18H1sing1.09Å1.10Å
C18H2sing1.09Å1.10Å
C17H3sing1.09Å1.10Å
C17H4sing1.09Å1.10Å
C16H5sing1.09Å1.10Å
C16H6sing1.09Å1.10Å
C15H7sing1.09Å1.10Å
C15H8sing1.09Å1.10Å
C11H9sing1.08Å1.08Å
C07H10sing1.08Å1.08Å
C09H11sing1.08Å1.08Å
C10H12sing1.09Å1.10Å
O12H13sing0.97Å0.95Å
C14H14sing1.09Å1.10Å
C14H15sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N03N01N02108.1°109.5°
N01N03C05108.3°110.1°
N01N02C10119.0°126.7°
N01N02C04110.6°106.7°
N03C05C07130.6°133.0°
N03C05C04109.0°107.6°
C14C17C18112.3°109.5°
C17C14C10111.7°109.5°
C14C17H3108.8°109.5°
C14C17H4108.7°109.5°
C17C14H14108.9°109.5°
C17C14H15109.0°109.5°
C17C18C16112.9°109.5°
C17C18H1108.6°109.4°
C17C18H2108.6°109.5°
C18C17H3108.8°109.4°
C18C17H4108.8°109.5°
C10N02C04130.4°126.7°
N02C10C14111.2°109.5°
N02C10C15116.6°109.5°
N02C10H12106.9°109.5°
N02C04C05104.0°106.0°
N02C04C09133.8°133.7°
C14C10C15109.3°109.5°
C14C10H12106.0°109.4°
C10C14H14108.9°109.5°
C10C14H15108.9°109.5°
C10C15C16109.8°109.4°
C10C15H7109.4°109.5°
C10C15H8109.4°109.4°
C15C10H12106.1°109.5°
C07C05C04120.3°119.3°
C05C07C08118.0°119.6°
C05C07H10121.0°120.2°
C05C04C09122.1°120.3°
C07C08C11120.4°120.3°
C07C08C06123.3°119.9°
C08C07H10121.0°120.2°
C04C09C11117.5°120.1°
C04C09H11121.3°119.9°
C18C16C15111.9°109.5°
C16C18H1108.6°109.5°
C16C18H2108.6°109.5°
C18C16H5108.9°109.5°
C18C16H6108.9°109.5°
C15C16H5108.9°109.4°
C15C16H6108.8°109.5°
C16C15H7109.4°109.5°
C16C15H8109.4°109.5°
C11C08C06116.3°119.8°
C08C11C09121.6°120.4°
C08C11H9119.2°119.8°
C08C06O13113.9°120.0°
C08C06O12124.1°120.0°
C09C11H9119.2°119.8°
C11C09H11121.3°119.9°
O13C06O12121.9°120.0°
C06O12H13109.5°117.0°
H1C18H2109.5°109.4°
H3C17H4109.5°109.5°
H5C16H6109.5°109.5°
H7C15H8109.5°109.5°
H14C14H15109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N03N01N02C10178.8°180.0°
N03N01N02C040.6°0.3°
N01N03C05C07179.9°179.9°
N01N03C05C040.1°0.4°
N02N01N03C050.4°0.4°
N01N02C10C04177.7°179.6°
N01N02C10C14109.9°59.9°
N01N02C10C15123.8°60.1°
N01N02C04C050.5°0.0°
N01N02C04C09180.0°180.0°
N01N02C10H125.3°179.9°
N03C05C04N020.2°0.2°
N03C05C07C04180.0°179.7°
N03C05C07C08179.8°179.7°
N03C05C04C09179.8°179.8°
N03C05C07H100.2°0.4°
C14C17C18H3120.4°120.0°
C14C17C18H4120.4°120.0°
C17C14C10N02171.4°180.0°
C17C14C10H14120.3°120.0°
C17C14C10H15120.4°120.0°
C17C14C10C1558.4°60.0°
C14C17C18C1648.7°60.0°
C14C17C18H171.8°60.0°
C14C17C18H2169.2°180.0°
C14C17H3H4118.7°120.0°
C17C14C10H1255.6°60.0°
C17C14H14H15119.0°120.0°
C18C17C14C1052.3°60.0°
C17C18C16H1120.5°120.0°
C17C18C16H2120.5°120.1°
C17C18C16C1551.7°60.0°
C17C18H1H2118.5°120.0°
C18C17H3H4118.8°120.0°
C17C18C16H5172.0°179.9°
C17C18C16H668.7°60.0°
C18C17C14H14172.7°180.0°
C18C17C14H1568.0°60.1°
N02C10C14C15130.2°120.0°
N02C10C14H12115.8°120.0°
N02C10C15H12118.9°120.0°
C10N02C04C05178.4°179.7°
C10N02C04C092.2°0.3°
N02C10C15C16172.3°180.0°
N02C10C15H752.3°60.0°
N02C10C15H867.7°60.0°
N02C10C14H1451.1°60.0°
N02C10C14H1568.2°60.0°
C04N02C10C1467.8°119.7°
C04N02C10C1558.5°120.3°
N02C04C05C07179.7°179.9°
N02C04C05C09179.5°180.0°
N02C04C09C11179.8°180.0°
N02C04C09H110.2°0.1°
C04N02C10H12177.0°0.3°
C14C10C15H12113.9°120.0°
C14C10C15C1660.5°60.0°
C10C14C17H3172.7°60.0°
C10C14C17H468.1°180.0°
C14C10C15H7179.4°60.0°
C14C10C15H859.5°180.0°
C10C14H14H15119.0°120.0°
C10C15C16C1857.6°60.0°
C10C15C16H7120.0°120.0°
C10C15C16H8120.0°120.0°
C10C15C16H5178.0°180.0°
C10C15C16H662.7°60.0°
C10C15H7H8119.9°119.9°
C15C10C14H14178.7°180.0°
C15C10C14H1562.0°60.0°
C05C07C08H10180.0°179.9°
C07C05C04C090.2°0.0°
C05C07C08C110.4°0.0°
C05C07C08C06179.0°180.0°
C04C05C07C080.2°0.0°
C05C04C09C110.5°0.0°
C04C05C07H10179.8°180.0°
C05C04C09H11179.5°179.9°
C07C08C11C06178.7°180.0°
C07C08C11C090.7°0.0°
C07C08C06O132.9°0.0°
C07C08C06O12179.9°180.0°
C07C08C11H9179.3°180.0°
C04C09C11C080.7°0.1°
C04C09C11H11180.0°179.9°
C04C09C11H9179.3°180.0°
C18C16C15H5120.4°120.0°
C18C16C15H6120.4°120.0°
C16C18H1H2118.4°120.0°
C16C18C17H3169.1°60.0°
C16C18C17H471.7°180.0°
C18C16H5H6118.9°120.0°
C18C16C15H7177.7°60.0°
C18C16C15H862.4°180.0°
C15C16C18H168.8°60.0°
C15C16C18H2172.2°179.9°
C15C16H5H6118.9°120.0°
C16C15H7H8119.9°120.1°
C16C15C10H1253.4°60.0°
C08C11C09H9180.0°179.9°
C11C08C06O13175.8°180.0°
C11C08C06O121.2°0.0°
C11C08C07H10179.6°179.9°
C08C11C09H11179.3°180.0°
C06C08C11C09179.4°179.9°
C08C06O13O12177.1°180.0°
C06C08C11H90.6°0.0°
C06C08C07H101.0°0.1°
C08C06O12H13176.8°180.0°
O13C06O12H130.0°0.0°
H1C18C17H348.6°180.0°
H1C18C17H4167.8°60.0°
H1C18C16H551.5°60.0°
H1C18C16H6170.8°180.0°
H2C18C17H370.4°60.1°
H2C18C17H448.8°59.9°
H2C18C16H567.4°60.0°
H2C18C16H651.9°60.0°
H3C17C14H1466.9°60.0°
H3C17C14H1552.4°180.0°
H4C17C14H1452.2°60.0°
H4C17C14H15171.6°60.0°
H5C16C15H762.0°60.0°
H5C16C15H858.0°60.0°
H6C16C15H757.3°180.0°
H6C16C15H8177.3°59.9°
H7C15C10H1266.6°180.0°
H8C15C10H12173.4°60.1°
H9C11C09H110.7°0.1°
H12C10C14H1464.7°60.0°
H12C10C14H15176.0°180.0°

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PDB entries from 2024-07-17

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