PUS
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C2A | C2 | sing | 1.51Å | 1.50Å | |
O | C | doub | 1.21Å | 1.20Å | |
O3 | C3 | sing | 1.36Å | 1.35Å | |
C2 | C3 | sing | 1.39Å | 1.47Å | Aromatic |
C2 | N1 | doub | 1.32Å | 1.38Å | Aromatic |
C3 | C4 | doub | 1.40Å | 1.47Å | Aromatic |
C | OT | sing | 1.34Å | 1.21Å | |
C | CA | sing | 1.51Å | 1.54Å | |
N | CA | sing | 1.47Å | 1.52Å | |
N | C4A | doub | 1.29Å | 1.34Å | |
N1 | C6 | sing | 1.32Å | 1.38Å | Aromatic |
CA | CB | sing | 1.53Å | 1.57Å | |
C4 | C4A | sing | 1.48Å | 1.51Å | |
C4 | C5 | sing | 1.40Å | 1.47Å | Aromatic |
C6 | C5 | doub | 1.38Å | 1.47Å | Aromatic |
C5 | C5A | sing | 1.51Å | 1.52Å | |
CB | OG | sing | 1.43Å | 1.50Å | |
OG | ND | sing | 1.42Å | 1.45Å | |
O4P | C5A | sing | 1.43Å | 1.47Å | |
O4P | P | sing | 1.61Å | 1.49Å | |
O2P | P | doub | 1.48Å | 1.45Å | |
ND | CE | sing | 1.35Å | 1.35Å | |
O1P | P | sing | 1.61Å | 1.45Å | |
P | O3P | sing | 1.61Å | 1.46Å | |
CE | NZ2 | sing | 1.35Å | 1.35Å | |
CE | OZ1 | doub | 1.22Å | 1.19Å | |
CA | H1 | sing | 1.09Å | 1.10Å | |
CB | H2 | sing | 1.09Å | 1.10Å | |
CB | H3 | sing | 1.09Å | 1.10Å | |
ND | H4 | sing | 0.97Å | 1.00Å | |
NZ2 | H5 | sing | 0.97Å | 1.00Å | |
NZ2 | H6 | sing | 0.97Å | 1.00Å | |
OT | H7 | sing | 0.97Å | 0.95Å | |
C6 | H8 | sing | 1.08Å | 1.08Å | |
C2A | H9 | sing | 1.09Å | 1.10Å | |
C2A | H10 | sing | 1.09Å | 1.10Å | |
C2A | H11 | sing | 1.09Å | 1.10Å | |
C4A | H12 | sing | 1.08Å | 1.08Å | |
C5A | H13 | sing | 1.09Å | 1.10Å | |
C5A | H14 | sing | 1.09Å | 1.10Å | |
O3 | H15 | sing | 0.97Å | 0.95Å | |
O1P | H16 | sing | 0.97Å | 0.95Å | |
O3P | H17 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2A | C2 | C3 | 120.4° | 119.6° |
C2A | C2 | N1 | 119.5° | 119.6° |
C2 | C2A | H9 | 109.5° | 109.4° |
C2 | C2A | H10 | 109.5° | 109.5° |
C2 | C2A | H11 | 109.4° | 109.5° |
O | C | OT | 120.3° | 120.0° |
O | C | CA | 119.4° | 120.0° |
O3 | C3 | C2 | 120.2° | 120.5° |
O3 | C3 | C4 | 120.9° | 120.6° |
C3 | O3 | H15 | 109.5° | 114.0° |
C3 | C2 | N1 | 120.1° | 120.8° |
C2 | C3 | C4 | 118.9° | 118.9° |
C2 | N1 | C6 | 123.0° | 122.2° |
C3 | C4 | C4A | 121.1° | 121.0° |
C3 | C4 | C5 | 118.8° | 118.0° |
OT | C | CA | 120.4° | 119.9° |
C | OT | H7 | 109.5° | 116.9° |
C | CA | N | 108.7° | 109.5° |
C | CA | CB | 109.5° | 109.5° |
C | CA | H1 | 109.0° | 109.5° |
CA | N | C4A | 120.7° | 120.0° |
N | CA | CB | 111.6° | 109.4° |
N | CA | H1 | 109.3° | 109.4° |
N | C4A | C4 | 122.0° | 120.0° |
N | C4A | H12 | 119.0° | 120.0° |
N1 | C6 | C5 | 120.9° | 121.1° |
N1 | C6 | H8 | 119.6° | 119.5° |
CA | CB | OG | 110.0° | 109.5° |
CB | CA | H1 | 108.7° | 109.5° |
CA | CB | H2 | 109.3° | 109.4° |
CA | CB | H3 | 109.3° | 109.5° |
C4A | C4 | C5 | 119.8° | 121.0° |
C4 | C4A | H12 | 119.0° | 120.0° |
C4 | C5 | C6 | 118.3° | 119.1° |
C4 | C5 | C5A | 121.5° | 120.4° |
C6 | C5 | C5A | 120.2° | 120.5° |
C5 | C6 | H8 | 119.6° | 119.5° |
C5 | C5A | O4P | 110.7° | 109.5° |
C5 | C5A | H13 | 109.1° | 109.4° |
C5 | C5A | H14 | 109.1° | 109.5° |
CB | OG | ND | 111.1° | 114.0° |
OG | CB | H2 | 109.4° | 109.5° |
OG | CB | H3 | 109.3° | 109.5° |
OG | ND | CE | 119.6° | 120.0° |
OG | ND | H4 | 120.2° | 120.0° |
C5A | O4P | P | 113.0° | 123.0° |
O4P | C5A | H13 | 109.1° | 109.5° |
O4P | C5A | H14 | 109.2° | 109.5° |
O4P | P | O2P | 108.7° | 109.5° |
O4P | P | O1P | 109.9° | 109.5° |
O4P | P | O3P | 110.4° | 109.5° |
O2P | P | O1P | 109.0° | 109.5° |
O2P | P | O3P | 109.2° | 109.5° |
ND | CE | NZ2 | 120.2° | 120.0° |
ND | CE | OZ1 | 120.0° | 120.0° |
CE | ND | H4 | 120.2° | 120.0° |
O1P | P | O3P | 109.5° | 109.5° |
P | O1P | H16 | 109.5° | 114.0° |
P | O3P | H17 | 109.5° | 114.0° |
NZ2 | CE | OZ1 | 119.8° | 120.0° |
CE | NZ2 | H5 | 120.0° | 120.0° |
CE | NZ2 | H6 | 120.0° | 120.0° |
H2 | CB | H3 | 109.5° | 109.5° |
H5 | NZ2 | H6 | 120.0° | 120.0° |
H9 | C2A | H10 | 109.5° | 109.5° |
H9 | C2A | H11 | 109.4° | 109.5° |
H10 | C2A | H11 | 109.5° | 109.5° |
H13 | C5A | H14 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2A | C2 | C3 | O3 | 4.9° | 0.2° |
C2A | C2 | C3 | N1 | 179.0° | 179.8° |
C2A | C2 | C3 | C4 | 178.1° | 179.8° |
C2A | C2 | N1 | C6 | 179.1° | 179.7° |
C2 | C2A | H9 | H10 | 120.0° | 120.0° |
C2 | C2A | H9 | H11 | 120.0° | 120.0° |
C2 | C2A | H10 | H11 | 120.0° | 120.0° |
O | C | OT | CA | 179.8° | 180.0° |
O | C | CA | N | 21.7° | 0.0° |
O | C | CA | CB | 143.8° | 120.0° |
O | C | CA | H1 | 97.4° | 119.9° |
O | C | OT | H7 | 0.0° | 0.0° |
O3 | C3 | C2 | C4 | 176.9° | 180.0° |
O3 | C3 | C2 | N1 | 176.1° | 179.9° |
O3 | C3 | C4 | C4A | 11.5° | 0.1° |
O3 | C3 | C4 | C5 | 175.6° | 180.0° |
C3 | C2 | N1 | C6 | 0.1° | 0.1° |
C2 | C3 | C4 | C4A | 171.5° | 179.9° |
C2 | C3 | C4 | C5 | 1.3° | 0.0° |
C3 | C2 | C2A | H9 | 179.0° | 90.0° |
C3 | C2 | C2A | H10 | 61.0° | 150.0° |
C3 | C2 | C2A | H11 | 59.0° | 29.9° |
C2 | C3 | O3 | H15 | 180.0° | 90.0° |
N1 | C2 | C3 | C4 | 0.9° | 0.0° |
C2 | N1 | C6 | C5 | 0.6° | 0.1° |
C2 | N1 | C6 | H8 | 179.4° | 180.0° |
N1 | C2 | C2A | H9 | 0.0° | 89.8° |
N1 | C2 | C2A | H10 | 120.0° | 30.2° |
N1 | C2 | C2A | H11 | 120.0° | 150.2° |
C3 | C4 | C4A | N | 0.5° | 0.0° |
C3 | C4 | C4A | C5 | 172.7° | 180.0° |
C3 | C4 | C5 | C6 | 0.8° | 0.0° |
C3 | C4 | C5 | C5A | 179.6° | 180.0° |
C3 | C4 | C4A | H12 | 179.6° | 180.0° |
C4 | C3 | O3 | H15 | 3.1° | 90.0° |
OT | C | CA | N | 158.5° | 180.0° |
OT | C | CA | CB | 36.3° | 60.0° |
OT | C | CA | H1 | 82.5° | 60.1° |
C | CA | N | CB | 120.9° | 120.0° |
C | CA | N | H1 | 118.9° | 120.0° |
C | CA | N | C4A | 178.2° | 120.0° |
C | CA | CB | H1 | 119.0° | 120.1° |
C | CA | CB | OG | 61.2° | 55.0° |
C | CA | CB | H2 | 58.9° | 65.0° |
C | CA | CB | H3 | 178.7° | 175.0° |
CA | C | OT | H7 | 179.8° | 180.0° |
N | CA | CB | H1 | 120.6° | 119.9° |
CA | N | C4A | C4 | 179.9° | 180.0° |
N | CA | CB | OG | 59.2° | 65.0° |
N | CA | CB | H2 | 179.3° | 175.0° |
N | CA | CB | H3 | 60.9° | 55.0° |
CA | N | C4A | H12 | 0.1° | 0.1° |
C4A | N | CA | CB | 57.3° | 120.0° |
N | C4A | C4 | H12 | 180.0° | 180.0° |
N | C4A | C4 | C5 | 172.3° | 180.0° |
C4A | N | CA | H1 | 63.0° | 0.0° |
N1 | C6 | C5 | C4 | 0.1° | 0.1° |
N1 | C6 | C5 | H8 | 180.0° | 179.9° |
N1 | C6 | C5 | C5A | 179.5° | 180.0° |
CA | CB | OG | H2 | 120.1° | 119.9° |
CA | CB | OG | H3 | 120.1° | 120.0° |
CA | CB | OG | ND | 148.3° | 180.0° |
CA | CB | H2 | H3 | 119.8° | 120.0° |
C4A | C4 | C5 | C6 | 172.1° | 179.9° |
C4A | C4 | C5 | C5A | 7.5° | 0.0° |
C4 | C5 | C6 | C5A | 179.6° | 179.9° |
C4 | C5 | C5A | O4P | 73.3° | 180.0° |
C4 | C5 | C6 | H8 | 179.9° | 180.0° |
C5 | C4 | C4A | H12 | 7.7° | 0.0° |
C4 | C5 | C5A | H13 | 166.5° | 60.0° |
C4 | C5 | C5A | H14 | 46.9° | 60.0° |
C6 | C5 | C5A | O4P | 107.1° | 0.0° |
C6 | C5 | C5A | H13 | 13.1° | 120.0° |
C6 | C5 | C5A | H14 | 132.7° | 120.1° |
C5 | C5A | O4P | H13 | 120.2° | 120.0° |
C5 | C5A | O4P | H14 | 120.2° | 120.0° |
C5 | C5A | O4P | P | 154.4° | 180.0° |
C5A | C5 | C6 | H8 | 0.5° | 0.1° |
C5 | C5A | H13 | H14 | 119.4° | 120.0° |
CB | OG | ND | CE | 123.1° | 180.0° |
OG | CB | CA | H1 | 179.8° | 175.0° |
OG | CB | H2 | H3 | 119.7° | 120.0° |
CB | OG | ND | H4 | 56.9° | 0.1° |
OG | ND | CE | H4 | 180.0° | 179.9° |
OG | ND | CE | NZ2 | 19.6° | 180.0° |
OG | ND | CE | OZ1 | 160.5° | 0.0° |
ND | OG | CB | H2 | 28.3° | 60.0° |
ND | OG | CB | H3 | 91.6° | 60.0° |
C5A | O4P | P | O2P | 165.4° | 55.0° |
C5A | O4P | P | O1P | 75.3° | 65.0° |
C5A | O4P | P | O3P | 45.5° | 175.0° |
O4P | C5A | H13 | H14 | 119.4° | 120.0° |
O4P | P | O2P | O1P | 119.8° | 120.0° |
O4P | P | O2P | O3P | 120.6° | 120.0° |
O4P | P | O1P | O3P | 121.4° | 120.0° |
P | O4P | C5A | H13 | 85.4° | 60.0° |
P | O4P | C5A | H14 | 34.2° | 60.0° |
O4P | P | O1P | H16 | 119.1° | 60.0° |
O4P | P | O3P | H17 | 119.6° | 180.0° |
O2P | P | O1P | O3P | 119.4° | 120.0° |
O2P | P | O1P | H16 | 0.0° | 179.9° |
O2P | P | O3P | H17 | 0.0° | 60.0° |
ND | CE | NZ2 | OZ1 | 179.9° | 180.0° |
ND | CE | NZ2 | H5 | 179.9° | 0.1° |
ND | CE | NZ2 | H6 | 0.1° | 180.0° |
O1P | P | O3P | H17 | 119.3° | 60.0° |
O3P | P | O1P | H16 | 119.5° | 60.0° |
NZ2 | CE | ND | H4 | 160.4° | 0.1° |
CE | NZ2 | H5 | H6 | 180.0° | 179.9° |
OZ1 | CE | ND | H4 | 19.5° | 180.0° |
OZ1 | CE | NZ2 | H5 | 0.0° | 180.0° |
OZ1 | CE | NZ2 | H6 | 180.0° | 0.1° |
H1 | CA | CB | H2 | 60.1° | 55.1° |
H1 | CA | CB | H3 | 59.8° | 64.9° |
H9 | C2A | H10 | H11 | 120.0° | 120.0° |