Q3D
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C17 | C18 | sing | 1.53Å | 1.49Å | |
C17 | C16 | sing | 1.53Å | 1.51Å | |
C18 | C16 | sing | 1.53Å | 1.51Å | |
C16 | C15 | sing | 1.51Å | 1.51Å | |
C15 | C14 | doub | 1.38Å | 1.39Å | Aromatic |
C15 | N2 | sing | 1.32Å | 1.34Å | Aromatic |
C14 | C13 | sing | 1.38Å | 1.39Å | Aromatic |
N2 | C19 | doub | 1.32Å | 1.34Å | Aromatic |
C13 | C12 | doub | 1.40Å | 1.40Å | Aromatic |
C19 | C12 | sing | 1.39Å | 1.39Å | Aromatic |
C12 | C11 | sing | 1.48Å | 1.49Å | |
O2 | S | doub | 1.42Å | 1.43Å | |
C23 | S | sing | 1.81Å | 1.75Å | |
S | O1 | doub | 1.42Å | 1.43Å | |
S | C22 | sing | 1.76Å | 1.79Å | |
C11 | C10 | doub | 1.38Å | 1.37Å | Aromatic |
C11 | C20 | sing | 1.47Å | 1.45Å | Aromatic |
C10 | N1 | sing | 1.34Å | 1.37Å | Aromatic |
C20 | C22 | doub | 1.36Å | 1.39Å | Aromatic |
C20 | N3 | sing | 1.38Å | 1.41Å | Aromatic |
C22 | N4 | sing | 1.34Å | 1.39Å | Aromatic |
C6 | C5 | sing | 1.55Å | 1.51Å | |
C6 | O | sing | 1.44Å | 1.45Å | |
N1 | C9 | doub | 1.31Å | 1.33Å | Aromatic |
C5 | C4 | sing | 1.52Å | 1.51Å | |
O | C3 | sing | 1.36Å | 1.38Å | |
N3 | C9 | sing | 1.37Å | 1.41Å | Aromatic |
N3 | C21 | sing | 1.36Å | 1.36Å | Aromatic |
N4 | C21 | doub | 1.31Å | 1.30Å | Aromatic |
C9 | N | sing | 1.37Å | 1.36Å | |
C3 | C4 | doub | 1.39Å | 1.39Å | Aromatic |
C3 | C2 | sing | 1.39Å | 1.38Å | Aromatic |
C4 | C7 | sing | 1.38Å | 1.41Å | Aromatic |
N | C8 | sing | 1.46Å | 1.46Å | |
C2 | C1 | doub | 1.38Å | 1.39Å | Aromatic |
C7 | C8 | sing | 1.51Å | 1.51Å | |
C7 | C | doub | 1.38Å | 1.38Å | Aromatic |
C1 | C | sing | 1.38Å | 1.38Å | Aromatic |
C | F | sing | 1.35Å | 1.35Å | |
C2 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H3 | sing | 1.09Å | 1.10Å | |
C5 | H2 | sing | 1.09Å | 1.10Å | |
C23 | H20 | sing | 1.09Å | 1.10Å | |
C23 | H19 | sing | 1.09Å | 1.10Å | |
C23 | H21 | sing | 1.09Å | 1.10Å | |
C19 | H17 | sing | 1.08Å | 1.08Å | |
C16 | H12 | sing | 1.09Å | 1.10Å | |
C18 | H15 | sing | 1.09Å | 1.10Å | |
C18 | H16 | sing | 1.09Å | 1.10Å | |
C17 | H13 | sing | 1.09Å | 1.10Å | |
C17 | H14 | sing | 1.09Å | 1.10Å | |
C14 | H11 | sing | 1.08Å | 1.08Å | |
C13 | H10 | sing | 1.08Å | 1.08Å | |
C10 | H9 | sing | 1.08Å | 1.08Å | |
C21 | H18 | sing | 1.08Å | 1.08Å | |
N | H8 | sing | 0.97Å | 1.00Å | |
C8 | H6 | sing | 1.09Å | 1.10Å | |
C8 | H7 | sing | 1.09Å | 1.10Å | |
C6 | H4 | sing | 1.09Å | 1.10Å | |
C6 | H5 | sing | 1.09Å | 1.10Å | |
C1 | H | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C18 | C17 | C16 | 60.5° | 60.0° |
C17 | C18 | C16 | 60.5° | 60.0° |
C17 | C18 | H15 | 119.9° | 117.5° |
C17 | C18 | H16 | 119.9° | 117.5° |
C18 | C17 | H13 | 119.9° | 117.5° |
C18 | C17 | H14 | 119.9° | 117.5° |
C17 | C16 | C18 | 59.0° | 60.0° |
C17 | C16 | C15 | 119.0° | 117.5° |
C17 | C16 | H12 | 116.6° | 117.5° |
C16 | C17 | H13 | 119.9° | 117.5° |
C16 | C17 | H14 | 119.9° | 117.5° |
C18 | C16 | C15 | 116.9° | 117.6° |
C18 | C16 | H12 | 116.5° | 117.5° |
C16 | C18 | H15 | 119.9° | 117.4° |
C16 | C18 | H16 | 119.9° | 117.5° |
C16 | C15 | C14 | 125.0° | 119.5° |
C16 | C15 | N2 | 112.2° | 119.5° |
C15 | C16 | H12 | 116.5° | 115.5° |
C14 | C15 | N2 | 122.0° | 121.1° |
C15 | C14 | C13 | 118.7° | 119.3° |
C15 | C14 | H11 | 120.6° | 120.3° |
C15 | N2 | C19 | 118.4° | 121.8° |
C14 | C13 | C12 | 119.8° | 118.3° |
C13 | C14 | H11 | 120.7° | 120.4° |
C14 | C13 | H10 | 120.1° | 120.9° |
N2 | C19 | C12 | 123.8° | 120.6° |
N2 | C19 | H17 | 118.1° | 119.7° |
C13 | C12 | C19 | 117.0° | 118.9° |
C13 | C12 | C11 | 122.0° | 120.5° |
C12 | C13 | H10 | 120.1° | 120.8° |
C19 | C12 | C11 | 120.7° | 120.6° |
C12 | C19 | H17 | 118.1° | 119.7° |
C12 | C11 | C10 | 120.2° | 121.2° |
C12 | C11 | C20 | 120.7° | 121.2° |
O2 | S | C23 | 108.7° | 110.6° |
O2 | S | O1 | 118.0° | 121.0° |
O2 | S | C22 | 108.0° | 104.3° |
C23 | S | O1 | 108.3° | 110.5° |
C23 | S | C22 | 105.2° | 104.4° |
S | C23 | H20 | 109.5° | 109.5° |
S | C23 | H19 | 109.5° | 109.5° |
S | C23 | H21 | 109.5° | 109.5° |
O1 | S | C22 | 107.9° | 104.3° |
S | C22 | C20 | 136.6° | 126.1° |
S | C22 | N4 | 114.1° | 126.1° |
C10 | C11 | C20 | 119.1° | 117.6° |
C11 | C10 | N1 | 122.4° | 120.2° |
C11 | C10 | H9 | 118.8° | 119.9° |
C11 | C20 | C22 | 138.8° | 135.0° |
C11 | C20 | N3 | 116.2° | 118.2° |
C10 | N1 | C9 | 120.5° | 123.0° |
N1 | C10 | H9 | 118.8° | 119.9° |
C22 | C20 | N3 | 104.8° | 106.8° |
C20 | C22 | N4 | 109.1° | 107.8° |
C20 | N3 | C9 | 121.2° | 119.2° |
C20 | N3 | C21 | 107.2° | 106.6° |
C22 | N4 | C21 | 107.6° | 109.9° |
C5 | C6 | O | 107.8° | 102.8° |
C6 | C5 | C4 | 103.0° | 102.0° |
C6 | C5 | H3 | 111.0° | 111.0° |
C6 | C5 | H2 | 111.1° | 110.9° |
C5 | C6 | H4 | 109.9° | 110.7° |
C5 | C6 | H5 | 109.9° | 110.8° |
C6 | O | C3 | 108.6° | 109.2° |
O | C6 | H4 | 109.9° | 110.8° |
O | C6 | H5 | 109.9° | 110.8° |
N1 | C9 | N3 | 120.7° | 121.8° |
N1 | C9 | N | 119.1° | 119.0° |
C5 | C4 | C3 | 108.7° | 107.0° |
C5 | C4 | C7 | 131.8° | 132.2° |
C4 | C5 | H3 | 111.1° | 110.9° |
C4 | C5 | H2 | 111.1° | 110.9° |
O | C3 | C4 | 111.9° | 111.2° |
O | C3 | C2 | 125.9° | 129.9° |
C9 | N3 | C21 | 131.5° | 134.2° |
N3 | C9 | N | 120.2° | 119.1° |
N3 | C21 | N4 | 111.3° | 108.9° |
N3 | C21 | H18 | 124.4° | 125.5° |
N4 | C21 | H18 | 124.4° | 125.5° |
C9 | N | C8 | 123.1° | 120.0° |
C9 | N | H8 | 105.9° | 120.0° |
C4 | C3 | C2 | 122.2° | 118.9° |
C3 | C4 | C7 | 119.5° | 120.8° |
C3 | C2 | C1 | 118.6° | 120.3° |
C3 | C2 | H1 | 120.7° | 119.9° |
C4 | C7 | C8 | 119.9° | 120.0° |
C4 | C7 | C | 116.6° | 120.0° |
N | C8 | C7 | 111.8° | 109.5° |
C8 | N | H8 | 106.0° | 120.0° |
N | C8 | H6 | 108.9° | 109.5° |
N | C8 | H7 | 108.9° | 109.5° |
C2 | C1 | C | 119.1° | 120.3° |
C1 | C2 | H1 | 120.7° | 119.8° |
C2 | C1 | H | 120.5° | 119.9° |
C8 | C7 | C | 123.4° | 120.1° |
C7 | C8 | H6 | 108.9° | 109.4° |
C7 | C8 | H7 | 108.9° | 109.5° |
C7 | C | C1 | 124.0° | 119.8° |
C7 | C | F | 117.6° | 120.1° |
C1 | C | F | 118.4° | 120.1° |
C | C1 | H | 120.4° | 119.9° |
H3 | C5 | H2 | 109.5° | 110.8° |
H20 | C23 | H19 | 109.5° | 109.5° |
H20 | C23 | H21 | 109.4° | 109.5° |
H19 | C23 | H21 | 109.5° | 109.5° |
H15 | C18 | H16 | 109.5° | 115.6° |
H13 | C17 | H14 | 109.5° | 115.5° |
H6 | C8 | H7 | 109.5° | 109.5° |
H4 | C6 | H5 | 109.5° | 110.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C18 | C17 | C16 | H13 | 109.6° | 107.5° |
C18 | C17 | C16 | H14 | 109.6° | 107.5° |
C17 | C18 | C16 | H15 | 109.6° | 107.5° |
C17 | C18 | C16 | H16 | 109.6° | 107.5° |
C18 | C17 | C16 | C15 | 105.7° | 107.5° |
C18 | C17 | C16 | H12 | 106.4° | 107.5° |
C17 | C18 | H15 | H16 | 144.4° | 145.8° |
C18 | C17 | H13 | H14 | 144.5° | 145.7° |
C17 | C16 | C15 | H12 | 147.9° | 145.6° |
C17 | C16 | C15 | C14 | 33.2° | 16.2° |
C17 | C16 | C15 | N2 | 156.7° | 163.5° |
C16 | C17 | H13 | H14 | 144.5° | 145.7° |
C18 | C16 | C15 | H12 | 144.3° | 145.7° |
C18 | C16 | C15 | C14 | 34.5° | 84.9° |
C18 | C16 | C15 | N2 | 135.6° | 94.8° |
C16 | C18 | H15 | H16 | 144.5° | 145.7° |
C16 | C15 | C14 | N2 | 169.1° | 179.7° |
C16 | C15 | C14 | C13 | 165.1° | 180.0° |
C16 | C15 | N2 | C19 | 165.8° | 179.7° |
C15 | C16 | C18 | H15 | 141.2° | 0.0° |
C15 | C16 | C18 | H16 | 0.4° | 145.0° |
C15 | C16 | C17 | H13 | 3.9° | 145.0° |
C15 | C16 | C17 | H14 | 144.7° | 0.0° |
C16 | C15 | C14 | H11 | 14.9° | 0.2° |
C15 | C14 | C13 | H11 | 180.0° | 179.7° |
C14 | C15 | N2 | C19 | 4.7° | 0.0° |
C15 | C14 | C13 | C12 | 0.3° | 0.6° |
C14 | C15 | C16 | H12 | 178.8° | 129.4° |
C15 | C14 | C13 | H10 | 179.7° | 180.0° |
N2 | C15 | C14 | C13 | 4.0° | 0.3° |
C15 | N2 | C19 | C12 | 1.7° | 0.0° |
C15 | N2 | C19 | H17 | 178.3° | 180.0° |
N2 | C15 | C16 | H12 | 8.8° | 50.9° |
N2 | C15 | C14 | H11 | 176.0° | 179.9° |
C14 | C13 | C12 | H10 | 180.0° | 179.4° |
C14 | C13 | C12 | C19 | 2.5° | 0.6° |
C14 | C13 | C12 | C11 | 171.5° | 179.7° |
N2 | C19 | C12 | C13 | 1.9° | 0.3° |
N2 | C19 | C12 | H17 | 180.0° | 179.9° |
N2 | C19 | C12 | C11 | 172.1° | 180.0° |
C13 | C12 | C19 | C11 | 174.0° | 179.7° |
C13 | C12 | C11 | C10 | 55.5° | 75.7° |
C13 | C12 | C11 | C20 | 124.3° | 104.3° |
C13 | C12 | C19 | H17 | 178.1° | 179.8° |
C12 | C13 | C14 | H11 | 179.7° | 179.7° |
C19 | C12 | C11 | C10 | 118.2° | 104.6° |
C19 | C12 | C11 | C20 | 62.0° | 75.4° |
C19 | C12 | C13 | H10 | 177.6° | 180.0° |
C12 | C11 | C10 | C20 | 179.8° | 180.0° |
C12 | C11 | C10 | N1 | 179.9° | 180.0° |
C12 | C11 | C20 | C22 | 4.7° | 0.1° |
C12 | C11 | C20 | N3 | 179.8° | 180.0° |
C11 | C12 | C19 | H17 | 7.9° | 0.1° |
C11 | C12 | C13 | H10 | 8.5° | 0.3° |
C12 | C11 | C10 | H9 | 0.1° | 0.0° |
O2 | S | C23 | O1 | 129.3° | 136.7° |
O2 | S | C23 | C22 | 115.5° | 111.6° |
O2 | S | O1 | C22 | 122.7° | 116.7° |
O2 | S | C22 | C20 | 34.2° | 32.3° |
O2 | S | C22 | N4 | 139.0° | 147.5° |
O2 | S | C23 | H20 | 180.0° | 67.1° |
O2 | S | C23 | H19 | 60.0° | 172.9° |
O2 | S | C23 | H21 | 60.0° | 52.9° |
C23 | S | O1 | C22 | 113.4° | 111.7° |
C23 | S | C22 | C20 | 81.7° | 83.7° |
C23 | S | C22 | N4 | 105.1° | 96.4° |
S | C23 | H20 | H19 | 120.0° | 120.0° |
S | C23 | H20 | H21 | 120.0° | 120.0° |
S | C23 | H19 | H21 | 120.0° | 120.0° |
O1 | S | C22 | C20 | 162.8° | 160.2° |
O1 | S | C22 | N4 | 10.4° | 19.7° |
O1 | S | C23 | H20 | 50.7° | 156.1° |
O1 | S | C23 | H19 | 69.3° | 36.1° |
O1 | S | C23 | H21 | 170.7° | 83.9° |
S | C22 | C20 | C11 | 3.1° | 0.1° |
S | C22 | C20 | N4 | 173.4° | 179.9° |
S | C22 | C20 | N3 | 172.4° | 180.0° |
S | C22 | N4 | C21 | 174.3° | 180.0° |
C22 | S | C23 | H20 | 64.5° | 44.5° |
C22 | S | C23 | H19 | 175.5° | 75.5° |
C22 | S | C23 | H21 | 55.5° | 164.5° |
C11 | C10 | N1 | H9 | 180.0° | 179.9° |
C10 | C11 | C20 | C22 | 175.1° | 179.9° |
C10 | C11 | C20 | N3 | 0.0° | 0.0° |
C11 | C10 | N1 | C9 | 1.0° | 0.1° |
C20 | C11 | C10 | N1 | 0.3° | 0.0° |
C11 | C20 | C22 | N3 | 175.5° | 179.9° |
C11 | C20 | C22 | N4 | 176.5° | 180.0° |
C11 | C20 | N3 | C9 | 0.4° | 0.0° |
C11 | C20 | N3 | C21 | 177.7° | 180.0° |
C20 | C11 | C10 | H9 | 179.7° | 180.0° |
C10 | N1 | C9 | N3 | 1.4° | 0.0° |
C10 | N1 | C9 | N | 176.5° | 180.0° |
C22 | C20 | N3 | C9 | 176.3° | 180.0° |
C22 | C20 | N3 | C21 | 1.0° | 0.1° |
C20 | C22 | N4 | C21 | 0.7° | 0.1° |
N3 | C20 | C22 | N4 | 1.1° | 0.1° |
C20 | N3 | C9 | N1 | 1.1° | 0.0° |
C20 | N3 | C9 | C21 | 176.6° | 180.0° |
C20 | N3 | C21 | N4 | 0.6° | 0.0° |
C20 | N3 | C9 | N | 176.8° | 179.9° |
C20 | N3 | C21 | H18 | 179.4° | 179.9° |
C22 | N4 | C21 | N3 | 0.1° | 0.0° |
C22 | N4 | C21 | H18 | 179.9° | 180.0° |
C5 | C6 | O | H4 | 119.7° | 118.3° |
C5 | C6 | O | H5 | 119.8° | 118.4° |
C6 | C5 | C4 | H3 | 118.9° | 118.2° |
C6 | C5 | C4 | H2 | 118.9° | 118.2° |
C5 | C6 | O | C3 | 0.6° | 27.7° |
C6 | C5 | C4 | C3 | 0.0° | 15.3° |
C6 | C5 | C4 | C7 | 178.4° | 164.5° |
C6 | C5 | H3 | H2 | 123.0° | 123.7° |
C5 | C6 | H4 | H5 | 120.8° | 123.3° |
O | C6 | C5 | C4 | 0.3° | 25.3° |
C6 | O | C3 | C4 | 0.6° | 19.0° |
C6 | O | C3 | C2 | 179.9° | 161.5° |
O | C6 | C5 | H3 | 119.3° | 143.5° |
O | C6 | C5 | H2 | 118.7° | 92.9° |
O | C6 | H4 | H5 | 120.8° | 123.4° |
N1 | C9 | N3 | N | 177.8° | 179.9° |
N1 | C9 | N3 | C21 | 177.6° | 180.0° |
N1 | C9 | N | C8 | 3.1° | 0.1° |
C9 | N1 | C10 | H9 | 179.0° | 180.0° |
N1 | C9 | N | H8 | 118.7° | 180.0° |
C5 | C4 | C3 | O | 0.4° | 1.1° |
C5 | C4 | C3 | C7 | 178.6° | 179.9° |
C5 | C4 | C3 | C2 | 179.7° | 179.4° |
C5 | C4 | C7 | C8 | 3.2° | 0.7° |
C5 | C4 | C7 | C | 179.4° | 179.7° |
C4 | C5 | H3 | H2 | 123.1° | 123.7° |
C4 | C5 | C6 | H4 | 120.0° | 93.1° |
C4 | C5 | C6 | H5 | 119.4° | 143.6° |
O | C3 | C4 | C2 | 179.3° | 179.5° |
O | C3 | C4 | C7 | 178.2° | 179.0° |
O | C3 | C2 | C1 | 178.9° | 179.1° |
O | C3 | C2 | H1 | 1.1° | 1.1° |
C3 | O | C6 | H4 | 120.3° | 90.6° |
C3 | O | C6 | H5 | 119.2° | 146.1° |
C9 | N3 | C21 | N4 | 176.3° | 180.0° |
N3 | C9 | N | C8 | 179.0° | 180.0° |
C9 | N3 | C21 | H18 | 3.6° | 0.0° |
N3 | C9 | N | H8 | 59.2° | 0.1° |
N3 | C21 | N4 | H18 | 180.0° | 180.0° |
C21 | N3 | C9 | N | 0.2° | 0.0° |
C9 | N | C8 | H8 | 121.8° | 179.9° |
C9 | N | C8 | C7 | 77.0° | 179.9° |
C9 | N | C8 | H6 | 162.7° | 60.0° |
C9 | N | C8 | H7 | 43.4° | 60.1° |
C4 | C3 | C2 | C1 | 0.3° | 0.3° |
C3 | C4 | C7 | C8 | 175.0° | 179.4° |
C3 | C4 | C7 | C | 1.2° | 0.1° |
C4 | C3 | C2 | H1 | 179.7° | 179.5° |
C3 | C4 | C5 | H3 | 118.9° | 133.6° |
C3 | C4 | C5 | H2 | 119.0° | 102.8° |
C2 | C3 | C4 | C7 | 1.1° | 0.5° |
C3 | C2 | C1 | H1 | 180.0° | 179.8° |
C3 | C2 | C1 | C | 0.4° | 0.2° |
C3 | C2 | C1 | H | 179.6° | 179.8° |
C4 | C7 | C8 | N | 113.5° | 89.5° |
C4 | C7 | C8 | C | 175.9° | 179.5° |
C4 | C7 | C | C1 | 0.5° | 0.5° |
C4 | C7 | C | F | 179.6° | 179.5° |
C7 | C4 | C5 | H3 | 62.7° | 46.2° |
C7 | C4 | C5 | H2 | 59.4° | 77.3° |
C4 | C7 | C8 | H6 | 126.2° | 150.5° |
C4 | C7 | C8 | H7 | 6.9° | 30.5° |
N | C8 | C7 | H6 | 120.3° | 120.0° |
N | C8 | C7 | H7 | 120.3° | 120.0° |
N | C8 | C7 | C | 70.6° | 90.0° |
N | C8 | H6 | H7 | 119.0° | 120.0° |
C2 | C1 | C | C7 | 0.3° | 0.7° |
C2 | C1 | C | H | 180.0° | 180.0° |
C2 | C1 | C | F | 179.6° | 179.4° |
C8 | C7 | C | C1 | 175.5° | 180.0° |
C8 | C7 | C | F | 4.3° | 0.0° |
C7 | C8 | N | H8 | 44.9° | 0.0° |
C7 | C8 | H6 | H7 | 118.9° | 120.0° |
C7 | C | C1 | F | 179.9° | 180.0° |
C | C7 | C8 | H6 | 49.7° | 30.0° |
C | C7 | C8 | H7 | 169.1° | 150.0° |
C7 | C | C1 | H | 179.7° | 179.3° |
C | C1 | C2 | H1 | 179.6° | 180.0° |
F | C | C1 | H | 0.4° | 0.7° |
H1 | C2 | C1 | H | 0.4° | 0.0° |
H3 | C5 | C6 | H4 | 121.0° | 25.1° |
H3 | C5 | C6 | H5 | 0.5° | 98.2° |
H2 | C5 | C6 | H4 | 1.1° | 148.8° |
H2 | C5 | C6 | H5 | 121.6° | 25.5° |
H20 | C23 | H19 | H21 | 120.0° | 120.0° |
H12 | C16 | C18 | H15 | 3.1° | 145.0° |
H12 | C16 | C18 | H16 | 143.9° | 0.0° |
H12 | C16 | C17 | H13 | 144.0° | 0.0° |
H12 | C16 | C17 | H14 | 3.2° | 145.0° |
H15 | C18 | C17 | H13 | 140.8° | 145.1° |
H15 | C18 | C17 | H14 | 0.0° | 0.1° |
H16 | C18 | C17 | H13 | 0.0° | 0.0° |
H16 | C18 | C17 | H14 | 140.8° | 145.0° |
H11 | C14 | C13 | H10 | 0.4° | 0.3° |
H8 | N | C8 | H6 | 75.5° | 119.9° |
H8 | N | C8 | H7 | 165.2° | 120.0° |