Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

PVZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C02C01sing1.53Å1.53Å
C01H01sing1.09Å1.10Å
C01H01Asing1.09Å1.10Å
C01H01Bsing1.09Å1.10Å
C03C02sing1.53Å1.54Å
C02H02sing1.09Å1.10Å
C02H02Asing1.09Å1.10Å
C04C03sing1.53Å1.55Å
C03H03sing1.09Å1.10Å
C03H03Asing1.09Å1.10Å
C04C05sing1.53Å1.53Å
C04H04sing1.09Å1.10Å
C04H04Asing1.09Å1.10Å
C05C06sing1.53Å1.55Å
C05H05sing1.09Å1.10Å
C05H05Asing1.09Å1.10Å
C07C06sing1.53Å1.55Å
C06H06sing1.09Å1.10Å
C06H06Asing1.09Å1.10Å
C07C08sing1.53Å1.55Å
C07H07sing1.09Å1.10Å
C07H07Asing1.09Å1.10Å
C09C08sing1.53Å1.55Å
C08H08sing1.09Å1.10Å
C08H08Asing1.09Å1.10Å
C09N10sing1.47Å1.47Å
C09H09sing1.09Å1.10Å
C09H09Asing1.09Å1.10Å
N10C14sing1.35Å1.36ÅAromatic
N10C11sing1.37Å1.33ÅAromatic
C11C12doub1.35Å1.38ÅAromatic
C11H11sing1.08Å1.08Å
N13C12sing1.34Å1.34ÅAromatic
C12H12sing1.08Å1.08Å
C14N13doub1.31Å1.36ÅAromatic
N13C15sing1.46Å1.45Å
C14H14sing1.08Å1.08Å
C16C15sing1.53Å1.51Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
P18C16sing1.82Å1.84Å
C16O17sing1.43Å1.41Å
C16P22sing1.82Å1.81Å
O17HO17sing0.97Å0.95Å
O19P18doub1.48Å1.53Å
O21P18sing1.61Å1.54Å
O20P18sing1.61Å1.53Å
O20HO20sing0.97Å0.95Å
O21HO21sing0.97Å0.95Å
O24P22doub1.48Å1.52Å
P22O23sing1.61Å1.52Å
P22O25sing1.61Å1.50Å
O23HO23sing0.97Å0.95Å
O25HO25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C02C01H01109.5°109.5°
C02C01H01A109.5°109.5°
C02C01H01B109.5°109.5°
C01C02C03113.5°109.4°
C01C02H02108.4°109.5°
C01C02H02A108.4°109.5°
H01C01H01A109.5°109.4°
H01C01H01B109.5°109.5°
H01AC01H01B109.5°109.4°
C03C02H02108.5°109.5°
C03C02H02A108.5°109.4°
C02C03C04112.8°109.5°
C02C03H03108.7°109.5°
C02C03H03A108.7°109.4°
H02C02H02A109.5°109.5°
C04C03H03108.6°109.5°
C04C03H03A108.6°109.5°
C03C04C05111.6°109.5°
C03C04H04108.9°109.5°
C03C04H04A108.9°109.4°
H03C03H03A109.5°109.5°
C05C04H04109.0°109.5°
C05C04H04A108.9°109.5°
C04C05C06115.0°109.4°
C04C05H05108.1°109.4°
C04C05H05A108.1°109.5°
H04C04H04A109.5°109.5°
C06C05H05108.1°109.5°
C06C05H05A108.1°109.5°
C05C06C07112.7°109.4°
C05C06H06108.6°109.5°
C05C06H06A108.6°109.5°
H05C05H05A109.4°109.5°
C07C06H06108.7°109.5°
C07C06H06A108.6°109.5°
C06C07C08117.2°109.4°
C06C07H07107.5°109.5°
C06C07H07A107.5°109.5°
H06C06H06A109.5°109.5°
C08C07H07107.5°109.5°
C08C07H07A107.5°109.5°
C07C08C09111.4°109.4°
C07C08H08109.0°109.5°
C07C08H08A109.0°109.5°
H07C07H07A109.5°109.5°
C09C08H08109.0°109.5°
C09C08H08A109.0°109.4°
C08C09N10110.3°109.4°
C08C09H09109.3°109.5°
C08C09H09A109.3°109.4°
H08C08H08A109.5°109.5°
N10C09H09109.2°109.5°
N10C09H09A109.3°109.5°
C09N10C14124.8°126.4°
C09N10C11127.1°126.4°
H09C09H09A109.5°109.5°
C14N10C11108.2°107.2°
N10C14N13108.1°108.7°
N10C14H14126.0°125.7°
N10C11C12108.3°106.8°
N10C11H11125.9°126.6°
C12C11H11125.8°126.6°
C11C12N13107.0°108.0°
C11C12H12126.5°126.0°
N13C12H12126.5°126.0°
C12N13C14108.4°109.2°
C12N13C15129.7°125.4°
C14N13C15121.8°125.4°
N13C14H14125.9°125.6°
N13C15C16113.4°109.5°
N13C15H15108.5°109.5°
N13C15H15A108.5°109.5°
C16C15H15108.5°109.4°
C16C15H15A108.5°109.4°
C15C16P18119.0°109.5°
C15C16O17106.8°109.5°
C15C16P22109.0°109.4°
H15C15H15A109.5°109.5°
P18C16O17106.0°109.5°
P18C16P22108.2°109.5°
C16P18O19112.1°109.5°
C16P18O21110.0°109.5°
C16P18O20100.8°109.5°
O17C16P22107.3°109.5°
C16O17HO17109.5°114.0°
C16P22O24116.4°109.5°
C16P22O23110.6°109.5°
C16P22O25102.9°109.5°
O19P18O21112.5°109.5°
O19P18O20110.4°109.5°
O21P18O20110.5°109.5°
P18O21HO21109.5°114.0°
P18O20HO20109.5°114.0°
O24P22O23109.2°109.4°
O24P22O25110.6°109.5°
O23P22O25106.6°109.5°
P22O23HO23109.5°114.0°
P22O25HO25109.5°114.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C02C01H01H01A120.0°120.1°
C02C01H01H01B120.0°120.0°
C02C01H01AH01B120.0°120.0°
C01C02C03H02120.6°120.0°
C01C02C03H02A120.6°120.0°
C01C02H02H02A118.1°120.0°
C01C02C03C04164.4°180.0°
C01C02C03H0343.9°60.0°
C01C02C03H03A75.2°60.0°
H01C01H01AH01B120.0°120.0°
H01C01C02C03180.0°60.0°
H01C01C02H0259.4°60.0°
H01C01C02H02A59.4°180.0°
H01AC01C02C0360.0°60.0°
H01AC01C02H0260.6°180.0°
H01AC01C02H02A179.4°59.9°
H01BC01C02C0360.0°179.9°
H01BC01C02H02179.4°60.0°
H01BC01C02H02A60.6°60.0°
C03C02H02H02A118.2°120.0°
C02C03C04H03120.5°120.0°
C02C03C04H03A120.5°119.9°
C02C03H03H03A118.5°120.0°
C02C03C04C0589.5°180.0°
C02C03C04H04150.2°60.0°
C02C03C04H04A30.8°60.0°
H02C02C03C0475.0°60.0°
H02C02C03H03164.5°180.0°
H02C02C03H03A45.5°60.0°
H02AC02C03C0443.8°60.0°
H02AC02C03H0376.7°60.0°
H02AC02C03H03A164.3°180.0°
C04C03H03H03A118.4°120.0°
C03C04C05H04120.3°120.0°
C03C04C05H04A120.3°120.0°
C03C04H04H04A119.0°119.9°
C03C04C05C0644.9°180.0°
C03C04C05H0576.0°60.0°
C03C04C05H05A165.7°60.0°
H03C03C04C0531.0°60.0°
H03C03C04H0489.3°180.0°
H03C03C04H04A151.3°60.0°
H03AC03C04C05150.0°60.0°
H03AC03C04H0429.7°60.0°
H03AC03C04H04A89.7°179.9°
C05C04H04H04A119.1°120.1°
C04C05C06H05120.8°119.9°
C04C05C06H05A120.8°120.0°
C04C05H05H05A117.5°120.0°
C04C05C06C0797.8°180.0°
C04C05C06H0622.7°60.0°
C04C05C06H06A141.7°60.0°
H04C04C05C06165.2°60.0°
H04C04C05H0544.3°180.0°
H04C04C05H05A74.0°60.0°
H04AC04C05C0675.4°60.0°
H04AC04C05H05163.7°60.0°
H04AC04C05H05A45.4°180.0°
C06C05H05H05A117.5°120.1°
C05C06C07H06120.5°120.0°
C05C06C07H06A120.5°120.0°
C05C06H06H06A118.5°120.0°
C05C06C07C08119.8°180.0°
C05C06C07H071.3°60.0°
C05C06C07H07A119.1°60.0°
H05C05C06C07141.4°60.1°
H05C05C06H0698.1°179.9°
H05C05C06H06A20.9°59.9°
H05AC05C06C0723.0°60.0°
H05AC05C06H06143.5°60.0°
H05AC05C06H06A97.5°180.0°
C07C06H06H06A118.5°120.0°
C06C07C08H07121.1°120.0°
C06C07C08H07A121.1°120.0°
C06C07H07H07A116.5°120.0°
C06C07C08C09160.8°180.0°
C06C07C08H0840.5°60.1°
C06C07C08H08A78.9°60.0°
H06C06C07C08119.7°60.0°
H06C06C07H07119.2°180.0°
H06C06C07H07A1.4°60.0°
H06AC06C07C080.7°60.0°
H06AC06C07H07121.8°60.0°
H06AC06C07H07A120.4°180.0°
C08C07H07H07A116.4°120.0°
C07C08C09H08120.3°120.0°
C07C08C09H08A120.3°120.0°
C07C08H08H08A119.1°120.1°
C07C08C09N10172.1°180.0°
C07C08C09H0952.0°60.0°
C07C08C09H09A67.7°60.0°
H07C07C08C0978.0°60.0°
H07C07C08H08161.7°179.9°
H07C07C08H08A42.2°60.0°
H07AC07C08C0939.7°60.0°
H07AC07C08H0880.6°60.0°
H07AC07C08H08A160.0°180.0°
C09C08H08H08A119.1°120.0°
C08C09N10H09120.1°120.0°
C08C09N10H09A120.1°119.9°
C08C09H09H09A119.6°120.0°
C08C09N10C1432.6°90.1°
C08C09N10C11147.5°89.7°
H08C08C09N1067.6°60.0°
H08C08C09H09172.3°180.0°
H08C08C09H09A52.6°59.9°
H08AC08C09N1051.8°60.1°
H08AC08C09H0968.3°60.0°
H08AC08C09H09A172.0°180.0°
N10C09H09H09A119.6°120.0°
C09N10C14C11179.9°179.9°
C09N10C11C12179.0°180.0°
C09N10C11H111.0°0.0°
C09N10C14N13179.3°179.9°
C09N10C14H140.7°0.1°
H09C09N10C1487.5°29.9°
H09C09N10C1192.4°150.2°
H09AC09N10C14152.7°150.0°
H09AC09N10C1127.3°30.2°
C14N10C11C121.0°0.1°
C14N10C11H11178.9°179.8°
N10C14N13C120.2°0.3°
N10C14N13H14180.0°180.0°
N10C14N13C15179.9°179.9°
N10C11C12H11180.0°180.0°
N10C11C12N130.9°0.0°
N10C11C12H12179.1°180.0°
C11N10C14N130.8°0.3°
C11N10C14H14179.2°179.8°
C11C12N13H12180.0°180.0°
C11C12N13C140.4°0.2°
C11C12N13C15179.2°180.0°
H11C11C12N13179.1°180.0°
H11C11C12H120.9°0.0°
C12N13C14C15179.7°179.8°
C12N13C14H14179.8°179.7°
C12N13C15C1662.3°97.2°
C12N13C15H1558.3°142.9°
C12N13C15H15A177.1°22.8°
H12C12N13C14179.6°179.8°
H12C12N13C150.8°0.0°
C14N13C15C16117.3°82.6°
C14N13C15H15122.2°37.4°
C14N13C15H15A3.3°157.4°
C15N13C14H140.2°0.1°
N13C15C16H15120.5°120.0°
N13C15C16H15A120.6°120.0°
N13C15H15H15A118.2°120.1°
N13C15C16P1856.6°174.4°
N13C15C16O1763.2°54.4°
N13C15C16P22178.8°65.6°
C16C15H15H15A118.2°120.0°
C15C16P18O17120.2°120.0°
C15C16P18P22125.0°120.0°
C15C16O17P22116.8°120.0°
C15C16O17HO17180.0°60.1°
C15C16P18O1972.5°178.0°
C15C16P18O2153.5°62.0°
C15C16P18O20170.1°58.0°
C15C16P22O2493.7°60.0°
C15C16P22O23141.0°180.0°
C15C16P22O2527.5°60.0°
H15C15C16P18177.1°54.4°
H15C15C16O1757.4°65.6°
H15C15C16P2258.3°174.4°
H15AC15C16P1864.0°65.6°
H15AC15C16O17176.3°174.4°
H15AC15C16P2260.6°54.4°
P18C16O17P22115.4°120.0°
P18C16O17HO1752.1°180.0°
C16P18O19O21124.6°120.0°
C16P18O19O20111.5°120.0°
C16P18O21O20110.4°120.0°
C16P18O20HO20118.6°56.5°
C16P18O21HO21125.7°180.0°
P18C16P22O2437.1°60.0°
P18C16P22O2388.2°60.0°
P18C16P22O25158.2°180.0°
O17C16P18O19167.3°58.0°
O17C16P18O2166.7°178.0°
O17C16P18O2050.0°62.0°
O17C16P22O24151.0°180.0°
O17C16P22O2325.7°60.1°
O17C16P22O2587.8°59.9°
P22C16O17HO1763.3°59.9°
P22C16P18O1952.5°62.0°
P22C16P18O21178.5°58.0°
P22C16P18O2064.8°178.0°
C16P22O24O23126.0°120.0°
C16P22O24O25116.9°120.1°
C16P22O23O25111.1°120.0°
C16P22O23HO23129.3°60.0°
C16P22O25HO25125.0°180.0°
O19P18O21O20123.8°120.0°
O19P18O20HO200.0°176.5°
O19P18O21HO210.0°60.0°
O21P18O20HO20125.1°63.5°
O20P18O21HO21123.8°60.0°
O24P22O23O25119.6°120.0°
O24P22O23HO230.0°180.0°
O24P22O25HO250.0°59.9°
O23P22O25HO25118.6°60.0°
O25P22O23HO23119.6°60.0°

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon