Obsolete: PTP

PTP was replaced with THP on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	C2	sing	1.35Å	1.42Å
N1	C6	sing	1.37Å	1.49Å
N1	C1'	sing	1.46Å	1.56Å
C2	O2	doub	1.21Å	1.31Å
C2	N3	sing	1.35Å	1.33Å
N3	C4	sing	1.35Å	1.60Å
N3	HN3	sing	0.97Å	1.02Å
C4	O4	doub	1.22Å	1.39Å
C4	C5	sing	1.41Å	1.42Å
C5	C5M	sing	1.51Å	1.42Å
C5	C6	doub	1.35Å	1.39Å
C5M	H5M1	sing	1.09Å	1.12Å
C5M	H5M2	sing	1.09Å	1.12Å
C5M	H5M3	sing	1.09Å	1.11Å
C6	H6	sing	1.08Å	1.10Å
C1'	C2'	sing	1.54Å	1.60Å
C1'	O4'	sing	1.44Å	1.30Å
C1'	H1'	sing	1.09Å	1.11Å
C2'	C3'	sing	1.55Å	1.63Å
C2'	H2'1	sing	1.09Å	1.11Å
C2'	H2'2	sing	1.09Å	1.12Å
C3'	O3'	sing	1.43Å	1.42Å
C3'	C4'	sing	1.55Å	1.49Å
C3'	H3'	sing	1.09Å	1.12Å
O3'	P3'	sing	1.61Å	1.50Å
P3'	O13	doub	1.48Å	1.68Å
P3'	O23	sing	1.61Å	1.66Å
P3'	O33	sing	1.61Å	1.57Å
O23	H23	sing	0.97Å	0.95Å
O33	H33	sing	0.97Å	0.95Å
C4'	O4'	sing	1.45Å	1.55Å
C4'	C5'	sing	1.53Å	1.55Å
C4'	H4'	sing	1.09Å	1.12Å
C5'	O5'	sing	1.43Å	1.39Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.12Å
O5'	P5'	sing	1.61Å	1.91Å
P5'	O15	doub	1.48Å	1.77Å
P5'	O25	sing	1.61Å	1.56Å
P5'	O35	sing	1.61Å	1.58Å
O25	H25	sing	0.97Å	0.95Å
O35	H35	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N1	C6	119.1°	120.6°
C2	N1	C1'	126.2°	119.7°
N1	C2	O2	118.8°	119.5°
N1	C2	N3	131.0°	120.9°
C6	N1	C1'	114.5°	119.7°
N1	C6	C5	117.4°	119.7°
N1	C6	H6	124.7°	120.1°
N1	C1'	C2'	106.1°	109.8°
N1	C1'	O4'	110.8°	109.9°
N1	C1'	H1'	111.4°	109.9°
O2	C2	N3	110.2°	119.6°
C2	N3	C4	107.3°	120.3°
C2	N3	HN3	119.3°	119.8°
C4	N3	HN3	133.5°	119.9°
N3	C4	O4	114.3°	120.3°
N3	C4	C5	125.5°	119.4°
O4	C4	C5	119.8°	120.3°
C4	C5	C5M	119.4°	120.5°
C4	C5	C6	119.3°	119.1°
C5M	C5	C6	120.7°	120.4°
C5	C5M	H5M1	119.4°	109.4°
C5	C5M	H5M2	108.6°	109.5°
C5	C5M	H5M3	108.7°	109.5°
C5	C6	H6	118.0°	120.2°
H5M1	C5M	H5M2	108.6°	109.4°
H5M1	C5M	H5M3	108.6°	109.5°
H5M2	C5M	H5M3	101.4°	109.5°
C2'	C1'	O4'	111.0°	107.4°
C2'	C1'	H1'	111.2°	109.9°
C1'	C2'	C3'	99.4°	104.2°
C1'	C2'	H2'1	116.1°	110.5°
C1'	C2'	H2'2	116.1°	110.5°
O4'	C1'	H1'	106.5°	109.9°
C1'	O4'	C4'	113.7°	106.9°
C3'	C2'	H2'1	116.1°	110.5°
C3'	C2'	H2'2	116.1°	110.5°
C2'	C3'	O3'	112.3°	110.9°
C2'	C3'	C4'	107.1°	102.1°
C2'	C3'	H3'	109.4°	110.9°
H2'1	C2'	H2'2	94.3°	110.5°
O3'	C3'	C4'	110.0°	110.9°
O3'	C3'	H3'	106.5°	110.9°
C3'	O3'	P3'	121.5°	106.8°
C4'	C3'	H3'	111.7°	110.9°
C3'	C4'	O4'	104.6°	103.6°
C3'	C4'	C5'	109.4°	110.6°
C3'	C4'	H4'	112.5°	110.6°
O3'	P3'	O13	115.4°	109.4°
O3'	P3'	O23	113.6°	109.5°
O3'	P3'	O33	118.1°	109.4°
O13	P3'	O23	100.1°	109.5°
O13	P3'	O33	107.2°	109.5°
O23	P3'	O33	100.0°	109.5°
P3'	O23	H23	113.6°	106.8°
P3'	O33	H33	118.1°	106.8°
O4'	C4'	C5'	109.2°	110.8°
O4'	C4'	H4'	112.8°	110.5°
C5'	C4'	H4'	108.2°	110.6°
C4'	C5'	O5'	102.5°	109.5°
C4'	C5'	H5'1	114.9°	109.5°
C4'	C5'	H5'2	114.9°	109.5°
O5'	C5'	H5'1	114.9°	109.4°
O5'	C5'	H5'2	114.9°	109.4°
C5'	O5'	P5'	114.1°	106.9°
H5'1	C5'	H5'2	95.5°	109.5°
O5'	P5'	O15	109.4°	109.4°
O5'	P5'	O25	108.9°	109.5°
O5'	P5'	O35	100.9°	109.5°
O15	P5'	O25	113.1°	109.4°
O15	P5'	O35	116.5°	109.5°
O25	P5'	O35	107.1°	109.5°
P5'	O25	H25	108.9°	106.9°
P5'	O35	H35	100.9°	106.8°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	N1	C6	C1'	176.0°	180.0°
N1	C2	O2	N3	179.4°	180.0°
N1	C2	N3	C4	0.7°	0.3°
N1	C2	N3	HN3	179.3°	180.0°
C2	N1	C6	C5	1.4°	0.0°
C2	N1	C6	H6	178.7°	180.0°
C2	N1	C1'	C2'	77.3°	59.7°
C2	N1	C1'	O4'	162.2°	58.3°
C2	N1	C1'	H1'	43.9°	179.3°
C6	N1	C2	O2	179.4°	180.0°
C6	N1	C2	N3	1.4°	0.0°
N1	C6	C5	C4	6.2°	0.2°
N1	C6	C5	C5M	177.4°	180.0°
N1	C6	C5	H6	179.9°	180.0°
C6	N1	C1'	C2'	98.4°	120.3°
C6	N1	C1'	O4'	22.1°	121.7°
C6	N1	C1'	H1'	140.5°	0.6°
C1'	N1	C2	O2	3.9°	0.0°
C1'	N1	C2	N3	176.9°	180.0°
C1'	N1	C6	C5	174.6°	180.0°
C1'	N1	C6	H6	5.3°	0.0°
N1	C1'	C2'	O4'	120.4°	119.6°
N1	C1'	C2'	H1'	121.3°	120.9°
N1	C1'	O4'	H1'	121.3°	121.0°
N1	C1'	C2'	C3'	139.6°	121.5°
N1	C1'	C2'	H2'1	95.2°	119.9°
N1	C1'	C2'	H2'2	14.3°	2.8°
N1	C1'	O4'	C4'	129.7°	145.8°
O2	C2	N3	C4	178.6°	179.8°
O2	C2	N3	HN3	1.4°	0.1°
C2	N3	C4	HN3	179.9°	179.7°
C2	N3	C4	O4	178.6°	180.0°
C2	N3	C4	C5	6.0°	0.5°
N3	C4	O4	C5	173.0°	179.5°
N3	C4	C5	C5M	179.6°	179.8°
N3	C4	C5	C6	9.1°	0.5°
HN3	N3	C4	O4	1.4°	0.3°
HN3	N3	C4	C5	174.0°	179.8°
O4	C4	C5	C5M	7.4°	0.3°
O4	C4	C5	C6	178.7°	180.0°
C4	C5	C5M	C6	171.2°	179.7°
C4	C5	C5M	H5M1	180.0°	0.3°
C4	C5	C5M	H5M2	54.8°	119.7°
C4	C5	C5M	H5M3	54.8°	120.3°
C4	C5	C6	H6	173.8°	179.8°
C5	C5M	H5M1	H5M2	125.2°	120.0°
C5	C5M	H5M1	H5M3	125.3°	120.0°
C5	C5M	H5M2	H5M3	114.4°	120.1°
C5M	C5	C6	H6	2.7°	0.0°
C6	C5	C5M	H5M1	8.9°	180.0°
C6	C5	C5M	H5M2	134.1°	60.1°
C6	C5	C5M	H5M3	116.4°	60.0°
H5M1	C5M	H5M2	H5M3	114.3°	120.0°
C2'	C1'	O4'	H1'	121.1°	119.5°
C1'	C2'	C3'	H2'1	125.3°	118.7°
C1'	C2'	C3'	H2'2	125.3°	118.7°
C1'	C2'	H2'1	H2'2	121.9°	122.7°
C1'	C2'	C3'	O3'	101.5°	139.1°
C1'	C2'	C3'	C4'	19.3°	20.9°
C1'	C2'	C3'	H3'	140.5°	97.3°
C2'	C1'	O4'	C4'	12.1°	26.3°
O4'	C1'	C2'	C3'	19.2°	1.9°
O4'	C1'	C2'	H2'1	144.5°	120.6°
O4'	C1'	C2'	H2'2	106.1°	116.7°
C1'	O4'	C4'	C3'	1.4°	39.9°
C1'	O4'	C4'	C5'	115.6°	158.5°
C1'	O4'	C4'	H4'	124.1°	78.6°
H1'	C1'	C2'	C3'	99.2°	117.6°
H1'	C1'	C2'	H2'1	26.1°	1.1°
H1'	C1'	C2'	H2'2	135.6°	123.8°
H1'	C1'	O4'	C4'	109.0°	93.2°
C3'	C2'	H2'1	H2'2	121.8°	122.6°
C2'	C3'	O3'	C4'	119.1°	112.7°
C2'	C3'	O3'	H3'	119.7°	123.6°
C2'	C3'	C4'	H3'	119.7°	118.1°
C2'	C3'	O3'	P3'	162.6°	121.5°
C2'	C3'	C4'	O4'	13.8°	36.9°
C2'	C3'	C4'	C5'	103.1°	155.7°
C2'	C3'	C4'	H4'	136.6°	81.5°
H2'1	C2'	C3'	O3'	23.8°	20.4°
H2'1	C2'	C3'	C4'	144.6°	97.8°
H2'1	C2'	C3'	H3'	94.2°	144.1°
H2'2	C2'	C3'	O3'	133.2°	102.2°
H2'2	C2'	C3'	C4'	106.0°	139.6°
H2'2	C2'	C3'	H3'	15.2°	21.4°
O3'	C3'	C4'	H3'	118.0°	123.7°
C3'	O3'	P3'	O13	179.1°	60.0°
C3'	O3'	P3'	O23	64.4°	180.0°
C3'	O3'	P3'	O33	52.3°	60.0°
O3'	C3'	C4'	O4'	108.5°	155.2°
O3'	C3'	C4'	C5'	134.7°	86.1°
O3'	C3'	C4'	H4'	14.4°	36.7°
C4'	C3'	O3'	P3'	78.2°	125.9°
C3'	C4'	O4'	C5'	117.0°	118.6°
C3'	C4'	O4'	H4'	122.6°	118.5°
C3'	C4'	C5'	H4'	122.9°	122.8°
C3'	C4'	C5'	O5'	166.2°	180.0°
C3'	C4'	C5'	H5'1	68.5°	60.0°
C3'	C4'	C5'	H5'2	41.0°	60.0°
H3'	C3'	O3'	P3'	42.9°	2.1°
H3'	C3'	C4'	O4'	133.5°	81.2°
H3'	C3'	C4'	C5'	16.7°	37.6°
H3'	C3'	C4'	H4'	103.7°	160.4°
O3'	P3'	O13	O23	122.3°	120.0°
O3'	P3'	O13	O33	133.8°	120.0°
O3'	P3'	O23	O33	126.8°	120.0°
O3'	P3'	O23	H23	180.0°	180.0°
O3'	P3'	O33	H33	180.0°	60.0°
O13	P3'	O23	O33	109.6°	120.0°
O13	P3'	O23	H23	56.5°	60.0°
O13	P3'	O33	H33	47.7°	180.0°
O23	P3'	O33	H33	56.3°	60.0°
O33	P3'	O23	H23	53.2°	60.0°
O4'	C4'	C5'	H4'	123.1°	122.9°
O4'	C4'	C5'	O5'	52.3°	65.7°
O4'	C4'	C5'	H5'1	177.6°	174.3°
O4'	C4'	C5'	H5'2	73.0°	54.3°
C4'	C5'	O5'	H5'1	125.3°	120.1°
C4'	C5'	O5'	H5'2	125.3°	120.0°
C4'	C5'	H5'1	H5'2	120.7°	120.0°
C4'	C5'	O5'	P5'	134.3°	180.0°
H4'	C4'	C5'	O5'	70.8°	57.2°
H4'	C4'	C5'	H5'1	54.4°	62.8°
H4'	C4'	C5'	H5'2	163.9°	177.1°
O5'	C5'	H5'1	H5'2	120.7°	119.9°
C5'	O5'	P5'	O15	83.6°	60.0°
C5'	O5'	P5'	O25	152.3°	180.0°
C5'	O5'	P5'	O35	39.8°	60.0°
H5'1	C5'	O5'	P5'	9.0°	59.9°
H5'2	C5'	O5'	P5'	100.4°	60.0°
O5'	P5'	O15	O25	121.6°	120.0°
O5'	P5'	O15	O35	113.6°	120.0°
O5'	P5'	O25	O35	108.3°	120.1°
O5'	P5'	O25	H25	180.0°	180.0°
O5'	P5'	O35	H35	180.0°	60.0°
O15	P5'	O25	O35	129.7°	119.9°
O15	P5'	O25	H25	58.1°	60.1°
O15	P5'	O35	H35	61.6°	180.0°
O25	P5'	O35	H35	66.1°	60.1°
O35	P5'	O25	H25	71.7°	59.9°

Definition date:	1999-07-08
Last modified:	2008-10-14
Release status:	OBS
Processing site:	RCSB
Replaced by:	THP
Derived from:	2SNS